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4POT
Asym. Unit
Info
Asym.Unit (912 KB)
Biol.Unit 1 (450 KB)
Biol.Unit 2 (452 KB)
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Title
:
STRUCTURE OF HUMAN POLYOMAVIRUS 9 VP1 PENTAMER IN COMPLEX WITH N-GLYCOLYLNEURAMINIC ACID CONTAINING 3'-SIALYLLACTOSAMINE
Authors
:
Z. M. Khan, T. Stehle
Date
:
26 Feb 14 (Deposition) - 09 Apr 14 (Release) - 26 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Jelly Roll Fold, Capsid Formation, Receptor Interaction, Carbohydrate, Sialyloligosaccharide, Viral Coat Protein, Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. M. Khan, Y. Liu, U. Neu, M. Gilbert, B. Ehlers, T. Feizi, T. Stehle
Crystallographic And Glycan Microarray Analysis Of Human Polyomavirus 9 Vp1 Identifies N-Glycolyl Neuraminic Acid As A Receptor Candidate.
J. Virol. V. 88 6100 2014
[
close entry info
]
Hetero Components
(6, 79)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
2a: 1,2-ETHANEDIOL (EDOa)
2aa: 1,2-ETHANEDIOL (EDOaa)
2ab: 1,2-ETHANEDIOL (EDOab)
2ac: 1,2-ETHANEDIOL (EDOac)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
2r: 1,2-ETHANEDIOL (EDOr)
2s: 1,2-ETHANEDIOL (EDOs)
2t: 1,2-ETHANEDIOL (EDOt)
2u: 1,2-ETHANEDIOL (EDOu)
2v: 1,2-ETHANEDIOL (EDOv)
2w: 1,2-ETHANEDIOL (EDOw)
2x: 1,2-ETHANEDIOL (EDOx)
2y: 1,2-ETHANEDIOL (EDOy)
2z: 1,2-ETHANEDIOL (EDOz)
3a: BETA-D-GALACTOSE (GALa)
3b: BETA-D-GALACTOSE (GALb)
3c: BETA-D-GALACTOSE (GALc)
3d: BETA-D-GALACTOSE (GALd)
3e: BETA-D-GALACTOSE (GALe)
3f: BETA-D-GALACTOSE (GALf)
3g: BETA-D-GALACTOSE (GALg)
3h: BETA-D-GALACTOSE (GALh)
3i: BETA-D-GALACTOSE (GALi)
3j: BETA-D-GALACTOSE (GALj)
4a: ISOPROPYL ALCOHOL (IPAa)
4b: ISOPROPYL ALCOHOL (IPAb)
4c: ISOPROPYL ALCOHOL (IPAc)
4d: ISOPROPYL ALCOHOL (IPAd)
4e: ISOPROPYL ALCOHOL (IPAe)
4f: ISOPROPYL ALCOHOL (IPAf)
4g: ISOPROPYL ALCOHOL (IPAg)
4h: ISOPROPYL ALCOHOL (IPAh)
4i: ISOPROPYL ALCOHOL (IPAi)
4j: ISOPROPYL ALCOHOL (IPAj)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
5e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5f: N-ACETYL-D-GLUCOSAMINE (NAGf)
5g: N-ACETYL-D-GLUCOSAMINE (NAGg)
5h: N-ACETYL-D-GLUCOSAMINE (NAGh)
5i: N-ACETYL-D-GLUCOSAMINE (NAGi)
5j: N-ACETYL-D-GLUCOSAMINE (NAGj)
6a: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCa)
6b: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCb)
6c: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCc)
6d: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCd)
6e: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCe)
6f: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCf)
6g: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCg)
6h: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCh)
