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Asym. Unit
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Asym.Unit (270 KB)
Biol.Unit 1 (262 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ANTIBODY VRC07-G54H IN COMPLEX WITH CLADE A/E 93TH057 HIV-1 GP120 CORE
Authors
:
Y. D. Kwon, P. D. Kwong
Date
:
25 Jan 14 (Deposition) - 03 Sep 14 (Release) - 22 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.71
Chains
:
Asym. Unit : G,H,L
Biol. Unit 1: G,H,L (1x)
Keywords
:
Vrc07 Antibody, Passive Transfer, Neutralization, In Vivo Protection, Autoreactivity, Lentiviral Infection, Enhanced Potency, Hiv-1 Gp120, Vrc07-G54H, Viral Protein-Immune System Complex
(Keyword Search:
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Reference
:
R. S. Rudicell, Y. D. Kwon, S. Y. Ko, A. Pegu, M. K. Louder, I. S. Georgiev X. Wu, J. Zhu, J. C. Boyington, X. Chen, W. Shi, Z. Y. Yang, N. A. Doria-Rose, K. Mckee, S. O'Dell, S. D. Schmidt, G. Y. Chuang, A. Druz, C. Soto, Y. Yang, B. Zhang, T. Zhou, J. P. Todd, K. E. Lloyd, J. Eudailey, K. E. Roberts, B. R. Donald, R. T. Bailer, J. Ledgerwood, J. C. Mullikin, L. Shapiro, R. A. Koup, B. S. Graham, M. C. Nason, M. Connors, B. F. Haynes, S. S. Rao, M. Roederer, P. D. Kwong, J. R. Mascola, G. J. Nabel
Enhanced Potency Of A Broadly Neutralizing Hiv-1 Antibody I Vitro Improves Protection Against Lentiviral Infection In Vivo.
J. Virol. V. 88 12669 2014
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Hetero Components
(1, 10)
Info
All Hetero Components
1a: N-ACETYL-D-GLUCOSAMINE (NAGa)
1b: N-ACETYL-D-GLUCOSAMINE (NAGb)
1c: N-ACETYL-D-GLUCOSAMINE (NAGc)
1d: N-ACETYL-D-GLUCOSAMINE (NAGd)
1e: N-ACETYL-D-GLUCOSAMINE (NAGe)
1f: N-ACETYL-D-GLUCOSAMINE (NAGf)
1g: N-ACETYL-D-GLUCOSAMINE (NAGg)
1h: N-ACETYL-D-GLUCOSAMINE (NAGh)
1i: N-ACETYL-D-GLUCOSAMINE (NAGi)
1j: N-ACETYL-D-GLUCOSAMINE (NAGj)
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No.
Name
Count
Type
Full Name
1
NAG
10
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN G:234 , THR G:236 , LEU G:277 , HIS G:352 , GLN H:192
BINDING SITE FOR RESIDUE NAG G 501
02
AC2
SOFTWARE
ASP G:230 , LYS G:231 , ASN G:232 , ASN G:241
BINDING SITE FOR RESIDUE NAG G 502
03
AC3
SOFTWARE
ASN G:262 , ARG G:379 , CYS G:445 , VAL G:446 , SER G:447 , NAG G:510 , HOH G:602
BINDING SITE FOR RESIDUE NAG G 503
04
AC4
SOFTWARE
GLU G:275 , ASN G:276 , SER L:30 , TYR L:91 , HOH L:301
BINDING SITE FOR RESIDUE NAG G 504
05
AC5
SOFTWARE
GLU G:268 , GLU G:269 , ILE G:270 , ASN G:289 , GLN G:344 , LYS G:348
BINDING SITE FOR RESIDUE NAG G 505
06
AC6
SOFTWARE
ASN G:295 , THR G:297 , TYR G:330 , GLU G:332 , HOH G:607
BINDING SITE FOR RESIDUE NAG G 506
07
AC7
SOFTWARE
ASN G:334 , LYS G:337 , THR G:413
BINDING SITE FOR RESIDUE NAG G 507
08
AC8
SOFTWARE
GLN G:117 , ASN G:386 , THR G:388
BINDING SITE FOR RESIDUE NAG G 508
09
AC9
SOFTWARE
GLN G:389 , ASN G:392 , CYS G:395 , CYS G:410
BINDING SITE FOR RESIDUE NAG G 509
10
BC1
SOFTWARE
LYS G:252 , SER G:291 , ASN G:448 , NAG G:503
BINDING SITE FOR RESIDUE NAG G 510
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SAPs(SNPs)/Variants
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SCOP Domains
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CATH Domains
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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