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4NMA
Asym. Unit
Info
Asym.Unit (639 KB)
Biol.Unit 1 (632 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PROLINE UTILIZATION A (PUTA) FROM GEOBACTER SULFURREDUCENS PCA IN COMPLEX WITH L-TETRAHYDRO-2-FUROIC ACID
Authors
:
H. Singh, J. J. Tanner
Date
:
14 Nov 13 (Deposition) - 19 Feb 14 (Release) - 19 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Flavoenzyme, Rossmann Fold, Aldehyde Dehydrogenase, Flavin Adenine Dinucleotide, Nicotinamide Adenine Dinucleotide, Proline Catabolism, Substrate Channeling, Bifunctional Enzyme, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Singh, B. W. Arentson, D. F. Becker, J. J. Tanner
Structures Of The Puta Peripheral Membrane Flavoenzyme Reveal A Dynamic Substrate-Channeling Tunnel And The Quinone-Binding Site.
Proc. Natl. Acad. Sci. Usa V. 111 3389 2014
[
close entry info
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Hetero Components
(3, 24)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
1s: 1,2-ETHANEDIOL (EDOs)
1t: 1,2-ETHANEDIOL (EDOt)
2a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
2b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
3a: TETRAHYDROFURAN-2-CARBOXYLIC ACID (TFBa)
3b: TETRAHYDROFURAN-2-CARBOXYLIC ACID (TFBb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
20
Ligand/Ion
1,2-ETHANEDIOL
2
FAD
2
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
3
TFB
2
Ligand/Ion
TETRAHYDROFURAN-2-CARBOXYLIC ACID
[
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]
Sites
(24, 24)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:244 , MET A:245 , GLN A:276 , TYR A:278 , ARG A:303 , VAL A:305 , LYS A:306 , GLY A:307 , ALA A:308 , TYR A:309 , TRP A:310 , TRP A:327 , THR A:328 , ILE A:329 , LYS A:330 , SER A:333 , ALA A:356 , SER A:357 , HIS A:358 , ASN A:359 , GLN A:383 , VAL A:384 , ARG A:422 , GLU A:425 , SER A:431 , PHE A:432 , TFB A:2002 , HOH A:2358 , HOH A:2434
BINDING SITE FOR RESIDUE FAD A 2001
02
AC2
SOFTWARE
LYS A:203 , ASP A:244 , ALA A:308 , TYR A:406 , TYR A:418 , ARG A:421 , ARG A:422 , FAD A:2001 , HOH A:2359
BINDING SITE FOR RESIDUE TFB A 2002
03
AC3
SOFTWARE
TYR A:248 , TRP A:322 , ASP A:485 , THR A:487 , HOH A:2259 , HOH A:2375
BINDING SITE FOR RESIDUE EDO A 2003
04
AC4
SOFTWARE
GLU A:609 , PHE A:613 , ALA A:950 , LEU A:951 , VAL A:952 , GLN A:955 , ALA A:969
BINDING SITE FOR RESIDUE EDO A 2004
05
AC5
SOFTWARE
ASN A:911 , THR A:913 , PHE A:915 , ARG A:937 , ARG A:961 , HOH A:2400
BINDING SITE FOR RESIDUE EDO A 2005
06
AC6
SOFTWARE
PRO A:269 , GLN A:299 , ILE A:300 , HIS A:352 , ARG A:379
BINDING SITE FOR RESIDUE EDO A 2006
07
AC7
SOFTWARE
TRP A:327 , GLU A:332 , ALA A:336 , ARG A:339 , HOH A:2287
BINDING SITE FOR RESIDUE EDO A 2007
08
AC8
SOFTWARE
GLY A:148 , GLU A:149 , THR A:151 , GLU A:156 , HOH A:2324
BINDING SITE FOR RESIDUE EDO A 2008
09
AC9
SOFTWARE
ARG A:619 , GLU A:620 , GLU A:953 , HOH A:2317
BINDING SITE FOR RESIDUE EDO A 2009
10
BC1
SOFTWARE
HIS A:498 , LYS A:583 , ARG A:584 , LEU A:585 , PHE A:586 , GLU A:587
BINDING SITE FOR RESIDUE EDO A 2010
11
BC2
SOFTWARE
LYS A:678 , GLY A:709 , GLY A:711 , HOH A:2258 , HOH A:2389 , HOH A:2436
BINDING SITE FOR RESIDUE EDO A 2011
12
BC3
SOFTWARE
ASP A:57 , PRO A:60 , SER A:61 , ARG A:924 , HOH A:2172 , ARG B:991
BINDING SITE FOR RESIDUE EDO A 2012
13
BC4
SOFTWARE
ASP A:770 , LEU A:802 , ASP A:803 , ALA A:804 , HOH A:2246
BINDING SITE FOR RESIDUE EDO A 2013
14
BC5
SOFTWARE
ASP B:244 , MET B:245 , VAL B:274 , GLN B:276 , TYR B:278 , ARG B:303 , VAL B:305 , LYS B:306 , GLY B:307 , ALA B:308 , TYR B:309 , TRP B:310 , TRP B:327 , THR B:328 , ILE B:329 , LYS B:330 , SER B:333 , ALA B:356 , SER B:357 , HIS B:358 , ASN B:359 , LEU B:385 , ARG B:422 , GLU B:425 , SER B:431 , PHE B:432 , TFB B:2002 , HOH B:2106 , HOH B:2208
BINDING SITE FOR RESIDUE FAD B 2001
15
BC6
SOFTWARE
LYS B:203 , ASP B:244 , TYR B:406 , ARG B:421 , ARG B:422 , FAD B:2001 , HOH B:2149
BINDING SITE FOR RESIDUE TFB B 2002
16
BC7
SOFTWARE
ASP B:770 , ASP B:803 , ALA B:804 , LYS B:901 , HOH B:2122
BINDING SITE FOR RESIDUE EDO B 2003
17
BC8
SOFTWARE
GLU B:609 , PHE B:613 , ALA B:950 , LEU B:951 , GLN B:955 , PRO B:956 , PHE B:957 , ALA B:969
BINDING SITE FOR RESIDUE EDO B 2004
18
BC9
SOFTWARE
TYR B:248 , TRP B:322 , GLU B:323 , ASP B:485 , THR B:487 , HOH B:2374
BINDING SITE FOR RESIDUE EDO B 2005
19
CC1
SOFTWARE
GLN A:319 , ARG A:945 , GLU B:636 , ASN B:987
BINDING SITE FOR RESIDUE EDO B 2006
20
CC2
SOFTWARE
ALA B:910 , ASN B:911 , PHE B:915 , ARG B:937 , VAL B:938 , ARG B:961 , HOH B:2154
BINDING SITE FOR RESIDUE EDO B 2007
21
CC3
SOFTWARE
PRO B:269 , GLN B:299 , ILE B:300 , ILE B:350 , HIS B:352 , ARG B:379
BINDING SITE FOR RESIDUE EDO B 2008
22
CC4
SOFTWARE
TRP B:327 , GLU B:332 , ALA B:336 , ARG B:339 , ARG B:458
BINDING SITE FOR RESIDUE EDO B 2009
23
CC5
SOFTWARE
PHE B:513 , LEU B:699 , PRO B:700 , GLU B:701 , GLY B:702 , VAL B:703 , PHE B:704 , HOH B:2204
BINDING SITE FOR RESIDUE EDO B 2010
24
CC6
SOFTWARE
HIS B:498 , LYS B:583 , ARG B:584 , LEU B:585 , PHE B:586 , GLU B:587 , HOH B:2455
BINDING SITE FOR RESIDUE EDO B 2011
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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