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4Q0N
Asym. Unit
Info
Asym.Unit (330 KB)
Biol.Unit 1 (44 KB)
Biol.Unit 2 (43 KB)
Biol.Unit 3 (43 KB)
Biol.Unit 4 (44 KB)
Biol.Unit 5 (44 KB)
Biol.Unit 6 (43 KB)
Biol.Unit 7 (43 KB)
Biol.Unit 8 (43 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE FIFTH BROMODOMAIN OF HUMAN POLY-BROMODOMAIN CONTAINING PROTEIN 1 (PB1) IN COMPLEX WITH A HYDROXYPHENYL-PROPENONE LIGAND
Authors
:
P. Filippakopoulos, S. Picaud, I. Felletar, S. Martin, O. Monteiro, O. A. Chaikuad, W. Yue, F. Von Delft, C. H. Arrowsmith, A. M. Edwards, C. B S. Knapp, Structural Genomics Consortium (Sgc)
Date
:
02 Apr 14 (Deposition) - 07 May 14 (Release) - 07 May 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.78
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Keywords
:
Pb1, Polybromo 1 Isoform 1, Baf180, Polybromo-1D, Pbrm1, Brg1- Associated Factor 180, Bromodomain, Chromatin Regulator, Dna- Binding, Nucleus, Transcription, Transcription Regulation, Structural Genomics Consortium, Sgc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Filippakopoulos, S. Picaud, I. Felletar, S. Martin, O. Monteiro, O. Fedorov, A. Chaikuad, W. Yue, F. Von Delft, C. H. Arrowsmith, A. M. Edwards, C. Bountra, S. Knapp, Structural Genomics Consortium (Sgc)
Crystal Structure Of The Fifth Bromodomain Of Human Poly-Bromodomain Containing Protein 1 (Pb1) In Complex With A Hydroxyphenyl-Propenone Ligand
To Be Published
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Hetero Components
(2, 17)
Info
All Hetero Components
1a: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDa)
1b: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDb)
1c: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDc)
1d: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDd)
1e: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDe)
1f: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDf)
1g: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDg)
1h: (2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,... (2XDh)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
2XD
8
Ligand/Ion
(2E)-1-(2-HYDROXYPHENYL)-3-(2,4,5,7-TETRAHYDRO-6H-PYRAZOLO[3,4-C]PYRIDIN-6-YL)PROP-2-EN-1-ONE
2
EDO
9
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:700 , ASN A:701 , CYS A:704 , LEU A:718 , HIS A:721 , ARG E:658 , TYR E:665 , HOH E:921
BINDING SITE FOR RESIDUE EDO A 801
02
AC2
SOFTWARE
ILE A:651 , PHE A:652 , PRO A:656 , GLU A:660 , LEU A:661 , TYR A:664 , MET A:672 , ALA A:703 , ASN A:707 , ILE A:713 , HOH A:919
BINDING SITE FOR RESIDUE 2XD A 802
03
AC3
SOFTWARE
ILE B:651 , PHE B:652 , LEU B:655 , TYR B:664 , MET B:672 , ALA B:703 , ASN B:707 , HOH B:909 , HOH B:923 , 2XD D:802
BINDING SITE FOR RESIDUE 2XD B 801
04
AC4
SOFTWARE
ARG C:646 , LYS C:715 , ASP C:716 , HOH C:948 , GLU G:660
BINDING SITE FOR RESIDUE EDO C 801
05
AC5
SOFTWARE
ILE C:651 , PHE C:652 , LEU C:655 , PRO C:656 , TYR C:664 , MET C:672 , ALA C:703 , ASN C:707 , ILE C:713 , HOH C:931
BINDING SITE FOR RESIDUE 2XD C 802
06
AC6
SOFTWARE
PHE D:700 , ASN D:701 , CYS D:704 , LEU D:718 , HIS D:721
BINDING SITE FOR RESIDUE EDO D 801
07
AC7
SOFTWARE
2XD B:801 , ILE D:651 , PHE D:652 , LEU D:655 , PRO D:656 , GLU D:660 , TYR D:664 , MET D:672 , ALA D:703 , ASN D:707 , ILE D:713 , HOH D:917 , HOH D:952
BINDING SITE FOR RESIDUE 2XD D 802
08
AC8
SOFTWARE
ARG A:658 , TYR A:665 , PHE E:700 , ASN E:701 , CYS E:704 , HIS E:721 , HOH E:941
BINDING SITE FOR RESIDUE EDO E 801
09
AC9
SOFTWARE
PRO E:656 , SER E:657 , GLU E:660 , GLU H:710 , LEU H:712 , LYS H:715
BINDING SITE FOR RESIDUE EDO E 802
10
BC1
SOFTWARE
ILE E:651 , PHE E:652 , PRO E:656 , GLU E:660 , TYR E:664 , MET E:672 , ALA E:703 , ASN E:707 , ILE E:713 , HOH E:913 , 2XD H:802
BINDING SITE FOR RESIDUE 2XD E 803
11
BC2
SOFTWARE
HOH A:913 , ILE F:651 , LEU F:712 , ASP F:716 , HOH F:906 , HOH F:931
BINDING SITE FOR RESIDUE EDO F 801
12
BC3
SOFTWARE
ILE A:651 , LEU A:712 , HOH A:911 , HOH A:917 , ILE F:651 , PHE F:652 , LEU F:655 , TYR F:664 , MET F:672 , ALA F:703 , ASN F:707
BINDING SITE FOR RESIDUE 2XD F 802
13
BC4
SOFTWARE
PHE G:700 , ASN G:701 , CYS G:704 , LEU G:718 , HIS G:721 , HOH G:938
BINDING SITE FOR RESIDUE EDO G 801
14
BC5
SOFTWARE
ALA C:650 , ILE C:651 , HOH C:927 , ILE G:651 , ASP G:716 , HOH G:908
BINDING SITE FOR RESIDUE EDO G 802
15
BC6
SOFTWARE
HOH C:903 , ILE G:651 , PHE G:652 , LEU G:655 , TYR G:664 , MET G:672 , MET G:699 , ALA G:703 , ASN G:707 , ILE G:713 , HOH G:903
BINDING SITE FOR RESIDUE 2XD G 803
16
BC7
SOFTWARE
ILE H:651 , ILE H:713 , ASP H:716 , HOH H:908 , HOH H:943 , HOH H:965
BINDING SITE FOR RESIDUE EDO H 801
17
BC8
SOFTWARE
ILE E:651 , LEU E:712 , ILE E:713 , 2XD E:803 , HOH E:934 , ILE H:651 , PHE H:652 , LEU H:655 , TYR H:664 , MET H:672 , ALA H:703 , ASN H:707 , HOH H:915
BINDING SITE FOR RESIDUE 2XD H 802
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Pfam Domains
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Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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wireframe 100
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Asym.Unit (330 KB)
Header - Asym.Unit
Biol.Unit 1 (44 KB)
Header - Biol.Unit 1
Biol.Unit 2 (43 KB)
Header - Biol.Unit 2
Biol.Unit 3 (43 KB)
Header - Biol.Unit 3
Biol.Unit 4 (44 KB)
Header - Biol.Unit 4
Biol.Unit 5 (44 KB)
Header - Biol.Unit 5
Biol.Unit 6 (43 KB)
Header - Biol.Unit 6
Biol.Unit 7 (43 KB)
Header - Biol.Unit 7
Biol.Unit 8 (43 KB)
Header - Biol.Unit 8
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