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4MHH
Biol. Unit 1
Info
Asym.Unit (478 KB)
Biol.Unit 1 (465 KB)
Biol.Unit 2 (262 KB)
Biol.Unit 3 (77 KB)
Biol.Unit 4 (77 KB)
Biol.Unit 5 (78 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF FAB H5M9 IN COMPLEX WITH INFLUENZA VIRUS HEMAGGLUTININ FROM A/VIET NAM/1203/2004 (H5N1)
Authors
:
X. Zhu, I. A. Wilson
Date
:
29 Aug 13 (Deposition) - 02 Oct 13 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.56
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L (1x)
Biol. Unit 2: A,B,C,D,E,F (1x)
Biol. Unit 3: H,L (1x)
Biol. Unit 4: G,I (1x)
Biol. Unit 5: J,K (1x)
Keywords
:
H5N1 Influenza Virus, Broadly Neutralizing Murine Antibody, Escape Mutant, Passive Immunotherapy, Viral Protein-Immune System Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Zhu, Y. H. Guo, T. Jiang, Y. D. Wang, K. H. Chan, X. F. Li, W. Yu, R. Mcbride, J. C. Paulson, K. Y. Yuen, C. F. Qin, X. Y. Che, I. A. Wilson
A Unique And Conserved Neutralization Epitope In H5N1 Influenza Viruses Identified By An Antibody Against The A/Goose/Guangdong/1/96 Hemagglutinin.
J. Virol. V. 87 12619 2013
[
close entry info
]
Hetero Components
(2, 52)
Info
All Hetero Components
1a: ALPHA-D-MANNOSE (MANa)
1b: ALPHA-D-MANNOSE (MANb)
1c: ALPHA-D-MANNOSE (MANc)
1d: ALPHA-D-MANNOSE (MANd)
1e: ALPHA-D-MANNOSE (MANe)
1f: ALPHA-D-MANNOSE (MANf)
1g: ALPHA-D-MANNOSE (MANg)
1h: ALPHA-D-MANNOSE (MANh)
1i: ALPHA-D-MANNOSE (MANi)
1j: ALPHA-D-MANNOSE (MANj)
1k: ALPHA-D-MANNOSE (MANk)
1l: ALPHA-D-MANNOSE (MANl)
1m: ALPHA-D-MANNOSE (MANm)
1n: ALPHA-D-MANNOSE (MANn)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2aa: N-ACETYL-D-GLUCOSAMINE (NAGaa)
2ab: N-ACETYL-D-GLUCOSAMINE (NAGab)
2ac: N-ACETYL-D-GLUCOSAMINE (NAGac)
2ad: N-ACETYL-D-GLUCOSAMINE (NAGad)
2ae: N-ACETYL-D-GLUCOSAMINE (NAGae)
2af: N-ACETYL-D-GLUCOSAMINE (NAGaf)
2ag: N-ACETYL-D-GLUCOSAMINE (NAGag)
2ah: N-ACETYL-D-GLUCOSAMINE (NAGah)
2ai: N-ACETYL-D-GLUCOSAMINE (NAGai)
2aj: N-ACETYL-D-GLUCOSAMINE (NAGaj)
2ak: N-ACETYL-D-GLUCOSAMINE (NAGak)
2al: N-ACETYL-D-GLUCOSAMINE (NAGal)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
2g: N-ACETYL-D-GLUCOSAMINE (NAGg)
2h: N-ACETYL-D-GLUCOSAMINE (NAGh)
2i: N-ACETYL-D-GLUCOSAMINE (NAGi)
2j: N-ACETYL-D-GLUCOSAMINE (NAGj)
2k: N-ACETYL-D-GLUCOSAMINE (NAGk)
2l: N-ACETYL-D-GLUCOSAMINE (NAGl)
2m: N-ACETYL-D-GLUCOSAMINE (NAGm)
2n: N-ACETYL-D-GLUCOSAMINE (NAGn)
2o: N-ACETYL-D-GLUCOSAMINE (NAGo)
2p: N-ACETYL-D-GLUCOSAMINE (NAGp)
2q: N-ACETYL-D-GLUCOSAMINE (NAGq)
2r: N-ACETYL-D-GLUCOSAMINE (NAGr)
2s: N-ACETYL-D-GLUCOSAMINE (NAGs)
2t: N-ACETYL-D-GLUCOSAMINE (NAGt)
2u: N-ACETYL-D-GLUCOSAMINE (NAGu)
2v: N-ACETYL-D-GLUCOSAMINE (NAGv)
2w: N-ACETYL-D-GLUCOSAMINE (NAGw)
2x: N-ACETYL-D-GLUCOSAMINE (NAGx)
2y: N-ACETYL-D-GLUCOSAMINE (NAGy)
2z: N-ACETYL-D-GLUCOSAMINE (NAGz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MAN
14
Ligand/Ion
ALPHA-D-MANNOSE
2
NAG
38
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:21 , GLN B:15
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 21 RESIDUES 2010 TO 2011
