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4M3C
Asym. Unit
Info
Asym.Unit (313 KB)
Biol.Unit 1 (156 KB)
Biol.Unit 2 (155 KB)
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(1)
Title
:
STRUCTURE OF A BINARY COMPLEX BETWEEN HOMOLOGOUS TETRAMERIC LEGUME LECTINS FROM BUTEA MONOSPERMA AND SPATHOLOBUS PARVIFLORUS SEEDS
Authors
:
S. Surya, J. Abhilash, K. Geethanandan, C. Sadasivan, M. Haridas
Date
:
06 Aug 13 (Deposition) - 18 Sep 13 (Release) - 18 Sep 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Sugar Binding Protein, Butea Monosperma Seed Lectin, Bml, Spatholobus Parviflorus Seed Lectin, Spl
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Surya, J. Abhilash, K. Geethanandan, C. Sadasivan, M. Haridas
Structure Of A Binary Complex Between Homologous Tetrameric Legume Lectins From Butea Monosperma And Spatholobus Parviflorus Seeds
To Be Published
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Hetero Components
(4, 25)
Info
All Hetero Components
1a: GAMMA-AMINO-BUTANOIC ACID (ABUa)
1b: GAMMA-AMINO-BUTANOIC ACID (ABUb)
1c: GAMMA-AMINO-BUTANOIC ACID (ABUc)
1d: GAMMA-AMINO-BUTANOIC ACID (ABUd)
1e: GAMMA-AMINO-BUTANOIC ACID (ABUe)
1f: GAMMA-AMINO-BUTANOIC ACID (ABUf)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
4a: MANGANESE (II) ION (MNa)
4b: MANGANESE (II) ION (MNb)
4c: MANGANESE (II) ION (MNc)
4d: MANGANESE (II) ION (MNd)
4e: MANGANESE (II) ION (MNe)
4f: MANGANESE (II) ION (MNf)
4g: MANGANESE (II) ION (MNg)
4h: MANGANESE (II) ION (MNh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ABU
6
Ligand/Ion
GAMMA-AMINO-BUTANOIC ACID
2
CA
8
Ligand/Ion
CALCIUM ION
3
GOL
3
Ligand/Ion
GLYCEROL
4
MN
8
Ligand/Ion
MANGANESE (II) ION
[
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]
Sites
(25, 25)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:128 , TYR A:130 , ASN A:132 , ASP A:137 , HOH A:421 , HOH A:426
BINDING SITE FOR RESIDUE CA A 301
02
AC2
SOFTWARE
GLU A:126 , ASP A:128 , ASP A:137 , HIS A:142 , HOH A:401 , HOH A:422
BINDING SITE FOR RESIDUE MN A 302
03
AC3
SOFTWARE
ASN A:2 , THR A:3 , ASP A:4 , ILE A:57 , ASN A:58 , SER A:235 , THR D:7 , PHE D:8 , ASN D:17
BINDING SITE FOR RESIDUE ABU A 303
04
AC4
SOFTWARE
ASP B:128 , TYR B:130 , ASN B:132 , ASP B:137 , HOH B:430 , HOH B:434
BINDING SITE FOR RESIDUE CA B 301
05
AC5
SOFTWARE
GLU B:126 , ASP B:128 , ASP B:137 , HIS B:142 , HOH B:420 , HOH B:435
BINDING SITE FOR RESIDUE MN B 302
06
AC6
SOFTWARE
ASN B:2 , ASP B:4 , ILE B:57 , ASN B:58 , TRP B:207 , SER B:235 , LYS B:236 , HOH B:408 , ASN C:17
BINDING SITE FOR RESIDUE ABU B 303
07
AC7
SOFTWARE
ASP C:128 , TYR C:130 , ASN C:132 , ASP C:137 , HOH C:423 , HOH C:430
BINDING SITE FOR RESIDUE CA C 301
08
AC8
SOFTWARE
GLU C:126 , ASP C:128 , ASP C:137 , HIS C:142 , HOH C:407 , HOH C:423 , HOH C:429
BINDING SITE FOR RESIDUE MN C 302
