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4LEF
Asym. Unit
Info
Asym.Unit (810 KB)
Biol.Unit 1 (106 KB)
Biol.Unit 2 (107 KB)
Biol.Unit 3 (108 KB)
Biol.Unit 4 (108 KB)
Biol.Unit 5 (106 KB)
Biol.Unit 6 (107 KB)
Biol.Unit 7 (107 KB)
Biol.Unit 8 (107 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PHOSPHOTRIESTERASE HOMOLOGY PROTEIN FROM ESCHERICHIA COLI COMPLEXED WITH PHOSPHATE IN ACTIVE SITE
Authors
:
A. A. Fedorov, E. V. Fedorov, D. F. Xiang, F. M. Raushel, S. C. Almo
Date
:
25 Jun 13 (Deposition) - 25 Jun 14 (Release) - 25 Jun 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.84
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: C (1x)
Biol. Unit 2: D (1x)
Biol. Unit 3: A (1x)
Biol. Unit 4: B (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Keywords
:
Php Fold, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. A. Fedorov, E. V. Fedorov, D. F. Xiang, F. M. Raushel, S. C. Almo
Crystal Structure Of Phosphotriesterase Homology Protein From Escherichia Coli Complexed With Phosphate In Active Site
To Be Published
[
close entry info
]
Hetero Components
(3, 48)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
2a: PHOSPHATE ION (PO4a)
2aa: PHOSPHATE ION (PO4aa)
2ab: PHOSPHATE ION (PO4ab)
2ac: PHOSPHATE ION (PO4ac)
2ad: PHOSPHATE ION (PO4ad)
2ae: PHOSPHATE ION (PO4ae)
2b: PHOSPHATE ION (PO4b)
2c: PHOSPHATE ION (PO4c)
2d: PHOSPHATE ION (PO4d)
2e: PHOSPHATE ION (PO4e)
2f: PHOSPHATE ION (PO4f)
2g: PHOSPHATE ION (PO4g)
2h: PHOSPHATE ION (PO4h)
2i: PHOSPHATE ION (PO4i)
2j: PHOSPHATE ION (PO4j)
2k: PHOSPHATE ION (PO4k)
2l: PHOSPHATE ION (PO4l)
2m: PHOSPHATE ION (PO4m)
2n: PHOSPHATE ION (PO4n)
2o: PHOSPHATE ION (PO4o)
2p: PHOSPHATE ION (PO4p)
2q: PHOSPHATE ION (PO4q)
2r: PHOSPHATE ION (PO4r)
2s: PHOSPHATE ION (PO4s)
2t: PHOSPHATE ION (PO4t)
2u: PHOSPHATE ION (PO4u)
2v: PHOSPHATE ION (PO4v)
2w: PHOSPHATE ION (PO4w)
2x: PHOSPHATE ION (PO4x)
2y: PHOSPHATE ION (PO4y)
2z: PHOSPHATE ION (PO4z)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
3j: ZINC ION (ZNj)
3k: ZINC ION (ZNk)
3l: ZINC ION (ZNl)
3m: ZINC ION (ZNm)
3n: ZINC ION (ZNn)
3o: ZINC ION (ZNo)
3p: ZINC ION (ZNp)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
1
Ligand/Ion
BETA-D-GLUCOSE
2
PO4
31
Ligand/Ion
PHOSPHATE ION
3
ZN
16
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS C:12 , HIS C:14 , GLU C:125 , ASP C:243 , PO4 C:303
BINDING SITE FOR RESIDUE ZN C 301
02
AC2
SOFTWARE
GLU C:125 , HIS C:158 , HIS C:186 , PO4 C:303
BINDING SITE FOR RESIDUE ZN C 302
03
AC3
SOFTWARE
HIS C:12 , HIS C:14 , TYR C:84 , GLU C:125 , HIS C:158 , HIS C:186 , ASP C:243 , THR C:245 , ZN C:301 , ZN C:302 , HOH C:511 , HOH C:518 , HOH C:532
BINDING SITE FOR RESIDUE PO4 C 303
04
AC4
SOFTWARE
LYS C:213 , TYR C:216 , THR C:245 , ARG C:246 , HOH C:511 , HOH C:532 , HOH C:635