02
AC2
SOFTWARE
ASN A:33
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 33 RESIDUES 2012 TO 2014
03
AC3
SOFTWARE
ASN A:158
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 158 RESIDUES 2008 TO 2009
04
AC4
SOFTWARE
ASN A:169 , ASN A:240
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 169 RESIDUES 2001 TO 2005
05
AC5
SOFTWARE
ASN A:289
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 289 RESIDUES 2006 TO 2007
06
AC6
SOFTWARE
GLU B:147 , GLU B:150 , SER B:151 , ASN B:154 , THR B:156
BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 154 RESIDUES 2001 TO 2003
07
AC7
SOFTWARE
ASN C:21
BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 21 RESIDUES 3012 TO 3013
08
AC8
SOFTWARE
ASN C:33
BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 33 RESIDUES 3001 TO 3002
09
AC9
SOFTWARE
ASN C:158
BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 158 RESIDUES 3010 TO 3011
10
BC1
SOFTWARE
ASN C:169 , ASN C:240
BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 169 RESIDUES 3003 TO 3007
11
BC2
SOFTWARE
ASN C:289
BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 289 RESIDUES 3008 TO 3009
12
BC3
SOFTWARE
GLU D:147 , GLU D:150 , SER D:151 , ASN D:154
BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 154 RESIDUES 2001 TO 2004
13
BC4
SOFTWARE
ASN E:21 , GLN F:15
BINDING SITE FOR CHAIN E OF SUGAR BOUND TO ASN E 21 RESIDUES 3013 TO 3014
14
BC5
SOFTWARE
ASN E:33
BINDING SITE FOR CHAIN E OF SUGAR BOUND TO ASN E 33 RESIDUES 3001 TO 3002
15
BC6
SOFTWARE
ASN E:158
BINDING SITE FOR CHAIN E OF SUGAR BOUND TO ASN E 158 RESIDUES 3010 TO 3012
16
BC7
SOFTWARE
ASN E:169 , ASN E:240
BINDING SITE FOR CHAIN E OF SUGAR BOUND TO ASN E 169 RESIDUES 3003 TO 3007
17
BC8
SOFTWARE
ASN E:278 , ASN E:289
BINDING SITE FOR CHAIN E OF SUGAR BOUND TO ASN E 289 RESIDUES 3008 TO 3009
18
BC9
SOFTWARE
ASN F:154 , THR F:156
BINDING SITE FOR MONO-SACCHARIDE NAG F2001 BOUND TO ASN F 154
19
CC1
SOFTWARE
ASN I:63
BINDING SITE FOR MONO-SACCHARIDE NAG I 701 BOUND TO ASN I 63
20
CC2
SOFTWARE
ASN K:63
BINDING SITE FOR MONO-SACCHARIDE NAG K 701 BOUND TO ASN K 63
21
CC3
SOFTWARE
ASN L:63
BINDING SITE FOR MONO-SACCHARIDE NAG L 701 BOUND TO ASN L 63
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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all
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Protein
Nucleic
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Hetero
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Solvent
All Atoms
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Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Chain C
Chain D
Chain E
Chain F
Chain G
Chain H
Chain I
Chain J
Chain K
Chain L
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (478 KB)
Header - Asym.Unit
Biol.Unit 1 (465 KB)
Header - Biol.Unit 1
Biol.Unit 2 (262 KB)
Header - Biol.Unit 2
Biol.Unit 3 (77 KB)
Header - Biol.Unit 3
Biol.Unit 4 (77 KB)
Header - Biol.Unit 4
Biol.Unit 5 (78 KB)
Header - Biol.Unit 5
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