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4KTR
Asym. Unit
Info
Asym.Unit (1.0 MB)
Biol.Unit 1 (269 KB)
Biol.Unit 2 (273 KB)
Biol.Unit 3 (269 KB)
Biol.Unit 4 (267 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF 2-O-ALPHA-GLUCOSYLGLYCEROL PHOSPHORYLASE IN COMPLEX WITH ISOFAGOMINE AND GLYCEROL
Authors
:
K. K. Touhara, T. Nihira, M. Kitaoka, H. Nakai, S. Fushinobu
Date
:
21 May 13 (Deposition) - 21 May 14 (Release) - 12 Aug 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
(Alpha/Alpha)6 Barrel, Phosphorylase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. K. Touhara, T. Nihira, M. Kitaoka, H. Nakai, S. Fushinobu
Structural Basis For Reversible Phosphorolysis And Hydrolysis Reactions Of 2-O-Alpha-Glucosylglycerol Phosphorylase
J. Biol. Chem. V. 289 18067 2014
[
close entry info
]
Hetero Components
(10, 74)
Info
All Hetero Components
01a: PENTAETHYLENE GLYCOL (1PEa)
01b: PENTAETHYLENE GLYCOL (1PEb)
01c: PENTAETHYLENE GLYCOL (1PEc)
02a: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHO... (7PEa)
02b: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHO... (7PEb)
03a: CALCIUM ION (CAa)
03b: CALCIUM ION (CAb)
03c: CALCIUM ION (CAc)
03d: CALCIUM ION (CAd)
03e: CALCIUM ION (CAe)
03f: CALCIUM ION (CAf)
03g: CALCIUM ION (CAg)
04a: GLYCEROL (GOLa)
04aa: GLYCEROL (GOLaa)
04ab: GLYCEROL (GOLab)
04ac: GLYCEROL (GOLac)
04ad: GLYCEROL (GOLad)
04ae: GLYCEROL (GOLae)
04af: GLYCEROL (GOLaf)
04ag: GLYCEROL (GOLag)
04ah: GLYCEROL (GOLah)
04ai: GLYCEROL (GOLai)
04aj: GLYCEROL (GOLaj)
04ak: GLYCEROL (GOLak)
04al: GLYCEROL (GOLal)
04am: GLYCEROL (GOLam)
04an: GLYCEROL (GOLan)
04ao: GLYCEROL (GOLao)
04ap: GLYCEROL (GOLap)
04aq: GLYCEROL (GOLaq)
04ar: GLYCEROL (GOLar)
04b: GLYCEROL (GOLb)
04c: GLYCEROL (GOLc)
04d: GLYCEROL (GOLd)
04e: GLYCEROL (GOLe)
04f: GLYCEROL (GOLf)
04g: GLYCEROL (GOLg)
04h: GLYCEROL (GOLh)
04i: GLYCEROL (GOLi)
04j: GLYCEROL (GOLj)
04k: GLYCEROL (GOLk)
04l: GLYCEROL (GOLl)
04m: GLYCEROL (GOLm)
04n: GLYCEROL (GOLn)
04o: GLYCEROL (GOLo)
04p: GLYCEROL (GOLp)
04q: GLYCEROL (GOLq)
04r: GLYCEROL (GOLr)
04s: GLYCEROL (GOLs)
04t: GLYCEROL (GOLt)
04u: GLYCEROL (GOLu)
04v: GLYCEROL (GOLv)
04w: GLYCEROL (GOLw)
04x: GLYCEROL (GOLx)
04y: GLYCEROL (GOLy)
04z: GLYCEROL (GOLz)
05a: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPER... (IFMa)
05b: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPER... (IFMb)
05c: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPER... (IFMc)
05d: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPER... (IFMd)
05e: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPER... (IFMe)
05f: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPER... (IFMf)
06a: HEXAETHYLENE GLYCOL (P6Ga)
06b: HEXAETHYLENE GLYCOL (P6Gb)
07a: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)... (PE4a)
08a: 3,6,9,12,15,18,21,24-OCTAOXAHEXACO... (PE5a)