BINDING SITE FOR RESIDUE PO4 C 304
05
AC5
SOFTWARE
ARG C:96 , HOH C:609
BINDING SITE FOR RESIDUE PO4 C 305
06
AC6
SOFTWARE
HIS D:12 , HIS D:14 , GLU D:125 , ASP D:243 , PO4 D:303
BINDING SITE FOR RESIDUE ZN D 301
07
AC7
SOFTWARE
GLU D:125 , HIS D:158 , HIS D:186 , PO4 D:303
BINDING SITE FOR RESIDUE ZN D 302
08
AC8
SOFTWARE
HIS D:12 , HIS D:14 , TYR D:84 , GLU D:125 , HIS D:158 , HIS D:186 , ASP D:243 , THR D:245 , ZN D:301 , ZN D:302 , PO4 D:304 , HOH D:465 , HOH D:557 , HOH D:559
BINDING SITE FOR RESIDUE PO4 D 303
09
AC9
SOFTWARE
LYS D:213 , TYR D:216 , THR D:245 , ARG D:246 , HIS D:249 , PO4 D:303 , HOH D:465 , HOH D:557 , HOH D:597
BINDING SITE FOR RESIDUE PO4 D 304
10
BC1
SOFTWARE
SER D:97 , ASP F:4 , ARG F:49 , HOH F:594
BINDING SITE FOR RESIDUE PO4 D 305
11
BC2
SOFTWARE
ARG D:57 , HOH D:555
BINDING SITE FOR RESIDUE PO4 D 306
12
BC3
SOFTWARE
HIS A:12 , HIS A:14 , GLU A:125 , ASP A:243 , PO4 A:303
BINDING SITE FOR RESIDUE ZN A 301
13
BC4
SOFTWARE
GLU A:125 , HIS A:158 , HIS A:186 , PO4 A:303
BINDING SITE FOR RESIDUE ZN A 302
14
BC5
SOFTWARE
HIS A:12 , HIS A:14 , TYR A:84 , GLU A:125 , HIS A:158 , HIS A:186 , ASP A:243 , ZN A:301 , ZN A:302 , HOH A:436 , HOH A:439 , HOH A:466
BINDING SITE FOR RESIDUE PO4 A 303
15
BC6
SOFTWARE
LYS A:213 , TYR A:216 , THR A:245 , ARG A:246 , HIS A:249 , HOH A:429 , HOH A:436 , HOH A:439 , HOH A:447
BINDING SITE FOR RESIDUE PO4 A 304
16
BC7
SOFTWARE
ARG A:57 , HOH A:682
BINDING SITE FOR RESIDUE PO4 A 305
17
BC8
SOFTWARE
ARG A:96 , HOH A:551 , HOH A:556
BINDING SITE FOR RESIDUE PO4 A 306
18
BC9
SOFTWARE
HIS B:12 , HIS B:14 , GLU B:125 , ASP B:243 , PO4 B:303
BINDING SITE FOR RESIDUE ZN B 301
19
CC1
SOFTWARE
GLU B:125 , HIS B:158 , HIS B:186 , PO4 B:303
BINDING SITE FOR RESIDUE ZN B 302
20
CC2
SOFTWARE
HIS B:12 , HIS B:14 , TYR B:84 , GLU B:125 , HIS B:158 , HIS B:186 , ASP B:243 , THR B:245 , ZN B:301 , ZN B:302 , HOH B:445 , HOH B:447 , HOH B:524
BINDING SITE FOR RESIDUE PO4 B 303
21
CC3
SOFTWARE
LYS B:213 , TYR B:216 , THR B:245 , ARG B:246 , HIS B:249 , HOH B:445 , HOH B:447 , HOH B:467
BINDING SITE FOR RESIDUE PO4 B 304
22
CC4
SOFTWARE
ARG B:57 , HOH B:526
BINDING SITE FOR RESIDUE PO4 B 305
23
CC5
SOFTWARE
ARG B:96 , HOH B:558
BINDING SITE FOR RESIDUE PO4 B 306
24
CC6
SOFTWARE
GLN B:38 , ASN B:41
BINDING SITE FOR RESIDUE PO4 B 307
25
CC7
SOFTWARE
HIS B:148 , ASN B:149 , GLY B:176 , ASP B:178 , ARG B:181 , HOH B:427 , HOH B:455 , HOH B:480 , HOH B:635 , TYR C:8 , ARG C:46 , GLY C:47 , GLN C:276 , ASP C:280 , ARG C:284 , HOH C:408
BINDING SITE FOR RESIDUE BGC B 308
26
CC8
SOFTWARE
HIS E:12 , HIS E:14 , GLU E:125 , ASP E:243 , PO4 E:303
BINDING SITE FOR RESIDUE ZN E 301
27
CC9
SOFTWARE
GLU E:125 , HIS E:158 , HIS E:186 , PO4 E:303
BINDING SITE FOR RESIDUE ZN E 302
28
DC1
SOFTWARE
