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4MLA
Asym. Unit
Info
Asym.Unit (171 KB)
Biol.Unit 1 (87 KB)
Biol.Unit 2 (83 KB)
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(1)
Title
:
STRUCTURE OF MAIZE CYTOKININ OXIDASE/DEHYDROGENASE 2 (ZMCKO2)
Authors
:
S. Morera, D. Kopecny, P. Briozzo, R. Koncitikova
Date
:
06 Sep 13 (Deposition) - 11 Mar 15 (Release) - 23 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.04
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Oxidoreductase, Fad Binding Protein, Flavoprotein, Cytokinin Oxidase/Dehydrogenase, Cytokinin Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Kopecny, R. Koncitikova, H. Popelka, P. Briozzo, A. Vigouroux, M. Kopecna, D. Zalabak, M. Sebela, J. Skopalova, I. Frebort, S. Morera
Kinetic And Structural Investigation Of The Cytokinin Oxidase/Dehydrogenase Active Site.
Febs J. V. 283 361 2016
[
close entry info
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Hetero Components
(4, 40)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
2a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
2b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
4a: ISOPROPYL ALCOHOL (IPAa)
4aa: ISOPROPYL ALCOHOL (IPAaa)
4ab: ISOPROPYL ALCOHOL (IPAab)
4ac: ISOPROPYL ALCOHOL (IPAac)
4b: ISOPROPYL ALCOHOL (IPAb)
4c: ISOPROPYL ALCOHOL (IPAc)
4d: ISOPROPYL ALCOHOL (IPAd)
4e: ISOPROPYL ALCOHOL (IPAe)
4f: ISOPROPYL ALCOHOL (IPAf)
4g: ISOPROPYL ALCOHOL (IPAg)
4h: ISOPROPYL ALCOHOL (IPAh)
4i: ISOPROPYL ALCOHOL (IPAi)
4j: ISOPROPYL ALCOHOL (IPAj)
4k: ISOPROPYL ALCOHOL (IPAk)
4l: ISOPROPYL ALCOHOL (IPAl)
4m: ISOPROPYL ALCOHOL (IPAm)
4n: ISOPROPYL ALCOHOL (IPAn)
4o: ISOPROPYL ALCOHOL (IPAo)
4p: ISOPROPYL ALCOHOL (IPAp)
4q: ISOPROPYL ALCOHOL (IPAq)
4r: ISOPROPYL ALCOHOL (IPAr)
4s: ISOPROPYL ALCOHOL (IPAs)
4t: ISOPROPYL ALCOHOL (IPAt)
4u: ISOPROPYL ALCOHOL (IPAu)
4v: ISOPROPYL ALCOHOL (IPAv)
4w: ISOPROPYL ALCOHOL (IPAw)
4x: ISOPROPYL ALCOHOL (IPAx)
4y: ISOPROPYL ALCOHOL (IPAy)
4z: ISOPROPYL ALCOHOL (IPAz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
2
FAD
2
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
3
GOL
3
Ligand/Ion
GLYCEROL
4
IPA
29
Ligand/Ion
ISOPROPYL ALCOHOL
[
close Hetero Component info
]
Sites
(40, 40)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:55 , ALA A:95 , GLY A:97 , HIS A:98 , GLY A:99 , HIS A:100 , SER A:101 , GLN A:105 , SER A:106 , THR A:157 , ASP A:158 , TYR A:159 , THR A:163 , GLY A:165 , GLY A:166 , THR A:167 , SER A:169 , ASN A:170 , GLY A:172 , VAL A:173 , GLY A:219 , GLY A:222 , ILE A:223 , ILE A:224 , TRP A:373 , TYR A:469 , GLN A:507 , EDO A:608 , IPA A:610 , HOH A:702 , HOH A:712 , HOH A:727
BINDING SITE FOR RESIDUE FAD A 601
02
AC2
SOFTWARE
ASP A:414 , ASN A:415 , THR A:417 , VAL A:419 , HOH A:812
BINDING SITE FOR RESIDUE IPA A 602
03
AC3
SOFTWARE
ASP A:132 , GLN A:189 , LEU A:190 , GLU A:191 , ARG A:226
BINDING SITE FOR RESIDUE IPA A 603
04
AC4
SOFTWARE
PHE A:55 , ARG A:96 , HIS A:98 , GLY A:99 , GLU A:368
BINDING SITE FOR RESIDUE IPA A 604
05
AC5
SOFTWARE
TRP A:413 , ASP A:414 , ASN A:415
BINDING SITE FOR RESIDUE EDO A 605
06
AC6
SOFTWARE
LEU A:31 , SER A:32 , GLY A:35 , PHE A:45 , ALA B:363
BINDING SITE FOR RESIDUE IPA A 606
07
AC7
SOFTWARE
VAL A:187 , PRO A:204 , ASP A:414 , HOH A:755
BINDING SITE FOR RESIDUE EDO A 607
08
AC8
SOFTWARE
ASP A:158 , FAD A:601
BINDING SITE FOR RESIDUE EDO A 608
09
AC9
SOFTWARE
PRO A:372 , LEU A:374 , LEU A:395 , PHE A:432 , SER A:434 , ALA A:448 , ASN A:452