6i: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCi)
6j: 3,5-DIDEOXY-5-[(HYDROXYACETYL)AMIN... (NGCj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
10
Ligand/Ion
CALCIUM ION
2
EDO
29
Ligand/Ion
1,2-ETHANEDIOL
3
GAL
10
Ligand/Ion
BETA-D-GALACTOSE
4
IPA
10
Ligand/Ion
ISOPROPYL ALCOHOL
5
NAG
10
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
NGC
10
Ligand/Ion
3,5-DIDEOXY-5-[(HYDROXYACETYL)AMINO]-D-GLYCERO-ALPHA-D-GALACTO-NON-2-ULOPYRANOSONIC ACID
[
close Hetero Component info
]
Sites
(59, 59)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:49 , SER B:217 , HOH B:621
BINDING SITE FOR RESIDUE CA A 401
02
AC2
SOFTWARE
GLY A:134 , GLY A:135 , TYR A:137 , TYR A:277 , HOH A:575 , VAL B:74 , ALA B:75 , SER B:76
BINDING SITE FOR RESIDUE EDO A 402
03
AC3
SOFTWARE
VAL A:122 , MET A:238 , GLN A:239 , HOH A:699
BINDING SITE FOR RESIDUE EDO A 403
04
AC4
SOFTWARE
HIS A:154 , PHE A:156 , TYR A:225 , GLY A:226 , SER A:227 , HOH A:699
BINDING SITE FOR RESIDUE IPA A 404
05
AC5
SOFTWARE
GLU B:49 , HOH B:640 , HOH B:698 , SER C:217 , HOH C:549 , HOH C:574
BINDING SITE FOR RESIDUE CA B 401
06
AC6
SOFTWARE
VAL B:122 , HIS B:154 , MET B:238 , GLN B:239 , HOH B:555
BINDING SITE FOR RESIDUE EDO B 402
07
AC7
SOFTWARE
LYS B:119 , ASN B:242 , HOH B:687 , ASN C:219 , GLU C:220 , ARG C:223
BINDING SITE FOR RESIDUE EDO B 403
08
AC8
SOFTWARE
HIS B:154 , PHE B:156 , TYR B:225 , GLY B:226 , SER B:227 , HOH B:555
BINDING SITE FOR RESIDUE IPA B 404
09
AC9
SOFTWARE
GLU C:49 , HOH C:623 , SER D:217 , HOH D:599 , HOH D:682
BINDING SITE FOR RESIDUE CA C 401
10
BC1
SOFTWARE
ARG C:39 , THR C:109 , THR G:109 , EDO G:402
BINDING SITE FOR RESIDUE EDO C 402
11
BC2
SOFTWARE
TYR B:51 , MET B:123 , LYS C:198 , ASP C:215 , SER C:217
BINDING SITE FOR RESIDUE EDO C 403
12
BC3
SOFTWARE
HIS C:154 , MET C:238 , GLN C:239 , HOH C:503 , HOH C:582
BINDING SITE FOR RESIDUE EDO C 404
13
BC4
SOFTWARE
GLY C:134 , GLY C:135 , TYR C:137 , TYR C:277 , HOH C:589 , HOH C:640 , ALA D:75 , SER D:76
BINDING SITE FOR RESIDUE EDO C 405
14
BC5
SOFTWARE
PHE C:156 , TYR C:225 , GLY C:226 , SER C:227
BINDING SITE FOR RESIDUE IPA C 406
15
BC6
SOFTWARE
GLU D:49 , SER E:217 , HOH E:582
BINDING SITE FOR RESIDUE CA D 401
16
BC7
SOFTWARE
GLU D:220 , ASN D:221 , ARG D:223 , ASP D:250 , GLY D:255 , HOH D:683
BINDING SITE FOR RESIDUE EDO D 402
17
BC8
SOFTWARE
ARG D:39 , THR D:109 , VAL D:298 , ARG F:39 , ASP F:108 , THR F:109
BINDING SITE FOR RESIDUE EDO D 403
18
BC9
SOFTWARE
HIS D:154 , MET D:238 , GLN D:239 , HOH D:518
BINDING SITE FOR RESIDUE EDO D 404
19
CC1
SOFTWARE
GLY D:140 , SER D:141 , SER D:142 , SER E:278 , GLU E:279
BINDING SITE FOR RESIDUE EDO D 405
20
CC2
SOFTWARE
HIS D:154 , PHE D:156 , GLY D:226 , SER D:227 , HOH D:518
