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4MYO
Biol. Unit 2
Info
Asym.Unit (225 KB)
Biol.Unit 1 (219 KB)
Biol.Unit 2 (435 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STREPTOGRAMIN GROUP A ANTIBIOTIC ACETYLTRANSFERASE VATA FROM STAPHYLOCOCCUS AUREUS
Authors
:
P. J. Stogios, G. Minasov, A. Dong, E. Evdokimova, V. Yim, M. Krishnamoo Leo, P. Courvalin, A. Savchenko, W. F. Anderson, Center For Structu Genomics Of Infectious Diseases (Csgid)
Date
:
27 Sep 13 (Deposition) - 16 Oct 13 (Release) - 24 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: A,B,C (2x)
Keywords
:
Structural Genomics, Antibiotic Resistance, Center For Structural Genomics Of Infectious Diseases, Csgid, Niaid, National Institute Of Allergy And Infectious Diseases, Left-Handed Beta Helix Domain, Xenobiotic Acyltransferase (Xat) Family, Hexapeptide Repeat Acyltransferase, Transferase, Streptogramin Group A Antibiotics, Streptogramin A, Virginiamycin, Dalfopristin, Acetyl Coenzyme A, Coenzyme A, Intracellular
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
P. J. Stogios, M. L. Kuhn, E. Evdokimova, P. Courvalin, W. F. Anderson, A. Savchenko
Potential For Reduction Of Streptogramin A Resistance Revealed By Structural Analysis Of Acetyltransferase Vata.
Antimicrob. Agents Chemother. V. 58 7083 2014
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
2a: MAGNESIUM ION (MGa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
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Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
MG
-1
Ligand/Ion
MAGNESIUM ION
3
SO4
6
Ligand/Ion
SULFATE ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:164 , HOH A:432 , ASN B:164 , HOH B:429 , HOH B:430 , ASN C:164
BINDING SITE FOR RESIDUE MG A 301
02
AC2
SOFTWARE
LYS A:153 , PHE A:168
BINDING SITE FOR RESIDUE CL A 302
03
AC3
SOFTWARE
ASN A:203
BINDING SITE FOR RESIDUE CL A 303
04
AC4
SOFTWARE
GLU A:60
BINDING SITE FOR RESIDUE CL A 304
05
AC5
SOFTWARE
ASP A:118 , LYS A:138
BINDING SITE FOR RESIDUE CL A 305
06
AC6
SOFTWARE
PHE B:168
BINDING SITE FOR RESIDUE CL B 302
07
AC7
SOFTWARE
ARG B:88
BINDING SITE FOR RESIDUE CL B 304
08
AC8
SOFTWARE
LYS B:27 , GLY B:38 , GLU B:39 , ARG B:70
BINDING SITE FOR RESIDUE SO4 B 305
09
AC9
SOFTWARE
ARG C:100
BINDING SITE FOR RESIDUE CL C 301
10
BC1
SOFTWARE
LYS C:27 , GLY C:38 , GLU C:39 , ARG C:70
BINDING SITE FOR RESIDUE SO4 C 304
11
BC2
SOFTWARE
LYS C:153 , PHE C:168
BINDING SITE FOR RESIDUE SO4 C 305
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d4myoa_ (A:)
1b: SCOP_d4myob_ (B:)
1c: SCOP_d4myoc_ (C:)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Single-stranded left-handed beta-helix
(154)
Superfamily
:
Trimeric LpxA-like enzymes
(147)
Family
:
Galactoside acetyltransferase-like
(21)
Protein domain
:
automated matches
(6)
Staphylococcus aureus [TaxId: 1280]
(3)
1a
d4myoa_
A:
1b
d4myob_
B:
1c
d4myoc_
C:
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CATH Domains
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Pfam Domains
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Show PDB file:
Asym.Unit (225 KB)
Header - Asym.Unit
Biol.Unit 1 (219 KB)
Header - Biol.Unit 1
Biol.Unit 2 (435 KB)
Header - Biol.Unit 2
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