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4MPK
Asym. Unit
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Asym.Unit (67 KB)
Biol.Unit 1 (63 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE COMPLEX OF BUFFALO SIGNALING PROTEIN SPB-40 WITH N-ACETYLGLUCOSAMINE AT 2.65 A RESOLUTION
Authors
:
S. Yamini, A. Chaudhary, M. Sinha, P. Kaur, S. Sharma, T. P. Singh
Date
:
13 Sep 13 (Deposition) - 06 Nov 13 (Release) - 06 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.65
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Text Spb-40, Tim Barrel, Signaling Protein, N-Acetylglucosamine
(Keyword Search:
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Reference
:
S. Yamini, A. Chaudhary, M. Sinha, P. Kaur, S. Sharma, T. P. Singh
Crystal Structure Of The Complex Of Buffalo Signaling Protein Spb-40 With N-Acetylglucosamine At 2. 65 A Resolutio
To Be Published
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
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No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(3, 3)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:39 , ILE A:40 , SER A:41 , TRP A:48 , ARG A:84 , HOH A:512 , HOH A:573 , HOH A:582 , HOH A:590 , HOH A:591
BINDING SITE FOR RESIDUE NAG A 401
2
AC2
SOFTWARE
TRP A:10 , ARG A:14 , TRP A:78 , THR A:267 , TRP A:331 , LEU A:335
BINDING SITE FOR RESIDUE NAG A 402
3
AC3
SOFTWARE
PHE A:21 , ASN A:51 , HOH A:594 , HOH A:617
BINDING SITE FOR RESIDUE GOL A 403
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d4mpka2 (A:241-308)
2a: SCOP_d4mpka1 (A:1-240,A:309-362)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FKBP-like
(309)
Superfamily
:
Chitinase insertion domain
(107)
Family
:
Chitinase insertion domain
(107)
Protein domain
:
Signal processing protein (SPC-40, MGP-40)
(37)
Buffalo (Bubalus bubalis) [TaxId: 89462]
(6)
1a
d4mpka2
A:241-308
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
(Trans)glycosidases
(1191)
Family
:
Type II chitinase
(131)
Protein domain
:
Signal processing protein (SPC-40, MGP-40)
(37)
Buffalo (Bubalus bubalis) [TaxId: 89462]
(6)
2a
d4mpka1
A:1-240,A:309-362
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CATH Domains
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Chain A
Asymmetric Unit 1
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