09a: TETRAETHYLENE GLYCOL (PG4a)
09b: TETRAETHYLENE GLYCOL (PG4b)
09c: TETRAETHYLENE GLYCOL (PG4c)
09d: TETRAETHYLENE GLYCOL (PG4d)
10a: TRIETHYLENE GLYCOL (PGEa)
10b: TRIETHYLENE GLYCOL (PGEb)
10c: TRIETHYLENE GLYCOL (PGEc)
10d: TRIETHYLENE GLYCOL (PGEd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
3
Ligand/Ion
PENTAETHYLENE GLYCOL
2
7PE
2
Ligand/Ion
2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL
3
CA
7
Ligand/Ion
CALCIUM ION
4
GOL
44
Ligand/Ion
GLYCEROL
5
IFM
6
Ligand/Ion
5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE
6
P6G
2
Ligand/Ion
HEXAETHYLENE GLYCOL
7
PE4
1
Ligand/Ion
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
8
PE5
1
Ligand/Ion
3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
9
PG4
4
Ligand/Ion
TETRAETHYLENE GLYCOL
10
PGE
4
Ligand/Ion
TRIETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(74, 74)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
70: HC7 (SOFTWARE)
71: HC8 (SOFTWARE)
72: HC9 (SOFTWARE)
73: IC1 (SOFTWARE)
74: IC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:327 , PHE A:332 , TRP A:333 , ASP A:334 , GLN A:475 , GLN A:588 , LEU A:624 , HOH A:917 , HOH A:931 , HOH A:962
BINDING SITE FOR RESIDUE IFM A 801
02
AC2
SOFTWARE
LYS A:65 , GLY A:68 , LYS A:69 , ARG A:371 , GLU A:389 , CYS A:391
BINDING SITE FOR RESIDUE 1PE A 802
03
AC3
SOFTWARE
ARG A:320 , SER A:623 , ASN A:658 , ILE A:667 , HIS A:671 , HOH A:962 , HOH A:1049
BINDING SITE FOR RESIDUE GOL A 803
04
AC4
SOFTWARE
PRO A:310 , LYS A:313 , LEU A:315 , ASN A:353 , ILE A:354
BINDING SITE FOR RESIDUE GOL A 804
05
AC5
SOFTWARE
LYS A:605 , GLU A:608 , GLU A:612 , ASP F:209
BINDING SITE FOR RESIDUE GOL A 805
06
AC6
SOFTWARE
GLU A:336 , MET A:340 , PRO A:341 , TYR A:422 , VAL A:596 , PRO A:599 , ILE A:631 , GLN A:635 , GLN A:680 , ASN A:684 , LEU A:689
BINDING SITE FOR RESIDUE P6G A 806
07
AC7
SOFTWARE
ASP A:152 , GLU C:640 , ASP C:704
BINDING SITE FOR RESIDUE GOL A 807
08
AC8
SOFTWARE
TRP A:14 , SER A:107 , ARG A:274 , ASP A:278
BINDING SITE FOR RESIDUE GOL A 808
09
AC9
SOFTWARE
TYR A:163 , ASP A:164 , ASP A:219
BINDING SITE FOR RESIDUE GOL A 809
10
BC1
SOFTWARE
TRP A:70 , ASN A:169 , ALA A:326 , TYR A:327 , GLN A:328 , PHE A:395 , PHE A:666 , HOH A:929 , HOH A:939
BINDING SITE FOR RESIDUE GOL A 810
11
BC2
SOFTWARE
THR A:555 , ILE A:557 , LYS A:561 , HOH A:1073 , ASP F:158 , TYR F:215
BINDING SITE FOR RESIDUE GOL A 811
12
BC3
SOFTWARE
LEU A:81 , LEU A:83 , ASP A:158 , ILE A:161 , TYR A:215 , ASN A:217 , GLY A:220 , SER A:221
BINDING SITE FOR RESIDUE PGE A 812
13
BC4
SOFTWARE
GLU A:615 , HOH A:938 , HOH A:1081 , ASP F:154 , HOH F:1078 , HOH F:1147
BINDING SITE FOR RESIDUE CA A 813
14
BC5
SOFTWARE
LYS B:65 , GLY B:68 , LYS B:69 , ARG B:371 , GLU B:389 , CYS B:391 , HOH B:976 , HOH B:1130
BINDING SITE FOR RESIDUE PG4 B 801
15
BC6
SOFTWARE
