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4N4K
Asym. Unit
Info
Asym.Unit (104 KB)
Biol.Unit 1 (275 KB)
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(1)
Title
:
KUENENIA STUTTGARTIENSIS HYDROXYLAMINE OXIDOREDUCTASE SOAKED IN HYDROXYLAMINE
Authors
:
W. J. Maalcke, A. Dietl, S. J. Marritt, J. N. Butt, M. S. M. Jetten, J. T. Ke T. R. M. B. Barends, B. Kartal
Date
:
08 Oct 13 (Deposition) - 11 Dec 13 (Release) - 05 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (3x)
Keywords
:
C-Type Cytochrome, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. J. Maalcke, A. Dietl, S. J. Marritt, J. N. Butt, M. S. Jetten, J. T. Keltjens, T. R. Barends, B. Kartal
Structural Basis Of Biological No Generation By Octaheme Oxidoreductases.
J. Biol. Chem. V. 289 1228 2014
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Hetero Components
(5, 15)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
2a: HEME C (HECa)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
3d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
3e: PROTOPORPHYRIN IX CONTAINING FE (HEMe)
3f: PROTOPORPHYRIN IX CONTAINING FE (HEMf)
3g: PROTOPORPHYRIN IX CONTAINING FE (HEMg)
4a: HYDROXYAMINE (HOAa)
5a: PHOSPHATE ION (PO4a)
5b: PHOSPHATE ION (PO4b)
5c: PHOSPHATE ION (PO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
2
HEC
1
Ligand/Ion
HEME C
3
HEM
7
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
HOA
1
Ligand/Ion
HYDROXYAMINE
5
PO4
3
Ligand/Ion
PHOSPHATE ION
[
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:79 , ARG A:519 , HOH A:857
BINDING SITE FOR RESIDUE PO4 A 601
02
AC2
SOFTWARE
ARG A:79 , GLY A:80 , LYS A:83 , LYS A:148 , TRP A:516 , HOH A:882
BINDING SITE FOR RESIDUE PO4 A 602
03
AC3
SOFTWARE
LYS A:472 , HOH A:1000
BINDING SITE FOR RESIDUE PO4 A 603
04
AC4
SOFTWARE
ILE A:127 , ASP A:130 , ARG A:240 , HIS A:241 , CYS A:349 , HEM A:608
BINDING SITE FOR RESIDUE EDO A 604
05
AC5
SOFTWARE
ASP A:329 , ASP A:363 , ASN A:367 , HOH A:767 , HOH A:902
BINDING SITE FOR RESIDUE EDO A 605
06
AC6
SOFTWARE
ILE A:261 , ASP A:264 , TYR A:432 , ASN A:436 , ASN A:453 , GLY A:454 , GLU A:458
BINDING SITE FOR RESIDUE EDO A 606
07
AC7
SOFTWARE
GLN A:47 , TRP A:94 , TRP A:101 , SER A:105 , GLN A:106 , THR A:107 , PHE A:111 , GLU A:115 , CYS A:116 , CYS A:119 , HIS A:120 , GLN A:123 , CYS A:160 , ALA A:161 , GLY A:165 , HIS A:168 , LEU A:171 , SER A:351 , PRO A:352 , ARG A:353 , HOH A:915 , HOH A:916
BINDING SITE FOR RESIDUE HEM A 607
08
AC8
SOFTWARE
TRP A:94 , HIS A:120 , ILE A:127 , TRP A:131 , HIS A:136 , VAL A:158 , GLY A:159 , CYS A:160 , CYS A:163 , HIS A:164 , MET A:173 , ARG A:233 , SER A:235 , ARG A:240 , HIS A:241 , HIS A:350 , SER A:351 , EDO A:604 , HEM A:609 , HOH A:850 , HOH A:852
BINDING SITE FOR RESIDUE HEM A 608
09
AC9
SOFTWARE
SER A:135 , HIS A:136 , ARG A:142 , ARG A:143 , GLY A:144 , ILE A:145 , ILE A:147 , VAL A:158 , CYS A:179 , CYS A:182 , HIS A:183 , CYS A:234 , PHE A:243 , PRO A:245 , HEM A:608 , HOH A:843 , HOH A:924 , HOH A:983 , HOH A:984 , HOH A:985
BINDING SITE FOR RESIDUE HEM A 609
10
BC1
SOFTWARE
ASN A:205 , PHE A:209 , HIS A:212 , GLY A:222 , CYS A:223 , CYS A:226 , HIS A:227 , VAL A:256 , CYS A:257 , HIS A:258 , HIS A:263 , TYR A:320 , ASP A:322 , MET A:323 , MET A:325 , LYS A:439 , THR A:450 , TYR A:451 , ARG A:525 , HEM A:612 , HEM A:613 , HOA A:615 , HOH A:782 , HOH A:784 , HOH A:785
BINDING SITE FOR RESIDUE HEC A 610
11
BC2
SOFTWARE
ARG A:143 , TYR A:176 , CYS A:179 , HIS A:183 , GLU A:186 , HIS A:198 , CYS A:234 , CYS A:237 , HIS A:238 , ALA A:248 , ARG A:249 , LYS A:290 , LEU A:291 , MET A:306 , GLY A:309 , HIS A:311 , LYS A:518 , HOH A:927 , HOH A:929 , HOH A:945
BINDING SITE FOR RESIDUE HEM A 611
12
BC3
SOFTWARE
GLY A:196 , SER A:197 , HIS A:198 , ALA A:201 , ASN A:205 , CYS A:226 , HIS A:227 , ILE A:229 , ALA A:230 , GLY A:236 , ALA A:253 , CYS A:254 , CYS A:257 , HIS A:258 , CYS A:301 , GLN A:314 , TYR A:320 , HEC A:610 , HOH A:781 , HOH A:784 , HOH A:867 , HOH A:971
BINDING SITE FOR RESIDUE HEM A 612
13
BC4
SOFTWARE
HIS A:258 , GLU A:265 , TYR A:269 , PRO A:299 , THR A:300 , CYS A:301 , CYS A:304 , HIS A:305 , GLY A:317 , THR A:318 , ARG A:330 , TRP A:342 , TYR A:438 , ALA A:442 , HIS A:443 , HEC A:610 , HOH A:778 , HOH A:779 , HOH A:780 , HOH A:782 , HOH A:865 , HOH A:867
BINDING SITE FOR RESIDUE HEM A 613
14
BC5
SOFTWARE
TYR A:95 , ARG A:233 , THR A:239 , ARG A:240 , ILE A:273 , HIS A:274 , LEU A:277 , TYR A:296 , ARG A:297 , PRO A:299 , TYR A:303 , CYS A:346 , CYS A:349 , HIS A:350 , PHE A:354 , LYS A:358 , MET A:444 , HOH A:813 , HOH A:814 , HOH A:990
BINDING SITE FOR RESIDUE HEM A 614
15
BC6
SOFTWARE
ASP A:262 , HIS A:263 , TYR A:451 , HEC A:610
BINDING SITE FOR RESIDUE HOA A 615
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Sorry, no Info available
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (104 KB)
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