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4MMU
Asym. Unit
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Asym.Unit (164 KB)
Biol.Unit 1 (458 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PREFUSION-STABILIZED RSV F VARIANT DS-CAV1 AT PH 5.5
Authors
:
M. G. Joyce, J. S. Mclellan, G. B. E. Stewart-Jones, M. Sastry, Y. Yang, B. S. Graham, P. D. Kwong
Date
:
09 Sep 13 (Deposition) - 20 Nov 13 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (3x)
Keywords
:
Fusion, Membrane, Viral Protein, Structure-Based Vaccine Design
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. S. Mclellan, M. Chen, M. G. Joyce, M. Sastry, G. B. Stewart-Jones, Y. Yang, B. Zhang, L. Chen, S. Srivatsan, A. Zheng, T. Zhou, K. W. Graepel, A. Kumar, S. Moin, J. C. Boyington, G. Y. Chuang, C. Soto, U. Baxa, A. Q. Bakker, H. Spits, T. Beaumont, Z. Zheng, N. Xia, S. Y. Ko, J. P. Todd, S. Rao, B. S. Graham, P. D. Kwong
Structure-Based Design Of A Fusion Glycoprotein Vaccine For Respiratory Syncytial Virus.
Science V. 342 592 2013
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2a: PHOSPHATE ION (PO4a)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
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No.
Name
Count
Type
Full Name
1
NAG
1
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
2
PO4
1
Ligand/Ion
PHOSPHATE ION
3
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:106 , PHE B:137 , ARG B:339 , GLN B:354 , GLU B:356
BINDING SITE FOR RESIDUE SO4 B 601
2
AC2
SOFTWARE
ASN B:500
BINDING SITE FOR RESIDUE NAG B 602
3
AC3
SOFTWARE
SER B:443 , LYS B:445 , GLY B:464 , SER B:466
BINDING SITE FOR RESIDUE SO4 B 603
4
AC4
SOFTWARE
LEU B:193 , ASP B:194 , LYS B:226
BINDING SITE FOR RESIDUE SO4 B 604
5
AC5
SOFTWARE
LYS B:293 , GLU B:294 , GLU B:295
BINDING SITE FOR RESIDUE SO4 B 605
6
AC6
SOFTWARE
LYS A:42 , GLY A:43 , PRO B:312 , CYS B:313 , TRP B:314
BINDING SITE FOR RESIDUE PO4 B 606
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SAPs(SNPs)/Variants
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select residue range 5 to 10 in all chains
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