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4MUU
Biol. Unit 2
Info
Asym.Unit (140 KB)
Biol.Unit 1 (66 KB)
Biol.Unit 2 (67 KB)
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(1)
Title
:
STRUCTURE OF THIT WITH PYRITHIAMINE BOUND
Authors
:
L. J. Y. M. Swier, A. Guskov, D. J. Slotboom
Date
:
23 Sep 13 (Deposition) - 17 Sep 14 (Release) - 17 Sep 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
S-Component, Ecf Transporter, Abc Transporter, Thiamine Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. J. Y. M. Swier, L. Gomez, A. Guskov, A. K. H. Hirsch, D. J. Slotboom
Structural Studies On The Thiamin Binding Protein Thit
To Be Published
[
close entry info
]
Hetero Components
(8, 19)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL... (218a)
2b: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL... (218b)
3a: B-NONYLGLUCOSIDE (BNGa)
3b: B-NONYLGLUCOSIDE (BNGb)
3c: B-NONYLGLUCOSIDE (BNGc)
4a: HEXAETHYLENE GLYCOL (P6Ga)
4b: HEXAETHYLENE GLYCOL (P6Gb)
4c: HEXAETHYLENE GLYCOL (P6Gc)
4d: HEXAETHYLENE GLYCOL (P6Gd)
5a: 3,6,9,12,15,18,21,24-OCTAOXAHEXACO... (PE5a)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
6b: DI(HYDROXYETHYL)ETHER (PEGb)
6c: DI(HYDROXYETHYL)ETHER (PEGc)
6d: DI(HYDROXYETHYL)ETHER (PEGd)
6e: DI(HYDROXYETHYL)ETHER (PEGe)
6f: DI(HYDROXYETHYL)ETHER (PEGf)
6g: DI(HYDROXYETHYL)ETHER (PEGg)
6h: DI(HYDROXYETHYL)ETHER (PEGh)
6i: DI(HYDROXYETHYL)ETHER (PEGi)
6j: DI(HYDROXYETHYL)ETHER (PEGj)
7a: 2-(2-METHOXYETHOXY)ETHANOL (PG0a)
7b: 2-(2-METHOXYETHOXY)ETHANOL (PG0b)
7c: 2-(2-METHOXYETHOXY)ETHANOL (PG0c)
7d: 2-(2-METHOXYETHOXY)ETHANOL (PG0d)
7e: 2-(2-METHOXYETHOXY)ETHANOL (PG0e)
7f: 2-(2-METHOXYETHOXY)ETHANOL (PG0f)
7g: 2-(2-METHOXYETHOXY)ETHANOL (PG0g)
7h: 2-(2-METHOXYETHOXY)ETHANOL (PG0h)
8a: TETRAETHYLENE GLYCOL (PG4a)
8b: TETRAETHYLENE GLYCOL (PG4b)
8c: TETRAETHYLENE GLYCOL (PG4c)
8d: TETRAETHYLENE GLYCOL (PG4d)
8e: TETRAETHYLENE GLYCOL (PG4e)
8f: TETRAETHYLENE GLYCOL (PG4f)
8g: TETRAETHYLENE GLYCOL (PG4g)
8h: TETRAETHYLENE GLYCOL (PG4h)
8i: TETRAETHYLENE GLYCOL (PG4i)
9a: TRIETHYLENE GLYCOL (PGEa)
9b: TRIETHYLENE GLYCOL (PGEb)
9c: TRIETHYLENE GLYCOL (PGEc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
-1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
218
1
Ligand/Ion
1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-HYDROXYETHYL)-2-METHYLPYRIDINIUM
3
BNG
2
Ligand/Ion
B-NONYLGLUCOSIDE
4
P6G
4
Ligand/Ion
HEXAETHYLENE GLYCOL
5
PE5
1
Ligand/Ion
3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
6
PEG
3
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
PG0
2
Ligand/Ion
2-(2-METHOXYETHOXY)ETHANOL
8
PG4
4
Ligand/Ion
TETRAETHYLENE GLYCOL
9
PGE
2
Ligand/Ion
TRIETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(29, 29)
Info
All Sites
01: AC3 (SOFTWARE)
02: AC6 (SOFTWARE)
03: AC7 (SOFTWARE)
04: AC8 (SOFTWARE)
05: AC9 (SOFTWARE)
06: BC3 (SOFTWARE)
07: BC4 (SOFTWARE)
08: BC6 (SOFTWARE)
09: BC7 (SOFTWARE)
10: CC2 (SOFTWARE)
11: CC5 (SOFTWARE)
12: CC6 (SOFTWARE)
13: CC7 (SOFTWARE)
14: CC8 (SOFTWARE)
15: CC9 (SOFTWARE)
16: DC1 (SOFTWARE)
17: DC2 (SOFTWARE)
18: DC3 (SOFTWARE)
19: DC4 (SOFTWARE)
20: DC5 (SOFTWARE)
21: DC6 (SOFTWARE)
22: DC7 (SOFTWARE)
23: DC8 (SOFTWARE)
24: DC9 (SOFTWARE)
25: EC1 (SOFTWARE)
26: EC2 (SOFTWARE)
27: EC3 (SOFTWARE)
28: EC4 (SOFTWARE)
29: EC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC3
SOFTWARE
PHE A:108 , ALA A:118 , LEU A:122 , PG4 A:220 , TRP B:148
BINDING SITE FOR RESIDUE PEG A 203
02
AC6
SOFTWARE
TRP A:148 , ILE A:163 , PEG A:207 , PEG B:204
BINDING SITE FOR RESIDUE PEG A 206
03
AC7