BINDING SITE FOR RESIDUE GOL A 609
10
BC1
SOFTWARE
TRP A:373 , ASN A:375 , LEU A:404 , FAD A:601
BINDING SITE FOR RESIDUE IPA A 610
11
BC2
SOFTWARE
PHE A:61 , GLY A:104 , GLN A:107 , ALA A:109 , PRO A:505 , GLY A:506 , ARG A:508
BINDING SITE FOR RESIDUE IPA A 611
12
BC3
SOFTWARE
PHE A:178 , ILE A:259 , ALA A:261 , LYS A:412
BINDING SITE FOR RESIDUE IPA A 612
13
BC4
SOFTWARE
GLN A:58 , SER A:60 , PHE A:61
BINDING SITE FOR RESIDUE IPA A 613
14
BC5
SOFTWARE
CYS A:459 , GLU A:460 , ASP A:463 , GLY A:465 , MET A:466
BINDING SITE FOR RESIDUE IPA A 614
15
BC6
SOFTWARE
GLY A:129 , LYS A:154 , ALA A:230 , LEU A:231
BINDING SITE FOR RESIDUE IPA A 615
16
BC7
SOFTWARE
ARG A:179 , HIS A:180 , SER A:185
BINDING SITE FOR RESIDUE IPA A 616
17
BC8
SOFTWARE
ALA A:363 , LEU B:31 , SER B:32 , PHE B:45
BINDING SITE FOR RESIDUE IPA A 617
18
BC9
SOFTWARE
TYR A:473 , GLN A:478
BINDING SITE FOR RESIDUE IPA A 618
19
CC1
SOFTWARE
GLU A:87 , SER A:89 , PRO A:90 , LYS A:512
BINDING SITE FOR RESIDUE IPA A 619
20
CC2
SOFTWARE
PRO A:370 , ALA A:436 , PRO A:437 , SER A:438 , LEU A:439 , LEU B:439
BINDING SITE FOR RESIDUE IPA A 620
21
CC3
SOFTWARE
LEU A:439 , PRO B:437
BINDING SITE FOR RESIDUE IPA A 621
22
CC4
SOFTWARE
HIS A:127 , ASP A:128 , GLY A:129 , LEU A:151
BINDING SITE FOR RESIDUE IPA A 622
23
CC5
SOFTWARE
LYS A:467 , THR A:481 , GLY A:484 , ALA A:485
BINDING SITE FOR RESIDUE EDO A 623
24
CC6
SOFTWARE
HIS A:46 , HOH A:797 , ARG B:362 , SER B:365 , HOH B:847
BINDING SITE FOR RESIDUE EDO A 624
25
CC7
SOFTWARE
PHE B:61 , GLY B:104 , GLN B:107 , PRO B:505 , GLY B:506 , ARG B:508
BINDING SITE FOR RESIDUE IPA B 601
26
CC8
SOFTWARE
PHE B:55 , ALA B:95 , GLY B:97 , HIS B:98 , GLY B:99 , HIS B:100 , SER B:101 , GLN B:105 , SER B:106 , THR B:157 , ASP B:158 , TYR B:159 , THR B:163 , GLY B:165 , GLY B:166 , THR B:167 , SER B:169 , ASN B:170 , GLY B:172 , VAL B:173 , GLY B:219 , GLY B:222 , ILE B:223 , ILE B:224 , TRP B:373 , TYR B:469 , GLN B:507 , EDO B:605 , IPA B:609 , HOH B:723 , HOH B:730 , HOH B:736
BINDING SITE FOR RESIDUE FAD B 602
27
CC9
SOFTWARE
ARG B:96 , HIS B:98 , GLY B:99 , HIS B:100 , TRP B:367 , GLU B:368 , HOH B:726
BINDING SITE FOR RESIDUE GOL B 603
28
DC1
SOFTWARE
ILE B:259 , ALA B:261
BINDING SITE FOR RESIDUE IPA B 604
29
DC2
SOFTWARE
FAD B:602
BINDING SITE FOR RESIDUE EDO B 605
30
DC3
SOFTWARE
TYR B:473 , GLN B:478
BINDING SITE FOR RESIDUE IPA B 606
31
DC4
SOFTWARE
CYS B:459 , GLU B:460 , GLY B:465 , MET B:466
BINDING SITE FOR RESIDUE IPA B 607
32
DC5
SOFTWARE
TRP B:240 , THR B:343
BINDING SITE FOR RESIDUE IPA B 608
33
DC6
SOFTWARE
ASP B:158 , TRP B:373 , ASN B:375 , LEU B:404 , FAD B:602
BINDING SITE FOR RESIDUE IPA B 609
34
DC7
SOFTWARE
CYS B:59 , SER B:60 , PHE B:61
BINDING SITE FOR RESIDUE IPA B 610
35
DC8
SOFTWARE
ASP B:132 , GLN B:189 , ARG B:226 , ARG B:228 , HOH B:813
BINDING SITE FOR RESIDUE IPA B 611
36
DC9
SOFTWARE
ASP B:414 , ASN B:415 , THR B:417 , VAL B:419
BINDING SITE FOR RESIDUE IPA B 612
37
EC1
SOFTWARE
PRO B:372 , PHE B:432 , SER B:434 , ALA B:448 , ASN B:452
BINDING SITE FOR RESIDUE IPA B 613
38
EC2
SOFTWARE
HIS B:127 , ASP B:128
BINDING SITE FOR RESIDUE IPA B 614
39
EC3
SOFTWARE
ASP B:128 , GLY B:129 , PHE B:130 , LYS B:154 , LEU B:231
BINDING SITE FOR RESIDUE GOL B 615
40
EC4
SOFTWARE
HIS B:180 , SER B:185
BINDING SITE FOR RESIDUE IPA B 616
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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