BINDING SITE FOR RESIDUE IPA D 406
21
CC3
SOFTWARE
SER A:217 , HOH A:524 , HOH A:658 , GLU E:49 , HOH E:501
BINDING SITE FOR RESIDUE CA E 401
22
CC4
SOFTWARE
TYR D:51 , GLN E:166 , LYS E:198 , SER E:217
BINDING SITE FOR RESIDUE EDO E 402
23
CC5
SOFTWARE
HIS E:154 , MET E:238 , GLN E:239 , HOH E:659
BINDING SITE FOR RESIDUE EDO E 403
24
CC6
SOFTWARE
HIS E:154 , PHE E:156 , GLY E:226 , SER E:227 , HOH E:613 , HOH E:659
BINDING SITE FOR RESIDUE IPA E 404
25
CC7
SOFTWARE
GLU F:49 , SER G:217 , HOH G:596 , HOH G:692
BINDING SITE FOR RESIDUE CA F 401
26
CC8
SOFTWARE
GLU F:220 , ASN F:221 , ARG F:223 , ASP F:250 , GLY F:255
BINDING SITE FOR RESIDUE EDO F 402
27
CC9
SOFTWARE
HIS F:154 , MET F:238 , GLN F:239 , HOH F:530
BINDING SITE FOR RESIDUE EDO F 403
28
DC1
SOFTWARE
GLY F:134 , GLY F:135 , TYR F:137 , TYR F:277 , HOH F:592 , ALA G:75 , SER G:76
BINDING SITE FOR RESIDUE EDO F 404
29
DC2
SOFTWARE
PHE F:156 , SER F:227 , ARG F:288
BINDING SITE FOR RESIDUE IPA F 405
30
DC3
SOFTWARE
GLU G:49 , SER H:217 , HOH H:620 , HOH H:658
BINDING SITE FOR RESIDUE CA G 401
31
DC4
SOFTWARE
THR C:109 , EDO C:402 , ARG G:39 , THR G:109
BINDING SITE FOR RESIDUE EDO G 402
32
DC5
SOFTWARE
GLY G:134 , GLY G:135 , TYR G:137 , TYR G:277 , HOH G:534 , VAL H:74 , ALA H:75 , SER H:76
BINDING SITE FOR RESIDUE EDO G 403
33
DC6
SOFTWARE
THR B:62 , GLU B:64 , TYR G:137 , TYR G:277 , HOH G:668 , HOH G:680
BINDING SITE FOR RESIDUE EDO G 404
34
DC7
SOFTWARE
TYR F:51 , TYR F:289 , LEU G:193 , LYS G:198 , SER G:217 , HOH G:732
BINDING SITE FOR RESIDUE EDO G 405
35
DC8
SOFTWARE
VAL G:122 , HIS G:154 , MET G:238 , GLN G:239 , HOH G:591 , HOH G:667
BINDING SITE FOR RESIDUE EDO G 406
36
DC9
SOFTWARE
HIS G:154 , TYR G:225 , GLY G:226 , SER G:227 , HOH G:591 , HOH G:666
BINDING SITE FOR RESIDUE IPA G 407
37
EC1
SOFTWARE
GLU H:49 , HOH H:647 , HOH H:732 , SER I:217 , GLU I:220 , HOH I:728
BINDING SITE FOR RESIDUE CA H 401
38
EC2
SOFTWARE
VAL H:122 , MET H:238 , GLN H:239 , HOH H:521 , HOH H:683
BINDING SITE FOR RESIDUE EDO H 402
39
EC3
SOFTWARE
TYR G:51 , TYR G:289 , LYS H:198 , SER H:217
BINDING SITE FOR RESIDUE EDO H 403
40
EC4
SOFTWARE
HIS H:154 , PHE H:156 , GLY H:226 , SER H:227 , HOH H:521
BINDING SITE FOR RESIDUE IPA H 404
41
EC5
SOFTWARE
GLU I:49 , SER J:217 , HOH J:529
BINDING SITE FOR RESIDUE CA I 401
42
EC6
SOFTWARE
MET I:238 , GLN I:239 , HOH I:667 , HOH I:679
BINDING SITE FOR RESIDUE EDO I 402
43
EC7
SOFTWARE
GLY I:140 , SER I:141 , SER I:142 , SER J:278 , GLU J:279
BINDING SITE FOR RESIDUE EDO I 403
44
EC8
SOFTWARE
HIS I:154 , TYR I:225 , GLY I:226 , SER I:227 , HOH I:679
BINDING SITE FOR RESIDUE IPA I 404
45
EC9
SOFTWARE
SER F:217 , HOH F:580 , HOH F:627 , HOH F:628 , GLU J:49
