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4NT3
Asym. Unit
Info
Asym.Unit (214 KB)
Biol.Unit 1 (208 KB)
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(1)
Title
:
STRUCTURE OF THE COMPLEX OF BOVINE LACTOPEROXIDASE WITH 3,3'-DIPYRIDYL KETONE AT 1.99 A RESOLUTION
Authors
:
H. V. Sirohi, G. S. Kushwaha, M. Sinha, P. Kaur, S. Sharma, T. P. Singh
Date
:
30 Nov 13 (Deposition) - 25 Dec 13 (Release) - 25 Dec 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Peroxidase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. V. Sirohi, G. S. Kushwaha, M. Sinha, P. Kaur, S. Sharma, T. P. Singh
Structure Of The Complex Of Bovine Lactoperoxidase With 3, 3'-Dipyridyl Ketone At 1. 99 A Resolution
To Be Published
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Hetero Components
(6, 19)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3a: IODIDE ION (IODa)
3b: IODIDE ION (IODb)
3c: IODIDE ION (IODc)
3d: IODIDE ION (IODd)
3e: IODIDE ION (IODe)
3f: IODIDE ION (IODf)
3g: IODIDE ION (IODg)
3h: IODIDE ION (IODh)
3i: IODIDE ION (IODi)
3j: IODIDE ION (IODj)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5a: PHOSPHOSERINE (SEPa)
6a: DI(PYRIDIN-3-YL)METHANONE (ZAWa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
IOD
10
Ligand/Ion
IODIDE ION
4
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
6
ZAW
1
Ligand/Ion
DI(PYRIDIN-3-YL)METHANONE
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
MET A:101 , GLY A:104 , GLN A:105 , ASP A:108 , ASP A:112 , PHE A:113 , ALA A:114 , ARG A:255 , GLU A:258 , GLN A:259 , THR A:344 , PHE A:347 , ARG A:348 , GLY A:350 , HIS A:351 , PHE A:380 , LEU A:417 , GLN A:423 , LEU A:433 , ILE A:436 , ARG A:440 , ZAW A:618 , HOH A:794 , HOH A:887
BINDING SITE FOR RESIDUE HEM A 601
02
AC2
SOFTWARE
ASP A:110 , THR A:184 , PHE A:186 , ASP A:188 , SER A:190
BINDING SITE FOR RESIDUE CA A 602
03
AC3
SOFTWARE
PRO A:236 , THR A:425
BINDING SITE FOR RESIDUE IOD A 608
04
AC4
SOFTWARE
TRP A:46 , VAL A:342 , TRP A:452
BINDING SITE FOR RESIDUE IOD A 609
05
AC5
SOFTWARE
TRP A:530
BINDING SITE FOR RESIDUE IOD A 610
06
AC6
SOFTWARE
ASN A:80
BINDING SITE FOR RESIDUE IOD A 611
07
AC7
SOFTWARE
ARG A:202 , HOH A:820
BINDING SITE FOR RESIDUE IOD A 612
08
AC8
SOFTWARE
THR A:560 , LYS A:561
BINDING SITE FOR RESIDUE IOD A 613
09
AC9
SOFTWARE
LYS A:462
BINDING SITE FOR RESIDUE IOD A 614
10
BC1
SOFTWARE
HIS A:377
BINDING SITE FOR RESIDUE IOD A 615
11
BC2
SOFTWARE
HIS A:565 , ALA A:566 , PHE A:567
BINDING SITE FOR RESIDUE IOD A 617
12
BC3
SOFTWARE
HIS A:109 , PHE A:254 , ARG A:255 , GLU A:258 , GLN A:423 , HEM A:601 , HOH A:887
BINDING SITE FOR RESIDUE ZAW A 618
13
BC4
SOFTWARE
ASN A:95 , ARG A:96 , GLN A:568 , HOH A:731 , HOH A:891
BINDING SITE FOR MONO-SACCHARIDE NAG A 607 BOUND TO ASN A 95
14
BC5
SOFTWARE
ASN A:205 , SER A:208 , ALA A:214 , VAL A:215 , GLN A:217
BINDING SITE FOR MONO-SACCHARIDE NAG A 605 BOUND TO ASN A 205
15
BC6
SOFTWARE
ASN A:241 , ALA A:244 , TRP A:384
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 241 RESIDUES 603 TO 604
16
BC7
SOFTWARE
ASN A:332 , VAL A:335 , HOH A:872
BINDING SITE FOR MONO-SACCHARIDE NAG A 606 BOUND TO ASN A 332
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (214 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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