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Asym. Unit
Info
Asym.Unit (165 KB)
Biol.Unit 1 (154 KB)
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(1)
Title
:
L(M196)H,H(M202)L DOUBLE MUTANT STRUCTURE OF PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES STRAIN RV
Authors
:
A. G. Gabdulkhakov
Date
:
29 Jul 13 (Deposition) - 16 Jul 14 (Release) - 16 Jul 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : H,L,M
Biol. Unit 1: H,L,M (1x)
Keywords
:
Photosynthetic Reaction Center, Primary Electron Donor, Photon, Membrane, Electron Transport, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. G. Kljashtorny, T. Y. Fufina, L. G. Vasilieva, A. G. Gabdulkhakov
Molecular Dynamic Studies Of Reaction Centers Mutants From Rhodobacter Sphaeroides And His Mutant Form L(M196)H+H(M202)L
Crystallogr Rep. V. 59 536 2014
[
close entry info
]
Hetero Components
(13, 45)
Info
All Hetero Components
01a: BACTERIOCHLOROPHYLL A (BCLa)
01b: BACTERIOCHLOROPHYLL A (BCLb)
01c: BACTERIOCHLOROPHYLL A (BCLc)
02a: BACTERIOPHEOPHYTIN A (BPHa)
02b: BACTERIOPHEOPHYTIN A (BPHb)
02c: BACTERIOPHEOPHYTIN A (BPHc)
03a: CARDIOLIPIN (CDLa)
04a: 1,4-DIETHYLENE DIOXIDE (DIOa)
04b: 1,4-DIETHYLENE DIOXIDE (DIOb)
04c: 1,4-DIETHYLENE DIOXIDE (DIOc)
04d: 1,4-DIETHYLENE DIOXIDE (DIOd)
05a: 1,2-ETHANEDIOL (EDOa)
05b: 1,2-ETHANEDIOL (EDOb)
05c: 1,2-ETHANEDIOL (EDOc)
05d: 1,2-ETHANEDIOL (EDOd)
05e: 1,2-ETHANEDIOL (EDOe)
05f: 1,2-ETHANEDIOL (EDOf)
05g: 1,2-ETHANEDIOL (EDOg)
06a: FE (III) ION (FEa)
07a: POTASSIUM ION (Ka)
08a: LAURYL DIMETHYLAMINE-N-OXIDE (LDAa)
08b: LAURYL DIMETHYLAMINE-N-OXIDE (LDAb)
08c: LAURYL DIMETHYLAMINE-N-OXIDE (LDAc)
08d: LAURYL DIMETHYLAMINE-N-OXIDE (LDAd)
08e: LAURYL DIMETHYLAMINE-N-OXIDE (LDAe)
08f: LAURYL DIMETHYLAMINE-N-OXIDE (LDAf)
09a: PHOSPHATE ION (PO4a)
09b: PHOSPHATE ION (PO4b)
09c: PHOSPHATE ION (PO4c)
10a: SPEROIDENONE (SPNa)
11a: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSa)
11b: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSb)
12a: UBIQUINONE-10 (U10a)
12b: UBIQUINONE-10 (U10b)
13a: UNKNOWN LIGAND (UNLa)
13b: UNKNOWN LIGAND (UNLb)
13c: UNKNOWN LIGAND (UNLc)
13d: UNKNOWN LIGAND (UNLd)
13e: UNKNOWN LIGAND (UNLe)
13f: UNKNOWN LIGAND (UNLf)
13g: UNKNOWN LIGAND (UNLg)
13h: UNKNOWN LIGAND (UNLh)
13i: UNKNOWN LIGAND (UNLi)
13j: UNKNOWN LIGAND (UNLj)
13k: UNKNOWN LIGAND (UNLk)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BCL
3
Ligand/Ion
BACTERIOCHLOROPHYLL A
2
BPH
3
Ligand/Ion
BACTERIOPHEOPHYTIN A
3
CDL
1
Ligand/Ion
CARDIOLIPIN
4
DIO
4
Ligand/Ion
1,4-DIETHYLENE DIOXIDE
5
EDO
7
Ligand/Ion
1,2-ETHANEDIOL
6
FE
1
Ligand/Ion
FE (III) ION
7
K
1
Ligand/Ion
POTASSIUM ION
8
LDA
6
Ligand/Ion
LAURYL DIMETHYLAMINE-N-OXIDE
9
PO4
