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4KF1
Biol. Unit 2
Info
Asym.Unit (441 KB)
Biol.Unit 1 (218 KB)
Biol.Unit 2 (219 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SSOPOX W263I IN COMPLEX WITH C10HTL
Authors
:
G. Gotthard, J. Hiblot, E. Chabriere, M. Elias
Date
:
26 Apr 13 (Deposition) - 02 Oct 13 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
(Beta/Alpha)8-Hydrolase, Lactonase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hiblot, G. Gotthard, M. Elias, E. Chabriere
Differential Active Site Loop Conformations Mediate Promiscuous Activities In The Lactonase Ssopox.
Plos One V. 8 75272 2013
[
close entry info
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Hetero Components
(6, 19)
Info
All Hetero Components
1a: COBALT (II) ION (COa)
1b: COBALT (II) ION (COb)
1c: COBALT (II) ION (COc)
1d: COBALT (II) ION (COd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
3a: FE (II) ION (FE2a)
3b: FE (II) ION (FE2b)
3c: FE (II) ION (FE2c)
3d: FE (II) ION (FE2d)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
4h: GLYCEROL (GOLh)
4i: GLYCEROL (GOLi)
4j: GLYCEROL (GOLj)
4k: GLYCEROL (GOLk)
4l: GLYCEROL (GOLl)
4m: GLYCEROL (GOLm)
4n: GLYCEROL (GOLn)
4o: GLYCEROL (GOLo)
4p: GLYCEROL (GOLp)
4q: GLYCEROL (GOLq)
4r: GLYCEROL (GOLr)
5a: (4S)-4-(DECANOYLAMINO)-5-HYDROXY-3... (HT5a)
5b: (4S)-4-(DECANOYLAMINO)-5-HYDROXY-3... (HT5b)
5c: (4S)-4-(DECANOYLAMINO)-5-HYDROXY-3... (HT5c)
5d: (4S)-4-(DECANOYLAMINO)-5-HYDROXY-3... (HT5d)
6a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
6b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
6c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
6d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
7c: TETRAETHYLENE GLYCOL (PG4c)
7d: TETRAETHYLENE GLYCOL (PG4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CO
-1
Ligand/Ion
COBALT (II) ION
2
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
3
FE2
2
Ligand/Ion
FE (II) ION
4
GOL
7
Ligand/Ion
GLYCEROL
5
HT5
2
Ligand/Ion
(4S)-4-(DECANOYLAMINO)-5-HYDROXY-3,4-DIHYDRO-2H-THIOPHENIUM
6
KCX
2
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
7
PG4
2
Ligand/Ion
TETRAETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(23, 23)
Info
All Sites
01: AC9 (SOFTWARE)
02: BC5 (SOFTWARE)
03: BC6 (SOFTWARE)
04: BC7 (SOFTWARE)
05: BC8 (SOFTWARE)
06: BC9 (SOFTWARE)
07: CC1 (SOFTWARE)
08: CC2 (SOFTWARE)
09: CC3 (SOFTWARE)
10: CC4 (SOFTWARE)
11: CC5 (SOFTWARE)
12: CC6 (SOFTWARE)
13: DC8 (SOFTWARE)
14: DC9 (SOFTWARE)
15: EC1 (SOFTWARE)
16: EC2 (SOFTWARE)
17: EC3 (SOFTWARE)
18: EC4 (SOFTWARE)
19: EC5 (SOFTWARE)
20: EC6 (SOFTWARE)
21: EC7 (SOFTWARE)
22: EC8 (SOFTWARE)
23: EC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC9
SOFTWARE
PHE A:18 , LYS A:292 , GLU A:298 , GOL A:415 , HOH A:627 , GLN B:58
BINDING SITE FOR RESIDUE EDO A 409
02
BC5
SOFTWARE
THR A:186 , VAL A:190 , PRO A:192 , HOH A:752 , MET D:1 , SER D:10 , HOH D:658
BINDING SITE FOR RESIDUE EDO A 414
