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4M1J
Asym. Unit
Info
Asym.Unit (253 KB)
Biol.Unit 1 (244 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA PVDQ IN COMPLEX WITH A TRANSITION STATE ANALOGUE
Authors
:
R. Wu, K. Clevenger, J. Er, W. L. Fast, D. Liu
Date
:
02 Aug 13 (Deposition) - 28 Aug 13 (Release) - 06 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,C
Biol. Unit 1: A,C (1x)
Keywords
:
Transition State Analogue, Heterodimer, Acylase, Boronic Acid, Secreted, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. D. Clevenger, R. Wu, J. A. Er, D. Liu, W. Fast
Rational Design Of A Transition State Analogue With Picomolar Affinity For Pseudomonas Aeruginosa Pvdq, A Siderophore Biosynthetic Enzyme.
Acs Chem. Biol. V. 8 2192 2013
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Hetero Components
(2, 21)
Info
All Hetero Components
1a: TRIDECYLBORONIC ACID (B0Sa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
2t: GLYCEROL (GOLt)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
B0S
1
Ligand/Ion
TRIDECYLBORONIC ACID
2
GOL
20
Ligand/Ion
GLYCEROL
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER C:217 , HIS C:239 , PHE C:240 , THR C:285 , VAL C:286 , VAL C:374 , TRP C:378 , ASN C:485 , HOH C:1011
BINDING SITE FOR RESIDUE B0S C 801
02
AC2
SOFTWARE
LEU C:259 , ASP C:260 , ASN C:382 , HOH C:942 , HOH C:943
BINDING SITE FOR RESIDUE GOL C 802
03
AC3
SOFTWARE
PRO A:98 , ILE A:101 , PRO C:256 , GLY C:257 , HIS C:337 , HOH C:1095 , HOH C:1256
BINDING SITE FOR RESIDUE GOL C 803
04
AC4
SOFTWARE
GOL A:205 , HOH A:427 , TYR C:344 , GLY C:345 , PRO C:346 , LEU C:364 , ARG C:365 , ASP C:366 , LEU C:369 , HOH C:1002 , HOH C:1149
BINDING SITE FOR RESIDUE GOL C 804
05
AC5
SOFTWARE
ARG C:365 , ALA C:454 , TRP C:455 , ARG C:457 , ALA C:464 , GLY C:465
BINDING SITE FOR RESIDUE GOL C 805
06
AC6
SOFTWARE
GLU A:72 , SER A:91 , ALA A:92 , ARG A:168 , PRO C:241 , ASN C:243 , GLY C:244 , ALA C:245 , MET C:246
BINDING SITE FOR RESIDUE GOL C 806
07
AC7
SOFTWARE
THR C:372 , ARG C:373 , ALA C:462 , GLN C:463 , HOH C:976 , HOH C:992 , HOH C:1013 , HOH C:1039 , HOH C:1136
BINDING SITE FOR RESIDUE GOL C 807
08
AC8
SOFTWARE
PHE C:596 , ALA C:597 , GLU C:598 , LEU C:599 , GLY C:601 , ALA C:602 , TRP C:603 , HOH C:1015
BINDING SITE FOR RESIDUE GOL C 808
09
AC9
SOFTWARE
ILE C:255 , PRO C:256 , GLY C:257 , ARG C:258 , LEU C:259 , ASP C:260 , HOH C:1118 , HOH C:1229
BINDING SITE FOR RESIDUE GOL C 809
10
BC1
SOFTWARE
GLN C:498 , GLY C:499
BINDING SITE FOR RESIDUE GOL C 810
11
BC2
SOFTWARE
ASN C:485 , ASP C:486 , GLY C:511 , HOH C:1093
BINDING SITE FOR RESIDUE GOL C 811
12
BC3
SOFTWARE
LEU C:580 , ASP C:581 , ARG C:651 , GLY C:653 , ASP C:654 , HOH C:1181
BINDING SITE FOR RESIDUE GOL C 812
13
BC4
SOFTWARE
PRO C:459 , ALA C:461 , HOH C:1123 , HOH C:1131
BINDING SITE FOR RESIDUE GOL C 813
14
BC5
SOFTWARE
ARG C:591 , GLU C:640 , ILE C:646 , ARG C:684
BINDING SITE FOR RESIDUE GOL C 814
15
BC6
SOFTWARE
GLN A:177 , GLY C:442 , LEU C:443 , PRO C:444 , HOH C:1059
BINDING SITE FOR RESIDUE GOL C 815
16
BC7
SOFTWARE
GLU A:172 , GLY A:173 , GLN A:177 , TRP C:402
BINDING SITE FOR RESIDUE GOL A 201
17
BC8
SOFTWARE
LYS A:48 , GLU A:93 , LEU A:94 , ASP A:95 , ASP A:180
BINDING SITE FOR RESIDUE GOL A 202
18
BC9
SOFTWARE
GLN A:113 , TRP A:116 , THR A:159 , ASP A:160 , HOH A:321 , LYS C:643
BINDING SITE FOR RESIDUE GOL A 203
19
CC1
SOFTWARE
PHE A:137 , ALA A:141 , ASP A:142 , GLY A:143 , LYS A:144 , THR A:145 , THR A:146 , HOH A:405
BINDING SITE FOR RESIDUE GOL A 204
20
CC2
SOFTWARE
TRP A:105 , LEU A:106 , ARG A:167 , HOH A:427 , GOL C:804
BINDING SITE FOR RESIDUE GOL A 205
21
CC3
SOFTWARE
ALA A:70 , VAL A:74 , ARG A:77 , GLU A:79 , TYR A:83 , TRP A:153 , ARG A:155 , HOH A:344 , HOH A:354 , HOH A:411
BINDING SITE FOR RESIDUE GOL A 206
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (253 KB)
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Biol.Unit 1 (244 KB)
Header - Biol.Unit 1
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