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4N4D
Biol. Unit 2
Info
Asym.Unit (136 KB)
Biol.Unit 1 (66 KB)
Biol.Unit 2 (64 KB)
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(1)
Title
:
STRUCTURE OF THIT WITH AV-38 BOUND
Authors
:
L. J. Y. M. Swier, A. Guskov, D. J. Slotboom
Date
:
08 Oct 13 (Deposition) - 17 Sep 14 (Release) - 17 Sep 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
S-Component, Ecf Transporter, Abc Transporter, Transport Protein, Thiamine Binding Protein-Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. J. Y. M. Swier, L. Gomez, A. Guskov, A. K. H. Hirsch, D. J. Slotboom
Structural Studies On The Thiamine Binding Protein Thit
To Be Published
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Hetero Components
(8, 11)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
2a: B-NONYLGLUCOSIDE (BNGa)
2b: B-NONYLGLUCOSIDE (BNGb)
2c: B-NONYLGLUCOSIDE (BNGc)
2d: B-NONYLGLUCOSIDE (BNGd)
2e: B-NONYLGLUCOSIDE (BNGe)
3a: CHLORIDE ION (CLa)
4a: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20... (P33a)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
5b: DI(HYDROXYETHYL)ETHER (PEGb)
5c: DI(HYDROXYETHYL)ETHER (PEGc)
5d: DI(HYDROXYETHYL)ETHER (PEGd)
5e: DI(HYDROXYETHYL)ETHER (PEGe)
5f: DI(HYDROXYETHYL)ETHER (PEGf)
5g: DI(HYDROXYETHYL)ETHER (PEGg)
5h: DI(HYDROXYETHYL)ETHER (PEGh)
6a: 2-(2-METHOXYETHOXY)ETHANOL (PG0a)
6b: 2-(2-METHOXYETHOXY)ETHANOL (PG0b)
6c: 2-(2-METHOXYETHOXY)ETHANOL (PG0c)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
8a: TRIETHYLENE GLYCOL (PGEa)
8b: TRIETHYLENE GLYCOL (PGEb)
8c: TRIETHYLENE GLYCOL (PGEc)
8d: TRIETHYLENE GLYCOL (PGEd)
8e: TRIETHYLENE GLYCOL (PGEe)
8f: TRIETHYLENE GLYCOL (PGEf)
9a: {3-[(4-AMINO-2-METHYLPYRIMIDIN-5-Y... (XX8a)
9b: {3-[(4-AMINO-2-METHYLPYRIMIDIN-5-Y... (XX8b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
BNG
2
Ligand/Ion
B-NONYLGLUCOSIDE
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
P33
1
Ligand/Ion
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
5
PEG
2
Ligand/Ion
DI(HYDROXYETHYL)ETHER
6
PG0
1
Ligand/Ion
2-(2-METHOXYETHOXY)ETHANOL
7
PG4
1
Ligand/Ion
TETRAETHYLENE GLYCOL
8
PGE
2
Ligand/Ion
TRIETHYLENE GLYCOL
9
XX8
1
Ligand/Ion
{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]PHENYL}METHANOL
[
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Sites
(16, 16)
Info
All Sites
01: AC2 (SOFTWARE)
02: AC4 (SOFTWARE)
03: AC5 (SOFTWARE)
04: BC8 (SOFTWARE)
05: BC9 (SOFTWARE)
06: CC1 (SOFTWARE)
07: CC2 (SOFTWARE)
08: CC3 (SOFTWARE)
09: CC4 (SOFTWARE)
10: CC5 (SOFTWARE)
11: CC6 (SOFTWARE)
12: CC7 (SOFTWARE)
13: CC8 (SOFTWARE)
14: CC9 (SOFTWARE)
15: DC1 (SOFTWARE)
16: DC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC2
SOFTWARE
LEU A:97 , PHE A:98 , ARG A:99 , VAL A:116 , BNG B:202 , BNG B:203
BINDING SITE FOR RESIDUE BNG A 202
02
AC4
SOFTWARE
VAL A:31 , TYR A:32 , LEU B:112 , PG4 B:207
BINDING SITE FOR RESIDUE BNG A 204
03
AC5
SOFTWARE
LEU A:105 , LYS A:106 , LEU A:107 , ALA A:108 , LYS A:171 , TYR B:32
BINDING SITE FOR RESIDUE PG0 A 205
04
BC8
SOFTWARE
PHE A:115 , GLY A:152 , ILE A:156 , PGE A:215 , 1PE B:211
BINDING SITE FOR RESIDUE 1PE A 218
05
BC9
SOFTWARE
GLU B:84 , TYR B:122 , HIS B:125 , GLY B:129 , TRP B:133 , TYR B:146 , ASN B:151 , HOH B:301 , HOH B:303
BINDING SITE FOR RESIDUE XX8 B 201
06
CC1
SOFTWARE
BNG A:202 , LYS B:139 , GLY B:140 , TRP B:141 , BNG B:203 , PEG B:205
BINDING SITE FOR RESIDUE BNG B 202
07
CC2
SOFTWARE
LEU A:107 , ALA A:108 , LEU A:112 , BNG A:202 , VAL B:31 , TYR B:32 , ILE B:35 , TRP B:138 , TRP B:141 , BNG B:202
BINDING SITE FOR RESIDUE BNG B 203
08
CC3
SOFTWARE
SER B:91 , ILE B:94
BINDING SITE FOR RESIDUE PG0 B 204
09
CC4
SOFTWARE
PRO B:104 , GLY B:140 , GLY B:142 , ALA B:145 , BNG B:202
BINDING SITE FOR RESIDUE PEG B 205
10
CC5
SOFTWARE
ASN B:29 , THR B:30 , GLY B:33 , TRP B:34 , ILE B:36 , TYR B:74 , HOH B:311
BINDING SITE FOR RESIDUE PEG B 206
11
CC6
SOFTWARE
BNG A:204 , LEU B:97 , ARG B:99
BINDING SITE FOR RESIDUE PG4 B 207
12
CC7
SOFTWARE
ALA B:19 , ILE B:23 , PGE B:210
BINDING SITE FOR RESIDUE P33 B 208
13
CC8
SOFTWARE
MET B:68 , ILE B:69
BINDING SITE FOR RESIDUE PGE B 209
14
CC9
SOFTWARE
LEU B:10 , LEU B:11 , ILE B:14 , P33 B:208 , HOH B:324
BINDING SITE FOR RESIDUE PGE B 210
15
DC1
SOFTWARE
1PE A:218 , LEU B:119 , TYR B:122 , PHE B:123 , LEU B:148
BINDING SITE FOR RESIDUE 1PE B 211
16
DC2
SOFTWARE
GLY B:33 , TRP B:34 , TRP B:138
BINDING SITE FOR RESIDUE CL B 212
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (136 KB)
Header - Asym.Unit
Biol.Unit 1 (66 KB)
Header - Biol.Unit 1
Biol.Unit 2 (64 KB)
Header - Biol.Unit 2
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