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Getting 'PROSITE' information from database.
4LL7
Biol. Unit 3
Info
Asym.Unit (142 KB)
Biol.Unit 1 (38 KB)
Biol.Unit 2 (36 KB)
Biol.Unit 3 (36 KB)
Biol.Unit 4 (36 KB)
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(1)
Title
:
STRUCTURE OF SHE3P AMINO TERMINUS.
Authors
:
H. Shi, N. Singh, F. Esselborn, G. Blobel
Date
:
09 Jul 13 (Deposition) - 12 Feb 14 (Release) - 21 May 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.31
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Biol. Unit 3: E,H (1x)
Biol. Unit 4: F,G (1x)
Keywords
:
She3P, Myosin Cargo Adaptor Protein, Mrna Translocation, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Shi, N. Singh, F. Esselborn, G. Blobel
Structure Of A Myosinbulletadaptor Complex And Pairing By Cargo.
Proc. Natl. Acad. Sci. Usa V. 111 E1082 2014
[
close entry info
]
Hetero Components
(3, 7)
Info
All Hetero Components
1a: 2,3-DIHYDROXY-1,4-DITHIOBUTANE (DTTa)
2a: DYSPROSIUM ION (DYa)
2b: DYSPROSIUM ION (DYb)
2c: DYSPROSIUM ION (DYc)
2d: DYSPROSIUM ION (DYd)
2e: DYSPROSIUM ION (DYe)
2f: DYSPROSIUM ION (DYf)
2g: DYSPROSIUM ION (DYg)
2h: DYSPROSIUM ION (DYh)
2i: DYSPROSIUM ION (DYi)
2j: DYSPROSIUM ION (DYj)
2k: DYSPROSIUM ION (DYk)
2l: DYSPROSIUM ION (DYl)
2m: DYSPROSIUM ION (DYm)
2n: DYSPROSIUM ION (DYn)
2o: DYSPROSIUM ION (DYo)
2p: DYSPROSIUM ION (DYp)
2q: DYSPROSIUM ION (DYq)
2r: DYSPROSIUM ION (DYr)
2s: DYSPROSIUM ION (DYs)
2t: DYSPROSIUM ION (DYt)
2u: DYSPROSIUM ION (DYu)
2v: DYSPROSIUM ION (DYv)
2w: DYSPROSIUM ION (DYw)
2x: DYSPROSIUM ION (DYx)
2y: DYSPROSIUM ION (DYy)
2z: DYSPROSIUM ION (DYz)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
4a: ISOPROPYL ALCOHOL (IPAa)
4b: ISOPROPYL ALCOHOL (IPAb)
4c: ISOPROPYL ALCOHOL (IPAc)
4d: ISOPROPYL ALCOHOL (IPAd)
4e: ISOPROPYL ALCOHOL (IPAe)
4f: ISOPROPYL ALCOHOL (IPAf)
5a: PLATINUM (II) ION (PTa)
5b: PLATINUM (II) ION (PTb)
5c: PLATINUM (II) ION (PTc)
5d: PLATINUM (II) ION (PTd)
5e: PLATINUM (II) ION (PTe)
5f: PLATINUM (II) ION (PTf)
6a: SULFATE ION (SO4a)
6aa: SULFATE ION (SO4aa)
6ab: SULFATE ION (SO4ab)
6ac: SULFATE ION (SO4ac)
6b: SULFATE ION (SO4b)
6c: SULFATE ION (SO4c)
6d: SULFATE ION (SO4d)
6e: SULFATE ION (SO4e)
6f: SULFATE ION (SO4f)
6g: SULFATE ION (SO4g)
6h: SULFATE ION (SO4h)
6i: SULFATE ION (SO4i)
6j: SULFATE ION (SO4j)
6k: SULFATE ION (SO4k)
6l: SULFATE ION (SO4l)
6m: SULFATE ION (SO4m)
6n: SULFATE ION (SO4n)
6o: SULFATE ION (SO4o)
6p: SULFATE ION (SO4p)
6q: SULFATE ION (SO4q)
6r: SULFATE ION (SO4r)
6s: SULFATE ION (SO4s)
