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4MQK
Biol. Unit 2
Info
Asym.Unit (403 KB)
Biol.Unit 1 (197 KB)
Biol.Unit 2 (200 KB)
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(1)
Title
:
CARBONMONOXY STRUCTURE OF THE HUMAN FETAL HEMOGLOBIN MUTANT HBF TOMS RIVER ALPHAWTGAMMAV67M
Authors
:
J. Soman, J. S. Olson
Date
:
16 Sep 13 (Deposition) - 30 Oct 13 (Release) - 08 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.24
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,E,F (1x)
Biol. Unit 2: C,D,G,H (1x)
Keywords
:
Oxygen-Transport, Autooxidation, Oxygen Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Soman, J. S. Olson
Carbonmonoxy Structure Of The Human Fetal Hemoglobin Mutant Hbf Toms River Alphawtgammav67M
To Be Published
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Hetero Components
(2, 7)
Info
All Hetero Components
1a: CARBON MONOXIDE (CMOa)
1b: CARBON MONOXIDE (CMOb)
1c: CARBON MONOXIDE (CMOc)
1d: CARBON MONOXIDE (CMOd)
1e: CARBON MONOXIDE (CMOe)
1f: CARBON MONOXIDE (CMOf)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
2c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
2d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
2e: PROTOPORPHYRIN IX CONTAINING FE (HEMe)
2f: PROTOPORPHYRIN IX CONTAINING FE (HEMf)
2g: PROTOPORPHYRIN IX CONTAINING FE (HEMg)
2h: PROTOPORPHYRIN IX CONTAINING FE (HEMh)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CMO
3
Ligand/Ion
CARBON MONOXIDE
2
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC6 (SOFTWARE)
5: AC7 (SOFTWARE)
6: AC8 (SOFTWARE)
7: BC3 (SOFTWARE)
8: BC4 (SOFTWARE)
9: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:42 , PHE A:43 , HIS A:58 , LYS A:61 , LEU A:86 , HIS A:87 , LEU A:91 , VAL A:93 , ASN A:97 , PHE A:98 , LEU A:101 , LEU A:136 , CMO A:202 , HOH A:310 , HOH A:312 , HOH A:318 , SER G:3 , ALA G:5 , SER H:50 , SER H:52
BINDING SITE FOR RESIDUE HEM A 201
2
AC3
SOFTWARE
PHE B:41 , PHE B:42 , HIS B:63 , LYS B:66 , MET B:67 , SER B:70 , LEU B:91 , HIS B:92 , LEU B:96 , ASN B:102 , LEU B:106 , VAL B:137 , LEU B:141 , CMO B:202 , LYS D:65
BINDING SITE FOR RESIDUE HEM B 201
3
AC5
SOFTWARE
TYR C:42 , PHE C:43 , PHE C:46 , HIS C:58 , LYS C:61 , LEU C:83 , LEU C:86 , HIS C:87 , LEU C:91 , ASN C:97 , PHE C:98 , LEU C:101 , LEU C:136 , CMO C:202 , HOH C:315 , HOH C:329 , HOH C:343 , SER E:3 , ALA E:5 , SER F:50 , SER F:52 , HOH F:306
BINDING SITE FOR RESIDUE HEM C 201
4
AC6
SOFTWARE
LEU C:29 , HIS C:58 , VAL C:62 , HEM C:201
BINDING SITE FOR RESIDUE CMO C 202
5
AC7
SOFTWARE
PHE D:41 , PHE D:42 , HIS D:63 , LYS D:66 , MET D:67 , LEU D:91 , HIS D:92 , LEU D:96 , ASN D:102 , PHE D:103 , LEU D:106 , VAL D:137 , LEU D:141 , CMO D:202
BINDING SITE FOR RESIDUE HEM D 201
6
AC8
SOFTWARE
HIS D:63 , MET D:67 , HEM D:201
BINDING SITE FOR RESIDUE CMO D 202
7
BC3
SOFTWARE
TYR G:42 , PHE G:43 , PHE G:46 , HIS G:58 , LYS G:61 , LEU G:83 , LEU G:86 , HIS G:87 , ASN G:97 , PHE G:98 , LEU G:101 , LEU G:136 , HOH G:329 , HOH G:330 , HIS H:77
BINDING SITE FOR RESIDUE HEM G 201
8
BC4
SOFTWARE
ASN G:78 , PHE H:41 , PHE H:42 , HIS H:63 , LYS H:66 , MET H:67 , SER H:70 , LEU H:88 , LEU H:91 , HIS H:92 , LYS H:95 , LEU H:96 , ASN H:102 , LEU H:106 , LEU H:141 , CMO H:202
BINDING SITE FOR RESIDUE HEM H 201
9
BC5
SOFTWARE
HIS H:63 , MET H:67 , HEM H:201
BINDING SITE FOR RESIDUE CMO H 202
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d4mqkb_ (B:)
1b: SCOP_d4mqkd_ (D:)
1c: SCOP_d4mqkf_ (F:)
1d: SCOP_d4mqkh_ (H:)
2a: SCOP_d4mqka_ (A:)
2b: SCOP_d4mqkc_ (C:)
2c: SCOP_d4mqke_ (E:)
2d: SCOP_d4mqkg_ (G:)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
Globins
(1157)
Protein domain
:
automated matches
(99)
Human (Homo sapiens) [TaxId: 9606]
(5)
1a
d4mqkb_
B:
1b
d4mqkd_
D:
1c
d4mqkf_
F:
1d
d4mqkh_
H:
Protein domain
:
Hemoglobin, alpha-chain
(292)
Human (Homo sapiens) [TaxId: 9606]
(217)
2a
d4mqka_
A:
2b
d4mqkc_
C:
2c
d4mqke_
E:
2d
d4mqkg_
G:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (403 KB)
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Biol.Unit 1 (197 KB)
Header - Biol.Unit 1
Biol.Unit 2 (200 KB)
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