GLU B:336 , MET B:340 , LEU B:344 , TYR B:422 , VAL B:596 , PRO B:599 , ARG B:604 , GLN B:635 , GLN B:680 , ASN B:684 , HOH B:1039 , HOH B:1106
BINDING SITE FOR RESIDUE 7PE B 802
16
BC7
SOFTWARE
PRO B:310 , LYS B:313 , LEU B:315 , ILE B:354
BINDING SITE FOR RESIDUE GOL B 803
17
BC8
SOFTWARE
TRP B:70 , ASN B:169 , ALA B:326 , TYR B:327 , GLN B:328 , PHE B:395 , PHE B:666 , HOH B:980 , HOH B:989
BINDING SITE FOR RESIDUE GOL B 804
18
BC9
SOFTWARE
ASN B:347 , HOH B:1032
BINDING SITE FOR RESIDUE GOL B 805
19
CC1
SOFTWARE
HIS B:488 , MET B:491 , PHE B:492 , HOH B:1068
BINDING SITE FOR RESIDUE GOL B 806
20
CC2
SOFTWARE
ASN B:479 , LEU B:553 , VAL B:581
BINDING SITE FOR RESIDUE GOL B 807
21
CC3
SOFTWARE
ALA B:319 , TYR B:327 , PHE B:332 , TRP B:333 , ASP B:334 , HOH B:1137
BINDING SITE FOR RESIDUE GOL B 808
22
CC4
SOFTWARE
GLU B:615 , HOH B:1107 , HOH B:1202 , ASP D:154 , HOH D:1055 , HOH D:1166
BINDING SITE FOR RESIDUE CA B 809
23
CC5
SOFTWARE
LYS C:65 , LYS C:69 , ARG C:371 , GLU C:389 , CYS C:391
BINDING SITE FOR RESIDUE 1PE C 801
24
CC6
SOFTWARE
ARG C:366 , GLU C:375 , GLY C:376 , GLU C:447 , ARG C:450 , HOH C:989
BINDING SITE FOR RESIDUE GOL C 802
25
CC7
SOFTWARE
ASP A:158 , TYR A:215 , THR C:555 , ILE C:557 , LYS C:561
BINDING SITE FOR RESIDUE GOL C 803
26
CC8
SOFTWARE
PHE C:332 , TRP C:333 , ASP C:334 , HOH C:1028 , HOH C:1100 , HOH C:1152
BINDING SITE FOR RESIDUE GOL C 804
27
CC9
SOFTWARE
GLU C:336 , LEU C:344 , TYR C:345 , TYR C:422 , VAL C:596 , PRO C:599 , GLN C:635 , GLN C:680 , ASN C:684 , VAL C:691 , HOH C:1150
BINDING SITE FOR RESIDUE PE4 C 805
28
DC1
SOFTWARE
GLY C:175 , LYS C:190
BINDING SITE FOR RESIDUE GOL C 806
29
DC2
SOFTWARE
GLU B:721 , ASP B:723 , ARG B:756 , GLU C:721 , ARG C:756
BINDING SITE FOR RESIDUE PGE C 807
30
DC3
SOFTWARE
TRP C:70 , ASN C:169 , ALA C:326 , TYR C:327 , GLN C:328 , PHE C:395 , THR C:665 , PHE C:666 , HOH C:997 , HOH C:1008
BINDING SITE FOR RESIDUE GOL C 808
31
DC4
SOFTWARE
PRO C:310 , LYS C:313 , LEU C:315 , ILE C:350 , ASN C:353 , ILE C:354 , HOH C:1169
BINDING SITE FOR RESIDUE GOL C 809
32
DC5
SOFTWARE
ASP A:154 , HOH A:979 , HOH A:1076 , GLU C:615 , HOH C:973 , HOH C:1148
BINDING SITE FOR RESIDUE CA C 810
33
DC6
SOFTWARE
ALA D:319 , PHE D:332 , TRP D:333 , ASP D:334 , GLN D:475 , GLN D:588 , LEU D:624 , GOL D:802 , HOH D:1015 , HOH D:1243
BINDING SITE FOR RESIDUE IFM D 801
34
DC7
SOFTWARE
TYR D:327 , TRP D:381 , PHE D:396 , GLN D:475 , IFM D:801 , HOH D:986 , HOH D:1185
BINDING SITE FOR RESIDUE GOL D 802
35
DC8
SOFTWARE
LYS D:65 , GLY D:68 , LYS D:69 , ARG D:371 , GLU D:389 , CYS D:391 , PRO D:392
BINDING SITE FOR RESIDUE PG4 D 803
36
DC9
SOFTWARE
ARG D:366 , GLU D:375 , GLY D:376 , GLU D:447 , ARG D:450 , HOH D:1069
BINDING SITE FOR RESIDUE GOL D 804
37
EC1
SOFTWARE
ASP B:704 , ASP D:152 , ALA D:231
BINDING SITE FOR RESIDUE GOL D 805
38
EC2
SOFTWARE
PRO D:182 , GLU D:212 , HOH D:1192 , HOH D:1202
