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4O2A
Asym. Unit
Info
Asym.Unit (754 KB)
Biol.Unit 1 (740 KB)
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(1)
Title
:
TUBULIN-BAL27862 COMPLEX
Authors
:
A. E. Prota, D. Franck, F. Bachmann, K. Bargsten, R. M. Buey, J. Pohlmann S. Reinelt, H. Lane, M. O. Steinmetz
Date
:
17 Dec 13 (Deposition) - 05 Mar 14 (Release) - 16 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Alpha-Tubulin, Beta-Tubulin, Ligase, Gtpase, Microtubule, Stathmin, Bal27862, Cell Cycle, Tubulin Fold, Cytoskeleton, Cell Cycle- Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. E. Prota, F. Danel, F. Bachmann, K. Bargsten, R. M. Buey, J. Pohlmann S. Reinelt, H. Lane, M. O. Steinmetz
The Novel Microtubule-Destabilizing Drug Bal27862 Binds To The Colchicine Site Of Tubulin With Distinct Effects On Microtubule Organization.
J. Mol. Biol. V. 426 1848 2014
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Hetero Components
(10, 20)
Info
All Hetero Components
01a: 3-[(4-{1-[2-(4-AMINOPHENYL)-2-OXOE... (2RRa)
01b: 3-[(4-{1-[2-(4-AMINOPHENYL)-2-OXOE... (2RRb)
02a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
03a: CALCIUM ION (CAa)
03b: CALCIUM ION (CAb)
03c: CALCIUM ION (CAc)
03d: CALCIUM ION (CAd)
04a: CHLORIDE ION (CLa)
05a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
05b: GUANOSINE-5'-DIPHOSPHATE (GDPb)
06a: GLYCEROL (GOLa)
07a: GUANOSINE-5'-TRIPHOSPHATE (GTPa)
07b: GUANOSINE-5'-TRIPHOSPHATE (GTPb)
08a: IMIDAZOLE (IMDa)
09a: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESa)
10a: MAGNESIUM ION (MGa)
10b: MAGNESIUM ION (MGb)
10c: MAGNESIUM ION (MGc)
10d: MAGNESIUM ION (MGd)
10e: MAGNESIUM ION (MGe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
2RR
2
Ligand/Ion
3-[(4-{1-[2-(4-AMINOPHENYL)-2-OXOETHYL]-1H-BENZIMIDAZOL-2-YL}-1,2,5-OXADIAZOL-3-YL)AMINO]PROPANENITRILE
2
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
3
CA
4
Ligand/Ion
CALCIUM ION
4
CL
1
Ligand/Ion
CHLORIDE ION
5
GDP
2
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
6
GOL
1
Ligand/Ion
GLYCEROL
7
GTP
2
Ligand/Ion
GUANOSINE-5'-TRIPHOSPHATE
8
IMD
1
Ligand/Ion
IMIDAZOLE
9
MES
1
Ligand/Ion
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
10
MG
5
Ligand/Ion
MAGNESIUM ION
[
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]
Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:10 , GLN A:11 , ALA A:12 , GLN A:15 , ASP A:98 , ALA A:99 , ASN A:101 , SER A:140 , GLY A:143 , GLY A:144 , THR A:145 , GLY A:146 , VAL A:177 , SER A:178 , THR A:179 , GLU A:183 , ASN A:206 , TYR A:224 , ASN A:228 , ILE A:231 , MG A:502 , HOH A:602 , HOH A:603 , HOH A:630 , HOH A:631 , HOH A:632 , HOH A:633 , LYS B:254
BINDING SITE FOR RESIDUE GTP A 501
02
AC2
SOFTWARE
GTP A:501 , HOH A:630 , HOH A:631 , HOH A:632 , HOH A:633
BINDING SITE FOR RESIDUE MG A 502
03
AC3
SOFTWARE
ASP A:39 , THR A:41 , GLY A:44 , GLU A:55
BINDING SITE FOR RESIDUE CA A 503
04
AC4
SOFTWARE
TYR A:161 , GLY A:162 , LYS A:163 , LYS A:164
BINDING SITE FOR RESIDUE CL A 504
05
AC5
SOFTWARE
ARG A:105 , THR A:109 , GLY A:410 , GLU A:411 , HOH A:640 , MES B:505
BINDING SITE FOR RESIDUE GOL A 505
06
AC6
SOFTWARE
HIS A:406 , GLY A:410 , MES B:505
BINDING SITE FOR RESIDUE IMD A 506
07
AC7
SOFTWARE
GLY B:10 , GLN B:11 , CYS B:12 , GLN B:15 , SER B:140 , GLY B:143 , GLY B:144 , THR B:145 , GLY B:146 , VAL B:177 , ASP B:179 , GLU B:183 , ASN B:206 , TYR B:224 , ASN B:228 , MG B:502 , HOH B:601 , HOH B:602 , HOH B:608 , HOH B:610 , HOH B:639
BINDING SITE FOR RESIDUE GDP B 501
08
AC8
SOFTWARE
GLN B:11 , GDP B:501 , MG B:506 , HOH B:639
BINDING SITE FOR RESIDUE MG B 502
09
AC9
SOFTWARE
GLU B:113
BINDING SITE FOR RESIDUE CA B 503
10
BC1
SOFTWARE
SER A:178 , THR A:179 , TYR B:202 , VAL B:238 , CYS B:241 , LEU B:248 , ALA B:250 , LEU B:255 , ASN B:258 , MET B:259 , VAL B:315 , ALA B:316 , ILE B:318 , ASN B:349 , ASN B:350 , LYS B:352 , ILE B:378
