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4MES
Biol. Unit 1
Info
Asym.Unit (144 KB)
Biol.Unit 1 (68 KB)
Biol.Unit 2 (69 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THIT COMPLEXED WITH LMG116
Authors
:
L. J. Y. M. Swier, A. Guskov, D. J. Slotboom
Date
:
27 Aug 13 (Deposition) - 27 Aug 14 (Release) - 27 Aug 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
S-Component, Ecf Transporter, Abc Transporter, Thiamine Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. J. Y. M. Swier, L. Gomez, A. Guskov, A. K. H. Hirsch, D. J. Slotboom
Crystal Structures Of Thit With Small Molecule Modulators
To Be Published
[
close entry info
]
Hetero Components
(6, 21)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5... (26Ga)
2b: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5... (26Gb)
3a: B-NONYLGLUCOSIDE (BNGa)
3b: B-NONYLGLUCOSIDE (BNGb)
3c: B-NONYLGLUCOSIDE (BNGc)
3d: B-NONYLGLUCOSIDE (BNGd)
3e: B-NONYLGLUCOSIDE (BNGe)
3f: B-NONYLGLUCOSIDE (BNGf)
3g: B-NONYLGLUCOSIDE (BNGg)
4a: HEXAETHYLENE GLYCOL (P6Ga)
4b: HEXAETHYLENE GLYCOL (P6Gb)
4c: HEXAETHYLENE GLYCOL (P6Gc)
4d: HEXAETHYLENE GLYCOL (P6Gd)
4e: HEXAETHYLENE GLYCOL (P6Ge)
4f: HEXAETHYLENE GLYCOL (P6Gf)
4g: HEXAETHYLENE GLYCOL (P6Gg)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
5b: DI(HYDROXYETHYL)ETHER (PEGb)
5c: DI(HYDROXYETHYL)ETHER (PEGc)
5d: DI(HYDROXYETHYL)ETHER (PEGd)
5e: DI(HYDROXYETHYL)ETHER (PEGe)
5f: DI(HYDROXYETHYL)ETHER (PEGf)
5g: DI(HYDROXYETHYL)ETHER (PEGg)
5h: DI(HYDROXYETHYL)ETHER (PEGh)
5i: DI(HYDROXYETHYL)ETHER (PEGi)
5j: DI(HYDROXYETHYL)ETHER (PEGj)
5k: DI(HYDROXYETHYL)ETHER (PEGk)
5l: DI(HYDROXYETHYL)ETHER (PEGl)
5m: DI(HYDROXYETHYL)ETHER (PEGm)
5n: DI(HYDROXYETHYL)ETHER (PEGn)
5o: DI(HYDROXYETHYL)ETHER (PEGo)
5p: DI(HYDROXYETHYL)ETHER (PEGp)
5q: DI(HYDROXYETHYL)ETHER (PEGq)
6a: 2-(2-METHOXYETHOXY)ETHANOL (PG0a)
6b: 2-(2-METHOXYETHOXY)ETHANOL (PG0b)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
7c: TETRAETHYLENE GLYCOL (PG4c)
7d: TETRAETHYLENE GLYCOL (PG4d)
7e: TETRAETHYLENE GLYCOL (PG4e)
7f: TETRAETHYLENE GLYCOL (PG4f)
7g: TETRAETHYLENE GLYCOL (PG4g)
7h: TETRAETHYLENE GLYCOL (PG4h)
7i: TETRAETHYLENE GLYCOL (PG4i)
7j: TETRAETHYLENE GLYCOL (PG4j)
7k: TETRAETHYLENE GLYCOL (PG4k)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
-1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
26G
1
Ligand/Ion
2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]PHENYL}ETHANOL
3
BNG
2
Ligand/Ion
B-NONYLGLUCOSIDE
4
P6G
4
Ligand/Ion
HEXAETHYLENE GLYCOL
5
PEG
5
Ligand/Ion
DI(HYDROXYETHYL)ETHER
6
PG0
1
Ligand/Ion
2-(2-METHOXYETHOXY)ETHANOL
7
PG4
8
Ligand/Ion
TETRAETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(27, 27)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC8 (SOFTWARE)
25: DC6 (SOFTWARE)
26: EC2 (SOFTWARE)
27: FC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HOH A:360
BINDING SITE FOR RESIDUE BNG A 201
02
AC2
SOFTWARE
ILE A:94 , LEU A:97 , PHE A:98 , VAL A:116 , HOH A:345 , BNG B:201 , BNG B:202
BINDING SITE FOR RESIDUE BNG A 202
03
AC3
SOFTWARE
GLU A:38 , GLU A:84 , TYR A:85 , HIS A:125 , GLY A:129 , TRP A:133 , TYR A:146 , ASN A:151 , PG4 A:210 , HOH A:312 , HOH A:322 , HOH A:336
BINDING SITE FOR RESIDUE 26G A 203
04
AC4
SOFTWARE