BINDING SITE FOR RESIDUE GOL D 806
39
EC3
SOFTWARE
ASP D:539 , HIS D:541 , ILE D:543 , TYR D:551 , HOH D:1216 , GOL H:806
BINDING SITE FOR RESIDUE GOL D 807
40
EC4
SOFTWARE
GLU D:336 , MET D:340 , PRO D:341 , LEU D:344 , TYR D:422 , VAL D:596 , PRO D:599 , GLN D:635 , GLN D:680 , ASN D:684 , LEU D:689
BINDING SITE FOR RESIDUE 7PE D 808
41
EC5
SOFTWARE
LYS C:459 , TYR D:374 , HIS D:455 , VAL D:457 , MET D:468 , HOH D:1009 , HOH D:1052
BINDING SITE FOR RESIDUE GOL D 809
42
EC6
SOFTWARE
TRP D:70 , ASN D:169 , ALA D:326 , TYR D:327 , GLN D:328 , PHE D:395 , PHE D:666 , HOH D:958 , HOH D:976
BINDING SITE FOR RESIDUE GOL D 810
43
EC7
SOFTWARE
ARG D:366 , ARG D:367
BINDING SITE FOR RESIDUE GOL D 811
44
EC8
SOFTWARE
PRO D:310 , LYS D:313 , LEU D:315 , ILE D:350 , ILE D:354 , HOH D:1114
BINDING SITE FOR RESIDUE GOL D 812
45
EC9
SOFTWARE
GLU D:213 , ASP D:214 , HOH D:1176 , HOH D:1232 , HOH D:1247 , HOH D:1248
BINDING SITE FOR RESIDUE CA D 813
46
FC1
SOFTWARE
GLU D:615 , HOH D:1047 , HOH D:1067 , HOH D:1118 , ASP H:154
BINDING SITE FOR RESIDUE CA D 814
47
FC2
SOFTWARE
TYR E:327 , PHE E:332 , TRP E:333 , ASP E:334 , GLN E:475 , GLN E:588 , HOH E:1038
BINDING SITE FOR RESIDUE IFM E 801
48
FC3
SOFTWARE
LYS E:65 , GLY E:68 , ARG E:371 , CYS E:391 , HOH E:1006
BINDING SITE FOR RESIDUE 1PE E 802
49
FC4
SOFTWARE
GLU E:336 , PRO E:341 , TYR E:422 , VAL E:596 , PRO E:599 , ILE E:631 , GLN E:635 , GLN E:680 , ASN E:684 , LEU E:689
BINDING SITE FOR RESIDUE P6G E 803
50
FC5
SOFTWARE
ARG E:366 , GLU E:375 , GLY E:376 , GLU E:447 , ARG E:450 , ILE E:516 , HOH E:950
BINDING SITE FOR RESIDUE GOL E 804
51
FC6
SOFTWARE
ASP E:398 , TYR E:572 , PRO E:576 , ASN E:577 , GLY E:578 , ARG F:403 , HOH F:958
BINDING SITE FOR RESIDUE GOL E 805
52
FC7
SOFTWARE
TRP E:70 , ASN E:169 , ALA E:326 , TYR E:327 , GLN E:328 , PHE E:395 , PHE E:666 , HOH E:963 , HOH E:969
BINDING SITE FOR RESIDUE GOL E 806
53
FC8
SOFTWARE
PRO E:310 , LYS E:313 , LEU E:315 , GLN E:335 , ASN E:353 , ILE E:354
BINDING SITE FOR RESIDUE GOL E 807
54
FC9
SOFTWARE
ASP B:154 , HOH B:1203 , GLU E:615 , HOH E:1002 , HOH E:1070 , HOH E:1082
BINDING SITE FOR RESIDUE CA E 808
55
GC1
SOFTWARE
TYR F:327 , PHE F:332 , TRP F:333 , ASP F:334 , GLN F:475 , GLN F:588 , LEU F:624 , GOL F:802 , HOH F:961 , HOH F:1082
BINDING SITE FOR RESIDUE IFM F 801
56
GC2
SOFTWARE
TYR F:327 , TRP F:381 , PHE F:396 , PHE F:409 , GLN F:475 , IFM F:801
BINDING SITE FOR RESIDUE GOL F 802
57
GC3
SOFTWARE
LYS F:65 , GLY F:68 , LYS F:69 , ARG F:371 , GLU F:389 , CYS F:391 , PRO F:392 , ASP F:393
BINDING SITE FOR RESIDUE PG4 F 803
58
GC4
SOFTWARE
PRO F:310 , LYS F:313 , LEU F:315 , ASN F:353 , ILE F:354 , HOH F:1033
BINDING SITE FOR RESIDUE GOL F 804
59
GC5
SOFTWARE
GLU F:213 , ASP F:214 , HOH F:1046
BINDING SITE FOR RESIDUE GOL F 805
60
GC6
SOFTWARE