3
Ligand/Ion
PHOSPHATE ION
10
SPN
1
Ligand/Ion
SPEROIDENONE
11
TRS
2
Ligand/Ion
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
12
U10
2
Ligand/Ion
UBIQUINONE-10
13
UNL
11
Ligand/Ion
UNKNOWN LIGAND
[
close Hetero Component info
]
Sites
(33, 33)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN H:32 , TYR H:40 , GLN H:53 , PHE H:56 , HOH H:405 , PHE M:258 , U10 M:406 , LDA M:408
BINDING SITE FOR RESIDUE LDA H 301
02
AC2
SOFTWARE
HIS H:126 , TYR L:73 , LYS L:82 , THR M:21
BINDING SITE FOR RESIDUE PO4 H 306
03
AC3
SOFTWARE
GLU H:94 , PHE H:96 , PHE L:24 , VAL L:26
BINDING SITE FOR RESIDUE DIO H 307
04
AC4
SOFTWARE
ASN H:52 , GLU H:94 , ALA L:1
BINDING SITE FOR RESIDUE EDO H 308
05
AC5
SOFTWARE
ARG H:177 , GLN H:194 , GLY M:230
BINDING SITE FOR RESIDUE EDO H 309
06
AC6
SOFTWARE
ILE H:65 , LEU H:66 , GLY H:69 , ARG H:70 , GLY H:71
BINDING SITE FOR RESIDUE EDO H 310
07
AC7
SOFTWARE
SER H:80 , ASP H:82 , ALA H:116 , ARG M:241
BINDING SITE FOR RESIDUE EDO H 311
08
AC8
SOFTWARE
GLN H:199 , ASN H:201 , ARG H:202
BINDING SITE FOR RESIDUE TRS H 312
09
AC9
SOFTWARE
MET H:134 , ALA H:137 , PHE H:140
BINDING SITE FOR RESIDUE K H 313
10
BC1
SOFTWARE
HIS L:168 , MET L:174 , ILE L:177 , THR L:178 , PHE L:181 , THR L:182 , U10 L:304 , HOH L:408 , LEU M:160 , ILE M:179 , HIS M:182 , LEU M:183 , THR M:186 , BPH M:402 , BPH M:404 , SPN M:407
BINDING SITE FOR RESIDUE BCL L 301
11
BC2
SOFTWARE
PHE L:97 , ALA L:124 , ILE L:125 , ALA L:127 , TYR L:128 , LEU L:131 , VAL L:157 , SER L:158 , PHE L:167 , HIS L:168 , HIS L:173 , ALA L:176 , ILE L:177 , PHE L:180 , SER L:244 , ALA L:245 , CYS L:247 , MET L:248 , BPH L:303 , TYR M:210 , BPH M:402 , BCL M:403 , U10 M:406
BINDING SITE FOR RESIDUE BCL L 302
12
BC3
SOFTWARE
PHE L:41 , ALA L:42 , CYS L:92 , ALA L:93 , ALA L:96 , PHE L:97 , TRP L:100 , GLU L:104 , ILE L:117 , ALA L:120 , PHE L:121 , ALA L:124 , HIS L:153 , VAL L:241 , BCL L:302 , TYR M:210 , ALA M:213 , LEU M:214 , TRP M:252 , MET M:256 , BCL M:403 , U10 M:406
BINDING SITE FOR RESIDUE BPH L 303
13
BC4
SOFTWARE
PRO L:171 , THR L:178 , LEU L:189 , HIS L:190 , LEU L:193 , ASP L:213 , PHE L:216 , SER L:223 , ILE L:224 , GLY L:225 , THR L:226 , ILE L:229 , LEU L:232 , BCL L:301 , DIO M:418
BINDING SITE FOR RESIDUE U10 L 304
14
BC5
SOFTWARE
LYS H:62 , THR H:63 , PHE H:64 , ALA L:198 , ASN L:199 , PRO L:200
BINDING SITE FOR RESIDUE DIO L 309
15
BC6
SOFTWARE
SER L:52 , VAL L:66 , TYR L:67 , LEU L:80 , ALA L:81 , GLY L:83 , LEU L:85
BINDING SITE FOR RESIDUE EDO L 311
16
BC7
SOFTWARE
THR H:90 , TRP L:262
BINDING SITE FOR RESIDUE TRS L 312
17
BC8
SOFTWARE
ALA H:16 , PHE H:20 , PHE H:23 , LEU H:27 , TYR H:30 , ASN L:199 , MET M:142 , GLY M:143 , LYS M:144 , HIS M:145 , TRP M:148 , ARG M:267 , ILE M:270 , LEU M:278