BINDING SITE FOR RESIDUE CA J 401
46
FC1
SOFTWARE
TYR I:51 , TYR I:289 , GLN J:166 , LYS J:198 , SER J:217
BINDING SITE FOR RESIDUE EDO J 402
47
FC2
SOFTWARE
HOH F:688 , LEU J:101 , ASN J:102 , MET J:105 , GLY J:260 , ASP J:261
BINDING SITE FOR RESIDUE EDO J 403
48
FC3
SOFTWARE
MET J:238 , GLN J:239 , HOH J:620
BINDING SITE FOR RESIDUE EDO J 404
49
FC4
SOFTWARE
HIS J:154 , PHE J:156 , TYR J:225 , SER J:227 , HOH J:620
BINDING SITE FOR RESIDUE IPA J 405
50
FC5
SOFTWARE
LEU A:65 , TYR A:68 , ASP A:71 , GLN A:133 , GLY A:134 , HIS A:274 , ASN A:276 , TYR A:277 , ASN A:282 , HOH A:515 , HOH A:518 , HOH A:565 , HOH A:575 , HOH A:592 , HOH A:632 , HOH A:648 , SER B:77 , LYS B:78
BINDING SITE FOR CHAIN A OF POLYSACCHARIDE RESIDUES 405 TO 407
51
FC6
SOFTWARE
TYR B:68 , ASP B:71 , GLN B:133 , GLY B:134 , HIS B:274 , ASN B:276 , TYR B:277 , ASN B:282 , HOH B:527 , HOH B:528 , HOH B:535 , HOH B:591 , HOH B:595 , HOH B:601 , HOH B:617 , HOH B:647 , HOH B:666 , HOH B:671 , HOH B:721 , SER C:76 , SER C:77 , LYS C:78
BINDING SITE FOR CHAIN B OF POLYSACCHARIDE RESIDUES 405 TO 407
52
FC7
SOFTWARE
LEU C:65 , TYR C:68 , ASP C:71 , GLN C:133 , GLY C:134 , HIS C:274 , ASN C:276 , TYR C:277 , ASN C:282 , HOH C:525 , HOH C:548 , HOH C:583 , HOH C:589 , HOH C:590 , HOH C:641 , HOH C:658 , HOH C:664 , HOH C:667 , HOH C:701 , HOH C:720 , HOH C:724 , HOH C:729 , SER D:76 , SER D:77 , LYS D:78 , HOH D:591 , ARG G:55 , ASN G:59 , ASN G:60 , PRO G:61 , ASP G:204
BINDING SITE FOR CHAIN C OF POLYSACCHARIDE RESIDUES 407 TO 409
53
FC8
SOFTWARE
LEU D:65 , TYR D:68 , ASP D:71 , GLN D:133 , GLY D:134 , HIS D:274 , ASN D:276 , TYR D:277 , ASN D:282 , HOH D:524 , HOH D:553 , HOH D:565 , HOH D:597 , HOH D:609 , HOH D:611 , HOH D:654 , HOH D:709 , HOH D:710 , HOH D:723 , SER E:76 , SER E:77 , LYS E:78 , HOH E:612 , MET G:105
BINDING SITE FOR CHAIN D OF POLYSACCHARIDE RESIDUES 407 TO 409
54
FC9
SOFTWARE
SER A:76 , SER A:77 , LYS A:78 , HOH A:503 , LEU E:65 , TYR E:68 , ASP E:71 , GLN E:133 , GLY E:134 , HIS E:274 , ASN E:276 , TYR E:277 , ASN E:282 , HOH E:539 , HOH E:540 , HOH E:560 , HOH E:567 , HOH E:579 , HOH E:619 , HOH E:635 , HOH E:651 , HOH E:692 , GLU H:49 , HOH I:728
BINDING SITE FOR CHAIN E OF POLYSACCHARIDE RESIDUES 405 TO 407
55
GC1
SOFTWARE
LEU F:65 , TYR F:68 , ASP F:71 , GLN F:133 , GLY F:134 , HIS F:274 , ASN F:276 , TYR F:277 , ASN F:282 , HOH F:517 , HOH F:524 , HOH F:532 , HOH F:568 , HOH F:570 , HOH F:589 , HOH F:592 , HOH F:593 , HOH F:633 , HOH F:644 , HOH F:645 , HOH F:703 , SER G:76 , SER G:77 , LYS G:78 , HOH G:718
BINDING SITE FOR CHAIN F OF POLYSACCHARIDE RESIDUES 406 TO 408
56
GC2
SOFTWARE