09
AC9
SOFTWARE
ASN B:17 , HOH B:403 , HOH B:436 , ASN C:2 , ASP C:4 , ILE C:57 , ASN C:58 , TRP C:207 , SER C:235 , HOH C:426
BINDING SITE FOR RESIDUE ABU C 303
10
BC1
SOFTWARE
LEU C:52 , TYR C:53 , ALA C:54 , VAL C:97 , SER C:98 , SER C:209
BINDING SITE FOR RESIDUE GOL C 304
11
BC2
SOFTWARE
ASP D:128 , TYR D:130 , ASN D:132 , ASP D:137 , HOH D:413 , HOH D:420
BINDING SITE FOR RESIDUE CA D 301
12
BC3
SOFTWARE
GLU D:126 , ASP D:128 , ASP D:137 , HIS D:142 , HOH D:425
BINDING SITE FOR RESIDUE MN D 302
13
BC4
SOFTWARE
THR A:7 , PHE A:8 , LYS A:12 , GLN A:15 , ASN A:17 , ASN D:2 , THR D:3 , ASP D:4 , ASN D:58 , TRP D:207 , HOH D:409
BINDING SITE FOR RESIDUE ABU D 303
14
BC5
SOFTWARE
THR C:171 , VAL C:180 , HOH D:430
BINDING SITE FOR RESIDUE GOL D 304
15
BC6
SOFTWARE
ASP E:128 , TYR E:130 , ASN E:132 , ASP E:137 , HOH E:411 , HOH E:430
BINDING SITE FOR RESIDUE CA E 301
16
BC7
SOFTWARE
GLU E:126 , ASP E:128 , ASP E:137 , HIS E:142 , HOH E:426 , HOH E:428
BINDING SITE FOR RESIDUE MN E 302
17
BC8
SOFTWARE
PRO E:205 , GLU E:206 , TRP E:207
BINDING SITE FOR RESIDUE ABU E 303
18
BC9
SOFTWARE
ASP F:128 , TYR F:130 , ASN F:132 , ASP F:137 , HOH F:411 , HOH F:426
BINDING SITE FOR RESIDUE CA F 301
19
CC1
SOFTWARE
GLU F:126 , ASP F:128 , ASP F:137 , HIS F:142 , HOH F:415 , HOH F:430
BINDING SITE FOR RESIDUE MN F 302
20
CC2
SOFTWARE
HOH F:428
BINDING SITE FOR RESIDUE GOL F 303
21
CC3
SOFTWARE
ASP G:128 , TYR G:130 , ASN G:132 , ASP G:137 , HOH G:431 , HOH G:434
BINDING SITE FOR RESIDUE CA G 301
22
CC4
SOFTWARE
GLU G:126 , ASP G:128 , ASP G:137 , HIS G:142 , HOH G:432 , HOH G:433
BINDING SITE FOR RESIDUE MN G 302
23
CC5
SOFTWARE
ASP H:128 , TYR H:130 , ASN H:132 , ASP H:137 , HOH H:406 , HOH H:411
BINDING SITE FOR RESIDUE CA H 301
24
CC6
SOFTWARE
GLU H:126 , ASP H:128 , ASP H:137 , HIS H:142 , HOH H:433
BINDING SITE FOR RESIDUE MN H 302
25
CC7
SOFTWARE
VAL E:7 , ASN E:17 , GLU H:2 , GLU H:3 , THR H:4 , ILE H:57 , ASN H:58 , TRP H:207 , SER H:235 , HOH H:404 , HOH H:414
BINDING SITE FOR RESIDUE ABU H 303
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4m3ca_ (A:)
1b: SCOP_d4m3cc_ (C:)
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Protein Domains
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(
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Organisms
(
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Legume lectins
(238)
Protein domain
:
automated matches
(63)
Butea monosperma [TaxId: 56060]
(2)
1a
d4m3ca_
A:
1b
d4m3cc_
C:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
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Sorry, no Info available
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Chain D
Chain E
Chain F
Chain G
Chain H
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (313 KB)
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