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4LKD
Biol. Unit 1
Info
Asym.Unit (185 KB)
Biol.Unit 1 (92 KB)
Biol.Unit 2 (91 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA LECTIN LECA COMPLEXED WITH GALA-QRS AT 2.31 A RESOLUTION
Authors
:
R. U. Kadam, A. Stocker, J. -L. Reymond
Date
:
07 Jul 13 (Deposition) - 18 Dec 13 (Release) - 18 Dec 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.31
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,C,D,E,I,K,L,M (1x)
Biol. Unit 2: B,F,G,H,J,N,O,P (1x)
Keywords
:
Lectin Fold, Sugar Binding Protein, Galactose, Sugar Binding Protein- Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. U. Kadam, M. Bergmann, D. Garg, G. Gabrieli, A. Stocker, T. Darbre, J. -L. Reymond
Structure-Based Optimization Of The Terminal Tripeptide In Glycopeptide Dendrimer Inhibitors Of Pseudomonas Aeruginosa Biofilms Targeting Leca.
Chemistry V. 19 17054 2013
[
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
2a: BETA-D-GALACTOSE (GALa)
2b: BETA-D-GALACTOSE (GALb)
2c: BETA-D-GALACTOSE (GALc)
2d: BETA-D-GALACTOSE (GALd)
2e: BETA-D-GALACTOSE (GALe)
2f: BETA-D-GALACTOSE (GALf)
2g: BETA-D-GALACTOSE (GALg)
2h: BETA-D-GALACTOSE (GALh)
3a: P-HYDROXYBENZOIC ACID (PHBa)
3b: P-HYDROXYBENZOIC ACID (PHBb)
3c: P-HYDROXYBENZOIC ACID (PHBc)
3d: P-HYDROXYBENZOIC ACID (PHBd)
3e: P-HYDROXYBENZOIC ACID (PHBe)
3f: P-HYDROXYBENZOIC ACID (PHBf)
3g: P-HYDROXYBENZOIC ACID (PHBg)
3h: P-HYDROXYBENZOIC ACID (PHBh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
GAL
4
Ligand/Ion
BETA-D-GALACTOSE
3
PHB
4
Ligand/Ion
P-HYDROXYBENZOIC ACID
[
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC6 (SOFTWARE)
05: AC7 (SOFTWARE)
06: AC8 (SOFTWARE)
07: AC9 (SOFTWARE)
08: BC1 (SOFTWARE)
09: BC4 (SOFTWARE)
10: BC6 (SOFTWARE)
11: BC8 (SOFTWARE)
12: CC1 (SOFTWARE)
13: CC2 (SOFTWARE)
14: CC3 (SOFTWARE)
15: CC5 (SOFTWARE)
16: CC6 (SOFTWARE)
17: CC7 (SOFTWARE)
18: CC9 (SOFTWARE)
19: DC1 (SOFTWARE)
20: DC2 (SOFTWARE)
21: DC4 (SOFTWARE)
22: DC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:36 , HIS A:50 , GLN A:53 , ASP A:100 , VAL A:101 , THR A:104 , ASN A:107 , CA A:202 , HOH A:306 , HOH A:309 , HOH A:317 , PHB I:301
BINDING SITE FOR RESIDUE GAL A 201
02
AC2
SOFTWARE
TYR A:36 , ASP A:100 , THR A:104 , ASN A:107 , ASN A:108 , GAL A:201
BINDING SITE FOR RESIDUE CA A 202
03
AC5
SOFTWARE
TYR C:36 , HIS C:50 , GLN C:53 , ASP C:100 , VAL C:101 , THR C:104 , ASN C:107 , CA C:202 , HOH C:302 , HOH C:333 , PHB K:301 , GLN P:202
BINDING SITE FOR RESIDUE GAL C 201
04
AC6
SOFTWARE
TYR C:36 , ASP C:100 , THR C:104 , ASN C:107 , ASN C:108 , GAL C:201
BINDING SITE FOR RESIDUE CA C 202
05
AC7
SOFTWARE
