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4O6N
Asym. Unit
Info
Asym.Unit (223 KB)
Biol.Unit 1 (216 KB)
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(1)
Title
:
STRUCTURE OF AF2299, A CDP-ALCOHOL PHOSPHOTRANSFERASE (CDP-BOUND)
Authors
:
O. B. Clarke, G. Sciara, D. Tomasek, S. Banerjee, K. R. Rajashankar, L. S F. Mancia, New York Consortium On Membrane Protein Structure
Date
:
22 Dec 13 (Deposition) - 14 May 14 (Release) - 13 Aug 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Cdp-Alcohol Phosphotransferase, Membrane Protein, Structural Genomics, Psi-Biology, New York Consortium On Membrane Protein Structure, Nycomps, Membrane, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Sciara, O. B. Clarke, D. Tomasek, B. Kloss, S. Tabuso, R. Byfield, R. Cohn, S. Banerjee, K. R. Rajashankar, V. Slavkovic, J. H. Graziano, L. Shapiro, F. Mancia
Structural Basis For Catalysis In A Cdp-Alcohol Phosphotransferase.
Nat Commun V. 5 4068 2014
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Hetero Components
(4, 17)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: CYTIDINE-5'-DIPHOSPHATE (CDPa)
2b: CYTIDINE-5'-DIPHOSPHATE (CDPb)
3a: 1-MONOOLEOYL-RAC-GLYCEROL (MPGa)
3b: 1-MONOOLEOYL-RAC-GLYCEROL (MPGb)
3c: 1-MONOOLEOYL-RAC-GLYCEROL (MPGc)
3d: 1-MONOOLEOYL-RAC-GLYCEROL (MPGd)
3e: 1-MONOOLEOYL-RAC-GLYCEROL (MPGe)
3f: 1-MONOOLEOYL-RAC-GLYCEROL (MPGf)
3g: 1-MONOOLEOYL-RAC-GLYCEROL (MPGg)
3h: 1-MONOOLEOYL-RAC-GLYCEROL (MPGh)
3i: 1-MONOOLEOYL-RAC-GLYCEROL (MPGi)
4a: L(+)-TARTARIC ACID (TLAa)
4b: L(+)-TARTARIC ACID (TLAb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
CDP
2
Ligand/Ion
CYTIDINE-5'-DIPHOSPHATE
3
MPG
9
Ligand/Ion
1-MONOOLEOYL-RAC-GLYCEROL
4
TLA
2
Ligand/Ion
L(+)-TARTARIC ACID
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:214 , ASP A:217 , ASP A:235 , CDP A:403
BINDING SITE FOR RESIDUE CA A 401
02
AC2
SOFTWARE
ASP A:214 , ASP A:235 , ASP A:239 , HOH A:503
BINDING SITE FOR RESIDUE CA A 402
03
AC3
SOFTWARE
ARG A:157 , PRO A:174 , ASN A:175 , THR A:178 , ASP A:214 , GLY A:215 , ASP A:217 , GLY A:218 , ARG A:222 , GLU A:227 , SER A:228 , GLY A:231 , ALA A:232 , ASP A:235 , CA A:401 , TLA A:409 , HOH A:507 , HOH A:509
BINDING SITE FOR RESIDUE CDP A 403
04
AC4
SOFTWARE
VAL A:314 , LEU A:316
BINDING SITE FOR RESIDUE MPG A 404
05
AC5
SOFTWARE
GLN A:176 , MPG A:408
BINDING SITE FOR RESIDUE MPG A 405
06
AC6
SOFTWARE
PHE A:180
BINDING SITE FOR RESIDUE MPG A 406
07
AC7
SOFTWARE
VAL A:179
BINDING SITE FOR RESIDUE MPG A 407
08
AC8
SOFTWARE
VAL A:179 , MPG A:405
BINDING SITE FOR RESIDUE MPG A 408
09
AC9
SOFTWARE
ARG A:240 , ILE A:275 , THR A:300 , ARG A:301 , ARG A:304 , CDP A:403
BINDING SITE FOR RESIDUE TLA A 409
10
BC1
SOFTWARE
ASP B:214 , ASP B:217 , ASP B:235 , CDP B:403
BINDING SITE FOR RESIDUE CA B 401
11
BC2
SOFTWARE
ASP B:214 , ASP B:235 , ASP B:239 , HOH B:527
BINDING SITE FOR RESIDUE CA B 402
12
BC3
SOFTWARE
LYS B:136 , TYR B:146 , ARG B:157 , PRO B:174 , ASN B:175 , THR B:178 , ASP B:214 , GLY B:215 , ASP B:217 , GLY B:218 , ARG B:222 , GLU B:227 , SER B:228 , GLY B:231 , ALA B:232 , ASP B:235 , CA B:401 , HOH B:533 , HOH B:541 , HOH B:548 , HOH B:555
BINDING SITE FOR RESIDUE CDP B 403
13
BC4
SOFTWARE
LEU B:167 , VAL B:172 , MPG B:405
BINDING SITE FOR RESIDUE MPG B 404
14
BC5
SOFTWARE
GLN B:176 , MPG B:404 , MPG B:406
BINDING SITE FOR RESIDUE MPG B 405
15
BC6
SOFTWARE
MPG B:405
BINDING SITE FOR RESIDUE MPG B 406
16
BC7
SOFTWARE
VAL B:322 , LEU B:326
BINDING SITE FOR RESIDUE MPG B 407
17
BC8
SOFTWARE
TYR B:146 , ARG B:240 , ILE B:275 , ALA B:276 , THR B:300 , ARG B:301 , ARG B:304
BINDING SITE FOR RESIDUE TLA B 408
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (223 KB)
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