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4L37
Asym. Unit
Info
Asym.Unit (479 KB)
Biol.Unit 1, α-C (1.4 MB)
Biol.Unit 1 (1.4 MB)
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(1)
Title
:
SP2-SP3 - A COMPLEX OF TWO STORAGE PROTEINS FROM BOMBYX MORI HEMOLYMPH
Authors
:
A. J. Pietrzyk, A. Bujacz, J. Mueller-Dieckmann, M. Jaskolski, G. Buja
Date
:
05 Jun 13 (Deposition) - 04 Dec 13 (Release) - 24 Sep 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (3x)
Keywords
:
Arylphorin, Hemocyanin-Like Fold, Storage Proteins, Bmsp2, Bmsp3, Hemolymph, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. J. Pietrzyk, A. Bujacz, J. Mueller-Dieckmann, M. Ochynska, M. Jaskolski, G. Bujacz
Crystallographic Identification Of An Unexpected Protein Complex In Silkworm Haemolymph.
Acta Crystallogr. , Sect. D V. 69 2353 2013
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Hetero Components
(6, 20)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
2a: ALPHA-D-MANNOSE (MANa)
2b: ALPHA-D-MANNOSE (MANb)
2c: ALPHA-D-MANNOSE (MANc)
2d: ALPHA-D-MANNOSE (MANd)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3a: SODIUM ION (NAa)
3b: SODIUM ION (NAb)
3c: SODIUM ION (NAc)
5a: THIOCYANATE ION (SCNa)
5b: THIOCYANATE ION (SCNb)
5c: THIOCYANATE ION (SCNc)
5d: THIOCYANATE ION (SCNd)
5e: THIOCYANATE ION (SCNe)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BMA
2
Ligand/Ion
BETA-D-MANNOSE
2
MAN
4
Ligand/Ion
ALPHA-D-MANNOSE
3
NA
3
Ligand/Ion
SODIUM ION
4
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
SCN
5
Ligand/Ion
THIOCYANATE ION
6
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:190 , ASN A:192 , TYR A:666 , ASN A:669 , ILE A:670 , PRO A:671 , NAG A:702
BINDING SITE FOR RESIDUE NAG A 701
02
AC2
SOFTWARE
ILE A:670 , NAG A:701 , BMA A:703 , PRO B:524
BINDING SITE FOR RESIDUE NAG A 702
03
AC3
SOFTWARE
NAG A:702 , MAN A:704 , MAN A:705
BINDING SITE FOR RESIDUE BMA A 703
04
AC4
SOFTWARE
BMA A:703
BINDING SITE FOR RESIDUE MAN A 704
05
AC5
SOFTWARE
BMA A:703
BINDING SITE FOR RESIDUE MAN A 705
06
AC6
SOFTWARE
SER A:273 , TYR A:275 , HIS A:303 , TYR A:308 , ILE A:311 , ARG A:312
BINDING SITE FOR RESIDUE SO4 A 706
07
AC7
SOFTWARE
TYR A:257 , PRO A:406 , GLN A:410
BINDING SITE FOR RESIDUE NA A 707
08
AC8
SOFTWARE
PRO A:383 , PRO A:385 , PHE A:391 , ILE A:392
BINDING SITE FOR RESIDUE NA A 708
09
AC9
SOFTWARE
HIS A:223 , PHE A:228 , TYR A:250 , GLN A:353 , GLU A:372 , TYR A:399
BINDING SITE FOR RESIDUE SCN A 709
10
BC1
SOFTWARE
ASN A:582
BINDING SITE FOR RESIDUE SCN A 710
11
BC2
SOFTWARE
TYR A:144 , ARG A:484 , LYS A:558 , ASP A:560 , SER A:561
BINDING SITE FOR RESIDUE SCN A 711
12
BC3
SOFTWARE
PHE A:519 , GLU B:158 , LYS B:193 , ASN B:195 , ALA B:199 , TYR B:670 , ASN B:673 , NAG B:702
BINDING SITE FOR RESIDUE NAG B 701
13
BC4
SOFTWARE
PRO B:675 , NAG B:701 , BMA B:703
BINDING SITE FOR RESIDUE NAG B 702
14
BC5
SOFTWARE
NAG B:702 , MAN B:704 , MAN B:705
BINDING SITE FOR RESIDUE BMA B 703
15
BC6
SOFTWARE
PRO A:73 , BMA B:703
BINDING SITE FOR RESIDUE MAN B 704
16
BC7
SOFTWARE
LYS A:646 , BMA B:703
BINDING SITE FOR RESIDUE MAN B 705
17
BC8
SOFTWARE
SER B:276 , HIS B:306 , TYR B:311 , ARG B:315 , HOH B:828
BINDING SITE FOR RESIDUE SO4 B 706
18
BC9
SOFTWARE
PRO B:273 , GLN B:413 , ASN B:416 , HOH B:808
BINDING SITE FOR RESIDUE NA B 707
19
CC1
SOFTWARE
HIS B:226 , TYR B:253 , GLN B:356 , GLU B:375 , TYR B:402
BINDING SITE FOR RESIDUE SCN B 708
20
CC2
SOFTWARE
ASN B:195 , TYR B:196 , ALA B:199 , PRO B:669 , TYR B:670
BINDING SITE FOR RESIDUE SCN B 709
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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Asym.Unit (479 KB)
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