6t: SULFATE ION (SO4t)
6u: SULFATE ION (SO4u)
6v: SULFATE ION (SO4v)
6w: SULFATE ION (SO4w)
6x: SULFATE ION (SO4x)
6y: SULFATE ION (SO4y)
6z: SULFATE ION (SO4z)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DTT
-1
Ligand/Ion
2,3-DIHYDROXY-1,4-DITHIOBUTANE
2
DY
-1
Ligand/Ion
DYSPROSIUM ION
3
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
4
IPA
1
Ligand/Ion
ISOPROPYL ALCOHOL
5
PT
-1
Ligand/Ion
PLATINUM (II) ION
6
SO4
3
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(36, 36)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC9 (SOFTWARE)
05: BC2 (SOFTWARE)
06: BC6 (SOFTWARE)
07: BC8 (SOFTWARE)
08: BC9 (SOFTWARE)
09: CC1 (SOFTWARE)
10: CC3 (SOFTWARE)
11: CC4 (SOFTWARE)
12: CC8 (SOFTWARE)
13: DC3 (SOFTWARE)
14: DC5 (SOFTWARE)
15: DC9 (SOFTWARE)
16: EC1 (SOFTWARE)
17: EC2 (SOFTWARE)
18: EC4 (SOFTWARE)
19: EC5 (SOFTWARE)
20: EC6 (SOFTWARE)
21: EC7 (SOFTWARE)
22: EC8 (SOFTWARE)
23: EC9 (SOFTWARE)
24: FC1 (SOFTWARE)
25: FC2 (SOFTWARE)
26: FC3 (SOFTWARE)
27: FC4 (SOFTWARE)
28: FC5 (SOFTWARE)
29: FC6 (SOFTWARE)
30: HC1 (SOFTWARE)
31: HC5 (SOFTWARE)
32: HC6 (SOFTWARE)
33: HC7 (SOFTWARE)
34: HC8 (SOFTWARE)
35: HC9 (SOFTWARE)
36: IC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:125 , GLU A:128 , GLU B:113 , HOH B:305 , GLU E:113 , DY E:202
BINDING SITE FOR RESIDUE DY A 201
02
AC2
SOFTWARE
GLU A:113 , GLU E:125 , DY E:201 , HOH E:304
BINDING SITE FOR RESIDUE DY A 202
03
AC5
SOFTWARE
ASN A:121 , HOH B:304 , SER E:117 , ASN E:121
BINDING SITE FOR RESIDUE SO4 A 205
04
AC9
SOFTWARE
GLN A:62 , HOH E:320 , LYS F:58
BINDING SITE FOR RESIDUE SO4 A 210
05
BC2
SOFTWARE
ASN A:121 , ASN A:124 , GLU A:125 , HOH A:316 , LYS B:110 , DY E:202 , HOH E:326
BINDING SITE FOR RESIDUE DTT A 212
06
BC6
SOFTWARE
ARG B:122 , SER E:100 , EDO E:209 , ASN H:97 , EDO H:206
BINDING SITE FOR RESIDUE SO4 B 204
07
BC8
SOFTWARE
ASN B:97 , SER D:100 , ARG H:122
BINDING SITE FOR RESIDUE SO4 B 206
08
BC9
SOFTWARE
ASP B:115 , GLU B:118 , LEU B:119 , ARG B:122 , HOH B:319 , ILE H:101 , LYS H:105 , EDO H:206
BINDING SITE FOR RESIDUE SO4 B 207
09
CC1
SOFTWARE
MET B:130 , ASN E:95
BINDING SITE FOR RESIDUE PT B 208
10
CC3
SOFTWARE
GLU C:125 , GLU C:128 , HOH C:321 , GLU D:113 , GLU H:113
BINDING SITE FOR RESIDUE DY C 201
11
CC4
SOFTWARE
GLU C:113 , GLU G:113 , HOH G:317 , GLU H:125 , GLU H:128
BINDING SITE FOR RESIDUE DY C 202
12
CC8
SOFTWARE
ASN B:87 , LEU B:91 , LYS H:129
BINDING SITE FOR RESIDUE SO4 C 206
13
DC3
SOFTWARE
ASP D:115 , GLU D:118 , LEU D:119 , ARG D:122 , HOH D:308 , ILE E:101 , LYS E:105 , SO4 H:205