SOFTWARE
ILE A:163 , PEG A:206 , PG4 A:216 , LEU B:122 , PEG B:204
BINDING SITE FOR RESIDUE PEG A 207
04
AC8
SOFTWARE
VAL A:174 , ILE A:177 , ILE B:170
BINDING SITE FOR RESIDUE PEG A 208
05
AC9
SOFTWARE
LYS A:181 , LEU B:167 , ILE B:170
BINDING SITE FOR RESIDUE PEG A 209
06
BC3
SOFTWARE
LEU A:129 , LEU A:130 , P6G B:210
BINDING SITE FOR RESIDUE PG0 A 212
07
BC4
SOFTWARE
LEU A:129 , BNG B:203
BINDING SITE FOR RESIDUE PG0 A 213
08
BC6
SOFTWARE
ILE A:170 , PHE B:173 , ILE B:177
BINDING SITE FOR RESIDUE PG0 A 215
09
BC7
SOFTWARE
VAL A:41 , PEG A:207 , LEU B:122 , PGE B:219
BINDING SITE FOR RESIDUE PG4 A 216
10
CC2
SOFTWARE
LEU A:107 , PHE A:108 , ARG A:109 , GLN A:110 , PEG A:203 , HOH A:309 , P6G B:210
BINDING SITE FOR RESIDUE PG4 A 220
11
CC5
SOFTWARE
TRP B:44 , ILE B:46 , GLU B:48 , GLU B:94 , TYR B:95 , HIS B:135 , GLY B:139 , TRP B:143 , TYR B:156 , ASN B:161 , P6G B:208 , HOH B:312
BINDING SITE FOR RESIDUE 218 B 201
12
CC6
SOFTWARE
ILE B:104 , LEU B:107 , PHE B:108 , ARG B:109 , PRO B:119 , VAL B:126 , PGE B:219 , HOH B:331
BINDING SITE FOR RESIDUE BNG B 202
13
CC7
SOFTWARE
LEU A:158 , GLY A:162 , ILE A:166 , PG0 A:213 , LEU B:129 , PHE B:133
BINDING SITE FOR RESIDUE BNG B 203
14
CC8
SOFTWARE
PEG A:206 , PEG A:207 , VAL B:126
BINDING SITE FOR RESIDUE PEG B 204
15
CC9
SOFTWARE
TYR B:42 , GLY B:43 , TYR B:146 , TRP B:148 , TYR B:156 , P6G B:208 , HOH B:342
BINDING SITE FOR RESIDUE PEG B 205
16
DC1
SOFTWARE
ALA B:113 , PRO B:114 , LEU B:115 , ALA B:147 , TRP B:148 , GLY B:150 , TRP B:151 , HOH B:311
BINDING SITE FOR RESIDUE PEG B 206
17
DC2
SOFTWARE
MET B:27 , LEU B:30 , ILE B:34 , ILE B:52 , LEU B:56 , PHE B:179 , PG4 B:213
BINDING SITE FOR RESIDUE P6G B 207
18
DC3
SOFTWARE
ASN B:39 , THR B:40 , GLY B:43 , TRP B:44 , ILE B:46 , TRP B:143 , TYR B:146 , 218 B:201 , PEG B:205 , P6G B:209 , HOH B:312
BINDING SITE FOR RESIDUE P6G B 208
19
DC4
SOFTWARE
THR B:40 , GLY B:81 , ALA B:83 , TYR B:84 , P6G B:208 , HOH B:318 , HOH B:320
BINDING SITE FOR RESIDUE P6G B 209
20
DC5
SOFTWARE
PG0 A:212 , PG4 A:220 , GLY B:150 , TRP B:151 , VAL B:154 , ALA B:155
BINDING SITE FOR RESIDUE P6G B 210
21
DC6
SOFTWARE
LEU B:88 , ALA B:91 , PGE B:218
BINDING SITE FOR RESIDUE PG0 B 211
22
DC7
SOFTWARE
PHE B:16 , ARG B:19 , GLU B:23 , HIS B:189 , SER B:190 , ASN B:191 , HOH B:316
BINDING SITE FOR RESIDUE PG0 B 212
23
DC8
SOFTWARE
THR B:40 , VAL B:47 , P6G B:207
BINDING SITE FOR RESIDUE PG4 B 213
24
DC9
SOFTWARE
LEU B:20 , ARG B:61 , VAL B:68 , ARG B:109 , PE5 B:217 , HOH B:327
BINDING SITE FOR RESIDUE PG4 B 214
25
EC1
SOFTWARE
LYS B:116 , LEU B:117 , ALA B:118 , LYS B:149 , VAL B:180
BINDING SITE FOR RESIDUE PG4 B 215
26
EC2
SOFTWARE
LEU A:115 , LYS A:116 , HOH A:308 , THR B:40 , VAL B:41 , TYR B:42 , GLY B:43 , HOH B:343
BINDING SITE FOR RESIDUE PG4 B 216
27
EC3
SOFTWARE
ALA B:25 , ALA B:29 , LEU B:76 , PG4 B:214 , HOH B:352
BINDING SITE FOR RESIDUE PE5 B 217
28
EC4
SOFTWARE
PG0 B:211
BINDING SITE FOR RESIDUE PGE B 218
29
EC5
SOFTWARE
PG4 A:216 , PHE B:108 , PRO B:119 , LEU B:122 , BNG B:202
BINDING SITE FOR RESIDUE PGE B 219
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
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[
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
Info
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CATH Domains
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Pfam Domains
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Info
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Chain B
Asymmetric Unit 1
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