VAL A:37 , LEU A:157 , ALA A:161 , PG4 A:208 , LEU B:111
BINDING SITE FOR RESIDUE PG4 A 204
05
AC5
SOFTWARE
LEU A:119 , TYR A:122 , P6G A:221
BINDING SITE FOR RESIDUE PG4 A 205
06
AC6
SOFTWARE
VAL A:164 , ILE A:167 , ILE A:168 , LYS A:172 , VAL B:164
BINDING SITE FOR RESIDUE PG4 A 206
07
AC7
SOFTWARE
SER A:91 , ILE A:94
BINDING SITE FOR RESIDUE PG4 A 207
08
AC8
SOFTWARE
THR A:30 , VAL A:31 , PG4 A:204
BINDING SITE FOR RESIDUE PG4 A 208
09
AC9
SOFTWARE
TRP A:141 , PG0 A:217 , HOH A:367 , HOH A:368
BINDING SITE FOR RESIDUE PG4 A 209
10
BC1
SOFTWARE
ASN A:29 , THR A:30 , GLY A:33 , TRP A:34 , ILE A:36 , TYR A:74 , 26G A:203 , HOH A:322 , HOH A:366 , HOH A:370
BINDING SITE FOR RESIDUE PG4 A 210
11
BC2
SOFTWARE
LEU A:10 , LEU A:11 , ARG A:51 , THR A:54 , ARG A:99 , HIS A:179 , HOH A:307 , HOH A:342
BINDING SITE FOR RESIDUE PG4 A 211
12
BC3
SOFTWARE
VAL A:90
BINDING SITE FOR RESIDUE PEG A 212
13
BC4
SOFTWARE
LEU A:105 , LYS A:106 , LEU A:107 , ALA A:108 , LYS A:171 , TYR B:32
BINDING SITE FOR RESIDUE PEG A 213
14
BC5
SOFTWARE
TRP A:138 , P6G A:221 , PEG B:212
BINDING SITE FOR RESIDUE PEG A 214
15
BC6
SOFTWARE
VAL A:31 , ILE A:153 , LEU B:112 , BNG B:205 , PEG B:212
BINDING SITE FOR RESIDUE PEG A 215
16
BC7
SOFTWARE
TYR A:136 , TYR A:182
BINDING SITE FOR RESIDUE PEG A 216
17
BC8
SOFTWARE
GLY A:142 , ALA A:143 , VAL A:144 , ALA A:145 , PG4 A:209 , HOH A:313 , HOH A:338 , HOH A:352
BINDING SITE FOR RESIDUE PG0 A 217
18
BC9
SOFTWARE
ILE A:75 , LEU A:78 , P6G A:219
BINDING SITE FOR RESIDUE P6G A 218
19
CC1
SOFTWARE
ILE A:69 , THR A:70 , GLY A:71 , P6G A:218
BINDING SITE FOR RESIDUE P6G A 219
20
CC2
SOFTWARE
LEU A:20 , ILE A:24 , ILE A:42 , LEU A:46 , PHE A:169 , LEU A:176
BINDING SITE FOR RESIDUE P6G A 220
21
CC3
SOFTWARE
PHE A:115 , TRP A:141 , ALA A:145 , LEU A:148 , ILE A:156 , PG4 A:205 , PEG A:214 , PEG B:217 , P6G B:225
BINDING SITE FOR RESIDUE P6G A 221
22
CC4
SOFTWARE
ALA A:108 , LEU A:112 , BNG A:202 , VAL B:31 , TYR B:32 , ILE B:35 , TRP B:138 , HOH B:331 , HOH B:341 , HOH B:379
BINDING SITE FOR RESIDUE BNG B 201
23
CC5
SOFTWARE
LEU A:119 , BNG A:202 , LYS B:139 , GLY B:140 , TRP B:141 , ALA B:145 , PEG B:215 , HOH B:341 , HOH B:375 , HOH B:380
BINDING SITE FOR RESIDUE BNG B 202
24
CC8
SOFTWARE
PEG A:215 , PHE B:98 , LEU B:112 , BNG B:204 , HOH B:388 , HOH B:389
BINDING SITE FOR RESIDUE BNG B 205
25
DC6
SOFTWARE
PEG A:214 , PEG A:215 , LEU B:112 , VAL B:116
BINDING SITE FOR RESIDUE PEG B 212
26
EC2
SOFTWARE
P6G A:221 , LEU B:119 , P6G B:225
BINDING SITE FOR RESIDUE PEG B 217
27
FC1
SOFTWARE
LEU A:148 , P6G A:221 , LEU B:119 , PHE B:123 , PHE B:126 , LEU B:148 , PEG B:217
BINDING SITE FOR RESIDUE P6G B 225
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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;
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[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
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CATH Domains
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Pfam Domains
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Info
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[
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Chain A
Asymmetric Unit 1
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