BINDING SITE FOR RESIDUE SO4 C 210
14
DC5
SOFTWARE
ASN C:121 , ASN H:121
BINDING SITE FOR RESIDUE IPA C 212
15
DC9
SOFTWARE
ARG D:122 , ASN E:97 , ILE E:101 , IPA E:210 , SER H:100
BINDING SITE FOR RESIDUE SO4 D 204
16
EC1
SOFTWARE
GLN D:126 , LYS D:129 , LEU E:90 , LEU E:91 , GLU E:94
BINDING SITE FOR RESIDUE SO4 D 205
17
EC2
SOFTWARE
ASN D:95 , MET H:130
BINDING SITE FOR RESIDUE PT D 206
18
EC4
SOFTWARE
ARG B:104 , ARG D:104 , LYS D:105 , SO4 E:206
BINDING SITE FOR RESIDUE EDO D 208
19
EC5
SOFTWARE
GLU D:94 , ASN D:97 , ARG E:122
BINDING SITE FOR RESIDUE IPA D 209
20
EC6
SOFTWARE
GLU A:113 , DY A:202 , GLU E:125 , GLU E:128 , HOH E:319 , GLU F:113
BINDING SITE FOR RESIDUE DY E 201
21
EC7
SOFTWARE
GLU A:125 , DY A:201 , DTT A:212 , GLU E:113
BINDING SITE FOR RESIDUE DY E 202
22
EC8
SOFTWARE
ASP E:115
BINDING SITE FOR RESIDUE DY E 203
23
EC9
SOFTWARE
GLU E:118
BINDING SITE FOR RESIDUE DY E 204
24
FC1
SOFTWARE
GLU E:103
BINDING SITE FOR RESIDUE DY E 205
25
FC2
SOFTWARE
ASN D:97 , ILE D:101 , EDO D:208 , ARG E:122
BINDING SITE FOR RESIDUE SO4 E 206
26
FC3
SOFTWARE
ASN B:95 , MET E:130
BINDING SITE FOR RESIDUE PT E 207
27
FC4
SOFTWARE
ILE D:101 , ASP E:115 , GLU E:118 , ARG E:122
BINDING SITE FOR RESIDUE EDO E 208
28
FC5
SOFTWARE
SO4 B:204 , ASN E:93 , HOH E:322
BINDING SITE FOR RESIDUE EDO E 209
29
FC6
SOFTWARE
SO4 D:204 , ASN E:97 , GLU H:96 , ASN H:97 , HOH H:326
BINDING SITE FOR RESIDUE IPA E 210
30
HC1
SOFTWARE
LYS C:114 , SO4 G:208 , HOH H:318
BINDING SITE FOR RESIDUE SO4 G 205
31
HC5
SOFTWARE
ASP H:115
BINDING SITE FOR RESIDUE DY H 201
32
HC6
SOFTWARE
GLU C:125 , LYS H:110 , GLU H:113 , HOH H:313
BINDING SITE FOR RESIDUE DY H 202
33
HC7
SOFTWARE
GLU H:103
BINDING SITE FOR RESIDUE DY H 203
34
HC8
SOFTWARE
ARG E:104 , ARG H:104 , LYS H:108
BINDING SITE FOR RESIDUE SO4 H 204
35
HC9
SOFTWARE
SO4 C:210 , ARG E:104 , LYS E:105 , ARG H:104
BINDING SITE FOR RESIDUE SO4 H 205
36
IC1
SOFTWARE
SO4 B:204 , SO4 B:207 , HOH B:319 , ARG E:104 , ARG H:104 , LYS H:105
BINDING SITE FOR RESIDUE EDO H 206
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
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Hetero
Ligand
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain E
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (142 KB)
Header - Asym.Unit
Biol.Unit 1 (38 KB)
Header - Biol.Unit 1
Biol.Unit 2 (36 KB)
Header - Biol.Unit 2
Biol.Unit 3 (36 KB)
Header - Biol.Unit 3
Biol.Unit 4 (36 KB)
Header - Biol.Unit 4
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