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4LHP
Asym. Unit
Info
Asym.Unit (269 KB)
Biol.Unit 1 (69 KB)
Biol.Unit 2 (70 KB)
Biol.Unit 3 (68 KB)
Biol.Unit 4 (68 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF NATIVE FG41MALONATE SEMIALDEHYDE DECARBOXYLASE
Authors
:
Y. Guo, H. Serrano, G. J. Poelarends, W. H. Johnson Jr. , M. L. Hackert, C. P. Whitman
Date
:
01 Jul 13 (Deposition) - 24 Jul 13 (Release) - 26 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.02
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Biol. Unit 3: G,H,I (1x)
Biol. Unit 4: J,K,L (1x)
Keywords
:
The Tautomerase Superfamily, Beta-Alpha-Beta-Motif, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Guo, H. Serrano, G. J. Poelarends, W. H. Johnson, M. L. Hackert, C. P. Whitman
Kinetic, Mutational, And Structural Analysis Of Malonate Semialdehyde Decarboxylase From Coryneform Bacterium Strain Fg41: Mechanistic Implications For The Decarboxylase And Hydratase Activities.
Biochemistry V. 52 4830 2013
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: PHOSPHATE ION (PO4a)
1b: PHOSPHATE ION (PO4b)
1c: PHOSPHATE ION (PO4c)
1d: PHOSPHATE ION (PO4d)
1e: PHOSPHATE ION (PO4e)
1f: PHOSPHATE ION (PO4f)
1g: PHOSPHATE ION (PO4g)
1h: PHOSPHATE ION (PO4h)
1i: PHOSPHATE ION (PO4i)
1j: PHOSPHATE ION (PO4j)
1k: PHOSPHATE ION (PO4k)
1l: PHOSPHATE ION (PO4l)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PO4
12
Ligand/Ion
PHOSPHATE ION
2
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:1 , ASP A:37 , THR A:72 , GLN A:73 , TYR A:123 , PRO A:131
BINDING SITE FOR RESIDUE PO4 A 201
02
AC2
SOFTWARE
PRO B:1 , THR B:72 , GLN B:73 , TRP B:114 , TYR B:123 , PRO B:131 , HOH B:365 , HOH B:391
BINDING SITE FOR RESIDUE PO4 B 201
03
AC3
SOFTWARE
PRO C:1 , ASP C:37 , THR C:72 , GLN C:73 , TYR C:123 , PRO C:131 , HOH C:386
BINDING SITE FOR RESIDUE PO4 C 201
04
AC4
SOFTWARE
PRO D:1 , ASP D:37 , THR D:72 , GLN D:73 , TRP D:114 , TYR D:123 , PRO D:131
BINDING SITE FOR RESIDUE PO4 D 201
05
AC5
SOFTWARE
PRO E:111 , HIS E:112 , TRP E:114 , ALA E:121 , GLN E:122 , TYR E:123 , VAL E:124
BINDING SITE FOR RESIDUE SO4 E 201
06
AC6
SOFTWARE
PRO E:1 , ASP E:37 , THR E:72 , GLN E:73 , PRO E:131 , HOH E:401
BINDING SITE FOR RESIDUE PO4 E 202
07
AC7
SOFTWARE
ARG F:76 , THR F:77 , THR F:80 , HOH K:354 , ALA L:35
BINDING SITE FOR RESIDUE SO4 F 201
08
AC8
SOFTWARE
PRO F:1 , THR F:72 , GLN F:73 , TYR F:123 , HOH F:400
BINDING SITE FOR RESIDUE PO4 F 202
09
AC9
SOFTWARE
PRO G:1 , ASP G:37 , THR G:72 , GLN G:73 , TYR G:123 , HOH G:313
BINDING SITE FOR RESIDUE PO4 G 201
10
BC1
SOFTWARE
PRO H:1 , ASP H:37 , THR H:72 , GLN H:73 , TRP H:114 , TYR H:123 , HOH H:381
BINDING SITE FOR RESIDUE PO4 H 201
11
BC2
SOFTWARE
PRO I:1 , THR I:72 , GLN I:73 , TRP I:114 , TYR I:123 , HOH I:381
BINDING SITE FOR RESIDUE PO4 I 201
12
BC3
SOFTWARE
PRO J:1 , PHE J:71 , THR J:72 , GLN J:73 , TYR J:123 , HOH J:310
BINDING SITE FOR RESIDUE PO4 J 201
13
BC4
SOFTWARE
PRO K:1 , THR K:72 , GLN K:73 , TRP K:114 , TYR K:123 , HOH K:382
BINDING SITE FOR RESIDUE PO4 K 201
14
BC5
SOFTWARE
PRO L:1 , ASP L:37 , THR L:72 , GLN L:73 , TRP L:114 , TYR L:123
BINDING SITE FOR RESIDUE PO4 L 201
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(0, 0)
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All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d4lhpa_ (A:)
1b: SCOP_d4lhpb_ (B:)
1c: SCOP_d4lhpk_ (K:)
1d: SCOP_d4lhpl_ (L:)
1e: SCOP_d4lhpc_ (C:)
1f: SCOP_d4lhpd_ (D:)
1g: SCOP_d4lhpe_ (E:)
1h: SCOP_d4lhpf_ (F:)
1i: SCOP_d4lhpg_ (G:)
1j: SCOP_d4lhph_ (H:)
1k: SCOP_d4lhpi_ (I:)
1l: SCOP_d4lhpj_ (J:)
View:
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Classes
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Tautomerase/MIF
(104)
Superfamily
:
Tautomerase/MIF
(104)
Family
:
automated matches
(26)
Protein domain
:
automated matches
(26)
Coryneform bacterium [TaxId: 1728]
(4)
1a
d4lhpa_
A:
1b
d4lhpb_
B:
1c
d4lhpk_
K:
1d
d4lhpl_
L:
1e
d4lhpc_
C:
1f
d4lhpd_
D:
1g
d4lhpe_
E:
1h
d4lhpf_
F:
1i
d4lhpg_
G:
1j
d4lhph_
H:
1k
d4lhpi_
I:
1l
d4lhpj_
J:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (269 KB)
Header - Asym.Unit
Biol.Unit 1 (69 KB)
Header - Biol.Unit 1
Biol.Unit 2 (70 KB)
Header - Biol.Unit 2
Biol.Unit 3 (68 KB)
Header - Biol.Unit 3
Biol.Unit 4 (68 KB)
Header - Biol.Unit 4
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