BINDING SITE FOR RESIDUE CDL M 401
18
BC9
SOFTWARE
HIS L:168 , PHE L:181 , BCL L:301 , BCL L:302 , MET M:122 , LEU M:156 , TRP M:157 , LEU M:160 , THR M:186 , ASN M:187 , PHE M:189 , SER M:190 , HIS M:196 , PHE M:197 , LEU M:202 , SER M:205 , ILE M:206 , TYR M:210 , VAL M:276 , GLY M:280 , ILE M:284 , BPH M:404
BINDING SITE FOR RESIDUE BPH M 402
19
CC1
SOFTWARE
TYR L:128 , LEU L:131 , HIS L:153 , LEU L:154 , BCL L:302 , BPH L:303 , GLY M:203 , ILE M:206 , ALA M:207 , TYR M:210 , LEU M:214 , LDA M:408
BINDING SITE FOR RESIDUE BCL M 403
20
CC2
SOFTWARE
PHE L:181 , ALA L:184 , LEU L:185 , LEU L:189 , LEU L:219 , BCL L:301 , SER M:59 , LEU M:60 , GLY M:63 , TRP M:66 , PHE M:67 , VAL M:126 , TRP M:129 , THR M:146 , ALA M:149 , PHE M:150 , ALA M:153 , ALA M:273 , THR M:277 , BPH M:402
BINDING SITE FOR RESIDUE BPH M 404
21
CC3
SOFTWARE
HIS L:190 , HIS L:230 , HIS M:219 , GLU M:234 , HIS M:266
BINDING SITE FOR RESIDUE FE M 405
22
CC4
SOFTWARE
LDA H:301 , PHE L:29 , GLY L:35 , TRP L:100 , BCL L:302 , BPH L:303 , MET M:218 , HIS M:219 , THR M:222 , ALA M:248 , ALA M:249 , TRP M:252 , MET M:256 , ASN M:259 , ALA M:260 , ILE M:265 , TRP M:268 , MET M:272
BINDING SITE FOR RESIDUE U10 M 406
23
CC5
SOFTWARE
BCL L:301 , PHE M:67 , PHE M:68 , ILE M:70 , GLY M:71 , TRP M:75 , TRP M:115 , SER M:119 , PHE M:120 , MET M:122 , PHE M:123 , TRP M:157 , GLY M:161 , PHE M:162 , TRP M:171 , TYR M:177 , GLY M:178 , ILE M:179 , HIS M:182
BINDING SITE FOR RESIDUE SPN M 407
24
CC6
SOFTWARE
TRP H:21 , LDA H:301 , PRO M:200 , LEU M:204 , MET M:272 , BCL M:403
BINDING SITE FOR RESIDUE LDA M 408
25
CC7
SOFTWARE
PHE M:7 , LEU M:38 , TRP M:41
BINDING SITE FOR RESIDUE LDA M 409
26
CC8
SOFTWARE
VAL L:220 , GLY L:221 , SER M:30 , GLY M:31 , VAL M:32 , GLY M:33 , GLY M:48
BINDING SITE FOR RESIDUE LDA M 410
27
CC9
SOFTWARE
PHE M:105 , ALA M:106 , ALA M:107 , LEU M:109
BINDING SITE FOR RESIDUE LDA M 411
28
DC1
SOFTWARE
GLY L:57 , ARG M:13 , GLY M:33 , PRO M:34 , PHE M:35 , THR M:37
BINDING SITE FOR RESIDUE LDA M 412
29
DC2
SOFTWARE
ASN M:28 , TYR M:51 , GLY M:53 , SER M:54
BINDING SITE FOR RESIDUE PO4 M 416
30
DC3
SOFTWARE
TYR M:3 , GLN M:4 , ASN M:5 , ILE M:6 , PHE M:7
BINDING SITE FOR RESIDUE PO4 M 417
31
DC4
SOFTWARE
TRP L:266 , U10 L:304 , PHE M:90
BINDING SITE FOR RESIDUE DIO M 418
32
DC5
SOFTWARE
LEU H:241 , ILE L:113 , TYR L:115 , GLU M:2 , ARG M:228
BINDING SITE FOR RESIDUE EDO M 419
33
DC6
SOFTWARE
GLN H:194 , HIS L:116 , TYR M:3 , GLN M:4 , LEU M:224 , ALA M:225 , SER M:227 , ARG M:228
BINDING SITE FOR RESIDUE EDO M 420
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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