BINDING SITE FOR RESIDUE 2RR B 504
11
BC2
SOFTWARE
GOL A:505 , IMD A:506 , ARG B:158 , PRO B:162 , ASP B:163 , ARG B:164 , ASN B:197 , ASP B:199 , ARG B:253
BINDING SITE FOR RESIDUE MES B 505
12
BC3
SOFTWARE
GLN B:11 , MG B:502 , HOH B:639 , HOH B:640 , GLU C:254 , HOH C:697
BINDING SITE FOR RESIDUE MG B 506
13
BC4
SOFTWARE
GLY C:10 , GLN C:11 , ALA C:12 , GLN C:15 , ASP C:98 , ALA C:99 , ALA C:100 , ASN C:101 , SER C:140 , GLY C:143 , GLY C:144 , THR C:145 , GLY C:146 , ILE C:171 , SER C:178 , GLU C:183 , ASN C:206 , TYR C:224 , ASN C:228 , ILE C:231 , HOH C:601 , HOH C:604 , HOH C:607 , HOH C:608 , LYS D:254 , MG D:601
BINDING SITE FOR RESIDUE GTP C 501
14
BC5
SOFTWARE
ASP C:39 , THR C:41 , GLY C:44 , GLU C:55
BINDING SITE FOR RESIDUE CA C 502
15
BC6
SOFTWARE
GTP C:501 , HOH C:601 , HOH C:604 , HOH C:608 , HOH C:719 , LYS D:254
BINDING SITE FOR RESIDUE MG D 601
16
BC7
SOFTWARE
GLY D:10 , GLN D:11 , CYS D:12 , GLN D:15 , SER D:140 , GLY D:143 , GLY D:144 , THR D:145 , GLY D:146 , VAL D:177 , SER D:178 , GLU D:183 , ASN D:206 , TYR D:224 , ASN D:228 , MG D:603 , HOH D:701 , HOH D:703
BINDING SITE FOR RESIDUE GDP D 602
17
BC8
SOFTWARE
GLN D:11 , GDP D:602 , HOH D:709 , HOH D:713
BINDING SITE FOR RESIDUE MG D 603
18
BC9
SOFTWARE
ASN C:101 , THR C:179 , ALA C:180 , VAL C:181 , TYR D:202 , VAL D:238 , CYS D:241 , LEU D:248 , ALA D:250 , LEU D:255 , ASN D:258 , MET D:259 , VAL D:315 , ALA D:316 , ILE D:318 , ASN D:349 , ASN D:350 , LYS D:352 , ILE D:378
BINDING SITE FOR RESIDUE 2RR D 604
19
CC1
SOFTWARE
HOH A:650 , HOH A:651 , ASP E:44
BINDING SITE FOR RESIDUE CA E 700
20
CC2
SOFTWARE
LYS F:74 , LYS F:150 , GLN F:183 , LYS F:184 , TYR F:185 , LEU F:186 , LYS F:198 , THR F:241 , ILE F:330 , GLU F:331
BINDING SITE FOR RESIDUE ADP F 401
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 9)
Info
All SCOP Domains
1a: SCOP_d4o2ae_ (E:)
2a: SCOP_d4o2aa2 (A:246-437)
2b: SCOP_d4o2ab2 (B:246-438)
2c: SCOP_d4o2ac2 (C:246-440)
2d: SCOP_d4o2ad2 (D:246-441)
3a: SCOP_d4o2aa1 (A:1-245)
3b: SCOP_d4o2ab1 (B:1-245)
3c: SCOP_d4o2ac1 (C:1-245)
3d: SCOP_d4o2ad1 (D:1-245)
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Classes
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(
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Folds
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(
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Superfamilies
(
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(
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Families
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Non-globular all-alpha subunits of globular proteins
(135)
Superfamily
:
Stathmin
(21)
Family
:
Stathmin
(21)
Protein domain
:
Stathmin 4
(21)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(21)
1a
d4o2ae_
E:
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Bacillus chorismate mutase-like
(324)
Superfamily
:
Tubulin C-terminal domain-like
(76)
Family
:
Tubulin, C-terminal domain
(69)
Protein domain
:
automated matches
(19)
Cow (Bos taurus) [TaxId: 9913]
(11)
2a
d4o2aa2
A:246-437
2b
d4o2ab2
B:246-438
2c
d4o2ac2
C:246-440
2d
d4o2ad2
D:246-441
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Tubulin nucleotide-binding domain-like
(75)
Superfamily
:
Tubulin nucleotide-binding domain-like
(75)
Family
:
Tubulin, GTPase domain
(69)
Protein domain
:
automated matches
(20)
Cow (Bos taurus) [TaxId: 9913]
(11)
3a
d4o2aa1
A:1-245
3b
d4o2ab1
B:1-245
3c
d4o2ac1
C:1-245
3d
d4o2ad1
D:1-245
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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)
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Protein & NOT PROSITE
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Chain C
Chain D
Chain E
Chain F
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