TYR D:36 , HIS D:50 , GLN D:53 , ASP D:100 , THR D:104 , ASN D:107 , CA D:202 , HOH D:307 , HOH D:310 , HOH D:311 , GLY G:54 , PHB L:301
BINDING SITE FOR RESIDUE GAL D 201
06
AC8
SOFTWARE
TYR D:36 , ASP D:100 , THR D:104 , ASN D:107 , ASN D:108 , GAL D:201
BINDING SITE FOR RESIDUE CA D 202
07
AC9
SOFTWARE
GLY A:54 , HIS A:58 , HOH A:312 , TYR E:36 , HIS E:50 , GLN E:53 , ASP E:100 , THR E:104 , ASN E:107 , CA E:202 , HOH E:308 , HOH E:311 , PHB M:301
BINDING SITE FOR RESIDUE GAL E 201
08
BC1
SOFTWARE
TYR E:36 , ASP E:100 , THR E:104 , ASN E:107 , ASN E:108 , GAL E:201
BINDING SITE FOR RESIDUE CA E 202
09
BC4
SOFTWARE
TYR G:36 , HIS G:50 , GLN G:53 , ASP G:100 , THR G:104 , ASN G:107 , CA G:202 , HOH G:302 , HOH G:322 , HOH G:334 , HOH L:401 , PHB O:301
BINDING SITE FOR RESIDUE GAL G 201
10
BC6
SOFTWARE
GLY C:54 , HOH C:308 , TYR H:36 , HIS H:50 , GLN H:53 , ASP H:100 , THR H:104 , ASN H:107 , CA H:202 , HOH H:304 , HOH H:318 , PHB P:301
BINDING SITE FOR RESIDUE GAL H 201
11
BC8
SOFTWARE
HIS A:50 , GAL A:201 , GLN I:202 , ARG I:203 , SER I:204
BINDING SITE FOR RESIDUE PHB I 301
12
CC1
SOFTWARE
HIS C:50 , GAL C:201 , GLN K:202 , ARG K:203 , HOH K:402 , HOH K:403 , HOH K:405
BINDING SITE FOR RESIDUE PHB K 301
13
CC2
SOFTWARE
HIS D:50 , GAL D:201 , HOH D:368 , GLN G:53 , GLN L:202 , ARG L:203
BINDING SITE FOR RESIDUE PHB L 301
14
CC3
SOFTWARE
ASP A:52 , GLN A:53 , HOH A:384 , HIS E:50 , GAL E:201 , SER I:204 , GLN M:202
BINDING SITE FOR RESIDUE PHB M 301
15
CC5
SOFTWARE
HIS G:50 , GAL G:201 , ALA L:205 , GLN O:202
BINDING SITE FOR RESIDUE PHB O 301
16
CC6
SOFTWARE
GLN C:53 , HIS H:50 , GAL H:201 , GLN P:202
BINDING SITE FOR RESIDUE PHB P 301
17
CC7
SOFTWARE
GLN A:53 , PHB I:301 , HOH I:401 , HOH I:402 , GLN M:202 , ARG M:203 , SER M:204 , PHB M:301
BINDING SITE FOR CHAIN I OF PEPTIDE QRSA
18
CC9
SOFTWARE
GLN C:53 , PHB K:301 , HOH K:403 , HOH K:406 , HOH K:407 , GLN P:202
BINDING SITE FOR CHAIN K OF PEPTIDE QRSA
19
DC1
SOFTWARE
GLN D:53 , GLN G:53 , VAL G:101 , THR G:104 , HOH G:412 , PHB L:301 , HOH L:404 , GLN O:202 , ARG O:203 , PHB O:301
BINDING SITE FOR CHAIN L OF PEPTIDE QRSA
20
DC2
SOFTWARE
GLU E:49 , ALA F:12 , ARG I:203 , SER I:204 , ALA I:205 , PHB M:301 , HOH M:401
BINDING SITE FOR CHAIN M OF PEPTIDE QRSA
21
DC4
SOFTWARE
GLU D:49 , PRO G:51 , SER L:204 , ALA L:205 , PHB O:301 , HOH O:401 , HOH O:402
BINDING SITE FOR CHAIN O OF PEPTIDE QRSA
22
DC5
SOFTWARE
GLN C:53 , GAL C:201 , GLU H:49 , PRO H:51 , HOH H:396 , GLN K:202 , HOH K:407 , PHB P:301
BINDING SITE FOR CHAIN P OF PEPTIDE QRSA
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (185 KB)
Header - Asym.Unit
Biol.Unit 1 (92 KB)
Header - Biol.Unit 1
Biol.Unit 2 (91 KB)
Header - Biol.Unit 2
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