HIS E:12 , HIS E:14 , TYR E:84 , GLU E:125 , HIS E:158 , HIS E:186 , ASP E:243 , ZN E:301 , ZN E:302 , PO4 E:304 , HOH E:456 , HOH E:467 , HOH E:480
BINDING SITE FOR RESIDUE PO4 E 303
29
DC2
SOFTWARE
LYS E:213 , TYR E:216 , THR E:245 , ARG E:246 , PO4 E:303 , HOH E:456 , HOH E:467 , HOH E:535
BINDING SITE FOR RESIDUE PO4 E 304
30
DC3
SOFTWARE
ALA A:34 , ASN A:41 , GLN E:268
BINDING SITE FOR RESIDUE PO4 E 305
31
DC4
SOFTWARE
ARG E:57 , HOH E:426
BINDING SITE FOR RESIDUE PO4 E 306
32
DC5
SOFTWARE
HIS F:12 , HIS F:14 , GLU F:125 , ASP F:243 , PO4 F:303
BINDING SITE FOR RESIDUE ZN F 301
33
DC6
SOFTWARE
GLU F:125 , HIS F:158 , HIS F:186 , PO4 F:303
BINDING SITE FOR RESIDUE ZN F 302
34
DC7
SOFTWARE
HIS F:12 , HIS F:14 , TYR F:84 , GLU F:125 , HIS F:158 , HIS F:186 , ASP F:243 , THR F:245 , ZN F:301 , ZN F:302 , HOH F:496 , HOH F:503 , HOH F:589
BINDING SITE FOR RESIDUE PO4 F 303
35
DC8
SOFTWARE
LYS F:213 , TYR F:216 , THR F:245 , ARG F:246 , HOH F:485 , HOH F:499 , HOH F:503 , HOH F:589
BINDING SITE FOR RESIDUE PO4 F 304
36
DC9
SOFTWARE
ARG F:57 , HOH F:490 , HOH F:598
BINDING SITE FOR RESIDUE PO4 F 305
37
EC1
SOFTWARE
ASN F:236 , ARG F:237
BINDING SITE FOR RESIDUE PO4 F 306
38
EC2
SOFTWARE
HIS G:12 , HIS G:14 , GLU G:125 , ASP G:243 , PO4 G:303
BINDING SITE FOR RESIDUE ZN G 301
39
EC3
SOFTWARE
GLU G:125 , HIS G:158 , HIS G:186 , PO4 G:303
BINDING SITE FOR RESIDUE ZN G 302
40
EC4
SOFTWARE
HIS G:12 , HIS G:14 , TYR G:84 , GLU G:125 , HIS G:158 , HIS G:186 , ASP G:243 , THR G:245 , ZN G:301 , ZN G:302 , HOH G:457 , HOH G:506 , HOH G:540
BINDING SITE FOR RESIDUE PO4 G 303
41
EC5
SOFTWARE
LYS G:213 , TYR G:216 , THR G:245 , ARG G:246 , HOH G:472 , HOH G:506 , HOH G:540
BINDING SITE FOR RESIDUE PO4 G 304
42
EC6
SOFTWARE
ARG G:96
BINDING SITE FOR RESIDUE PO4 G 305
43
EC7
SOFTWARE
LYS G:23 , ASN G:25 , ARG G:246
BINDING SITE FOR RESIDUE PO4 G 306
44
EC8
SOFTWARE
HIS H:12 , HIS H:14 , GLU H:125 , ASP H:243 , PO4 H:303
BINDING SITE FOR RESIDUE ZN H 301
45
EC9
SOFTWARE
GLU H:125 , HIS H:158 , HIS H:186 , PO4 H:303
BINDING SITE FOR RESIDUE ZN H 302
46
FC1
SOFTWARE
HIS H:12 , HIS H:14 , TYR H:84 , GLU H:125 , HIS H:158 , HIS H:186 , ASP H:243 , THR H:245 , ZN H:301 , ZN H:302 , PO4 H:304 , HOH H:445 , HOH H:489 , HOH H:505
BINDING SITE FOR RESIDUE PO4 H 303
47
FC2
SOFTWARE
LYS H:213 , TYR H:216 , THR H:245 , ARG H:246 , PO4 H:303 , HOH H:433 , HOH H:463 , HOH H:489
BINDING SITE FOR RESIDUE PO4 H 304
48
FC3
SOFTWARE
ASN H:25 , ARG H:246
BINDING SITE FOR RESIDUE PO4 H 305
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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[
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PROSITE Patterns/Profiles
(0, 0)
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[
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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