GLU F:336 , MET F:340 , PRO F:341 , LEU F:344 , TYR F:422 , VAL F:596 , GLN F:680 , ASN F:684 , HOH F:1003
BINDING SITE FOR RESIDUE PGE F 806
61
GC7
SOFTWARE
ALA G:319 , TYR G:327 , PHE G:332 , TRP G:333 , ASP G:334 , GLN G:475 , GLN G:588 , GOL G:802 , HOH G:1096
BINDING SITE FOR RESIDUE IFM G 801
62
GC8
SOFTWARE
TYR G:327 , TRP G:381 , PHE G:395 , PHE G:396 , GLN G:475 , IFM G:801 , HOH G:964
BINDING SITE FOR RESIDUE GOL G 802
63
GC9
SOFTWARE
ASP C:209 , ALA C:210 , LYS G:605 , GLU G:608 , GLU G:612
BINDING SITE FOR RESIDUE GOL G 803
64
HC1
SOFTWARE
TYR G:374 , HIS G:455 , MET G:468 , LYS H:459
BINDING SITE FOR RESIDUE GOL G 804
65
HC2
SOFTWARE
LYS G:65 , GLY G:68 , GLU G:389 , CYS G:391
BINDING SITE FOR RESIDUE PGE G 805
66
HC3
SOFTWARE
ASP C:154 , HOH C:1186 , GLU G:615 , HOH G:995 , HOH G:1097
BINDING SITE FOR RESIDUE CA G 806
67
HC4
SOFTWARE
ALA H:319 , PHE H:332 , TRP H:333 , ASP H:334 , GLN H:475 , GLN H:588 , LEU H:624 , GOL H:802 , HOH H:932 , HOH H:985
BINDING SITE FOR RESIDUE IFM H 801
68
HC5
SOFTWARE
TYR H:327 , TRP H:381 , PHE H:395 , PHE H:396 , PHE H:409 , GLN H:475 , LYS H:587 , IFM H:801 , HOH H:958 , HOH H:1094
BINDING SITE FOR RESIDUE GOL H 802
69
HC6
SOFTWARE
LYS H:65 , GLY H:68 , LYS H:69 , ARG H:371 , GLU H:389 , CYS H:391 , ASP H:393
BINDING SITE FOR RESIDUE PG4 H 803
70
HC7
SOFTWARE
TRP H:70 , ASN H:169 , ALA H:326 , TYR H:327 , GLN H:328 , PHE H:666 , HOH H:986 , HOH H:1032
BINDING SITE FOR RESIDUE GOL H 804
71
HC8
SOFTWARE
PRO H:310 , LYS H:313 , SER H:314 , LEU H:315 , ILE H:350 , ASN H:353 , ILE H:354 , HOH H:983
BINDING SITE FOR RESIDUE GOL H 805
72
HC9
SOFTWARE
GOL D:807 , GLU H:213 , ASP H:214 , HOH H:1098
BINDING SITE FOR RESIDUE GOL H 806
73
IC1
SOFTWARE
ASP H:164 , ASP H:219
BINDING SITE FOR RESIDUE GOL H 807
74
IC2
SOFTWARE
GLU H:336 , PRO H:341 , LEU H:344 , TYR H:345 , TYR H:422 , LYS H:426 , VAL H:596 , LEU H:597 , PRO H:599 , ILE H:631 , GLN H:635 , ASN H:684 , LEU H:689 , VAL H:691
BINDING SITE FOR RESIDUE PE5 H 808
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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Atom Selection
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Asymmetric Unit 1
Rendering
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Molecule Coloring
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by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
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Miscellaneous
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Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
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Asym.Unit (1.0 MB)
Header - Asym.Unit
Biol.Unit 1 (269 KB)
Header - Biol.Unit 1
Biol.Unit 2 (273 KB)
Header - Biol.Unit 2
Biol.Unit 3 (269 KB)
Header - Biol.Unit 3
Biol.Unit 4 (267 KB)
Header - Biol.Unit 4
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