LEU G:65 , TYR G:68 , ASP G:71 , GLN G:133 , GLY G:134 , HIS G:274 , ASN G:276 , TYR G:277 , ASN G:282 , HOH G:514 , HOH G:526 , HOH G:533 , HOH G:534 , HOH G:543 , HOH G:544 , HOH G:555 , HOH G:592 , HOH G:629 , HOH G:647 , HOH G:721 , SER H:76 , LYS H:78 , HOH H:698
BINDING SITE FOR CHAIN G OF POLYSACCHARIDE RESIDUES 408 TO 410
57
GC3
SOFTWARE
LEU H:65 , TYR H:68 , ASP H:71 , GLN H:133 , GLY H:134 , HIS H:274 , ASN H:276 , TYR H:277 , ASN H:282 , HOH H:512 , HOH H:529 , HOH H:553 , HOH H:565 , HOH H:569 , HOH H:579 , HOH H:601 , HOH H:611 , HOH H:621 , HOH H:625 , HOH H:646 , HOH H:689 , SER I:76 , SER I:77 , LYS I:78
BINDING SITE FOR CHAIN H OF POLYSACCHARIDE RESIDUES 405 TO 407
58
GC4
SOFTWARE
LEU I:65 , TYR I:68 , ASP I:71 , GLN I:133 , GLY I:134 , HIS I:274 , ASN I:276 , TYR I:277 , ASN I:282 , HOH I:515 , HOH I:516 , HOH I:545 , HOH I:554 , HOH I:567 , HOH I:590 , HOH I:642 , HOH I:643 , HOH I:690 , HOH I:706 , HOH I:720 , SER J:76 , SER J:77 , LYS J:78 , HOH J:606
BINDING SITE FOR CHAIN I OF POLYSACCHARIDE RESIDUES 405 TO 407
59
GC5
SOFTWARE
GLU B:103 , SER F:76 , SER F:77 , LYS F:78 , HOH F:529 , ASP H:108 , LEU J:65 , TYR J:68 , ASP J:71 , GLN J:133 , GLY J:134 , HIS J:274 , ASN J:276 , TYR J:277 , ASN J:282 , HOH J:521 , HOH J:549 , HOH J:550 , HOH J:560 , HOH J:564 , HOH J:574 , HOH J:635 , HOH J:636 , HOH J:664 , HOH J:719
BINDING SITE FOR CHAIN J OF POLYSACCHARIDE RESIDUES 406 TO 408
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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[
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]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d4pota_ (A:)
1b: SCOP_d4potb_ (B:)
1c: SCOP_d4potc_ (C:)
1d: SCOP_d4potd_ (D:)
1e: SCOP_d4pote_ (E:)
1f: SCOP_d4potf_ (F:)
1g: SCOP_d4potg_ (G:)
1h: SCOP_d4poth_ (H:)
1i: SCOP_d4poti_ (I:)
1j: SCOP_d4potj_ (J:)
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Families
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Protein Domains
(
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(
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Organisms
(
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Nucleoplasmin-like/VP (viral coat and capsid proteins)
(278)
Superfamily
:
Group I dsDNA viruses
(30)
Family
:
Papovaviridae-like VP
(19)
Protein domain
:
automated matches
(12)
Human polyomavirus 9 [TaxId: 943908]
(7)
1a
d4pota_
A:
1b
d4potb_
B:
1c
d4potc_
C:
1d
d4potd_
D:
1e
d4pote_
E:
1f
d4potf_
F:
1g
d4potg_
G:
1h
d4poth_
H:
1i
d4poti_
I:
1j
d4potj_
J:
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CATH Domains
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Asymmetric Unit 1
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select residue range 5 to 10 in chain 'A'
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