03
BC6
SOFTWARE
PHE A:59 , PHE A:284 , ILE A:288 , PRO A:289 , LYS A:292 , EDO A:409 , HOH A:595 , ARG B:55 , GLN B:58 , PHE B:59
BINDING SITE FOR RESIDUE GOL A 415
04
BC7
SOFTWARE
ARG A:55 , GLN A:58 , HOH A:747 , PHE B:18 , ILE B:288 , GLU B:298
BINDING SITE FOR RESIDUE GOL A 416
05
BC8
SOFTWARE
KCX B:137 , HIS B:170 , HIS B:199 , ARG B:223 , FE2 B:402 , HT5 B:403 , HOH B:786
BINDING SITE FOR RESIDUE CO B 401
06
BC9
SOFTWARE
HIS B:22 , HIS B:24 , KCX B:137 , ASP B:256 , CO B:401 , HT5 B:403 , HOH B:786
BINDING SITE FOR RESIDUE FE2 B 402
07
CC1
SOFTWARE
HIS B:24 , TYR B:97 , TYR B:99 , KCX B:137 , HIS B:170 , ARG B:223 , ASP B:256 , CYS B:258 , THR B:265 , LYS B:271 , ALA B:275 , CO B:401 , FE2 B:402 , HOH B:676 , HOH B:744 , HOH B:786
BINDING SITE FOR RESIDUE HT5 B 403
08
CC2
SOFTWARE
TYR B:97 , TYR B:99 , LEU D:107 , ASN D:108
BINDING SITE FOR RESIDUE PG4 B 404
09
CC3
SOFTWARE
ASN B:160 , LYS B:164 , GLY B:189 , ASP B:191 , LYS B:194 , HOH B:602 , HOH B:757
BINDING SITE FOR RESIDUE GOL B 405
10
CC4
SOFTWARE
PRO B:4 , LEU B:5 , LYS B:8 , ASP B:9 , SER B:10 , LEU B:130 , ASN B:131 , LYS B:132 , HOH B:616
BINDING SITE FOR RESIDUE EDO B 406
11
CC5
SOFTWARE
HIS B:120 , GLU B:124 , GLY B:125 , GLN B:127 , GLY B:128 , THR B:129 , HOH B:590 , HOH B:619
BINDING SITE FOR RESIDUE EDO B 407
12
CC6
SOFTWARE
ASN B:172 , ALA B:173 , HIS B:174 , ASP B:202 , PHE B:229 , HOH B:544
BINDING SITE FOR RESIDUE GOL B 408
13
DC8
SOFTWARE
KCX D:137 , HIS D:170 , HIS D:199 , ARG D:223 , FE2 D:402 , HT5 D:403 , HOH D:732
BINDING SITE FOR RESIDUE CO D 401
14
DC9
SOFTWARE
HIS D:22 , HIS D:24 , KCX D:137 , ASP D:256 , CO D:401 , HT5 D:403 , HOH D:732
BINDING SITE FOR RESIDUE FE2 D 402
15
EC1
SOFTWARE
HIS D:24 , TYR D:97 , TYR D:99 , KCX D:137 , HIS D:170 , ARG D:223 , ASP D:256 , CYS D:258 , ALA D:266 , LYS D:271 , ALA D:275 , CO D:401 , FE2 D:402 , PG4 D:404 , HOH D:558 , HOH D:718 , HOH D:719 , HOH D:727 , HOH D:732
BINDING SITE FOR RESIDUE HT5 D 403
16
EC2
SOFTWARE
PHE B:104 , LEU B:107 , ASN B:108 , TYR D:99 , HT5 D:403 , HOH D:667
BINDING SITE FOR RESIDUE PG4 D 404
17
EC3
SOFTWARE
GLY C:295 , ASN C:297 , VAL C:300 , GLU D:12 , ASP D:15
BINDING SITE FOR RESIDUE GOL D 405
18
EC4
SOFTWARE
ASN D:160 , LYS D:164 , GLY D:189 , ASP D:191 , LYS D:194
BINDING SITE FOR RESIDUE GOL D 406
19
EC5
SOFTWARE
PHE B:104 , ILE D:98 , TYR D:99 , ILE D:100 , ASP D:101 , HOH D:532 , HOH D:589 , HOH D:652
BINDING SITE FOR RESIDUE GOL D 407
20
EC6
SOFTWARE
TYR D:247 , ASP D:249 , LYS D:250
BINDING SITE FOR RESIDUE EDO D 408
21
EC7
SOFTWARE
ASN D:172 , ALA D:173 , HIS D:174 , ASP D:202 , PHE D:229 , HOH D:591 , HOH D:708
BINDING SITE FOR RESIDUE GOL D 409
22
EC8
SOFTWARE
ARG D:33 , PRO D:37 , TYR D:40 , HOH D:595
BINDING SITE FOR RESIDUE EDO D 410
23
EC9
SOFTWARE
GLU A:187 , LEU D:5 , GLY D:7 , LYS D:8 , LEU D:130 , ASN D:131 , HOH D:514 , HOH D:542 , HOH D:705 , HOH D:706 , HOH D:729
BINDING SITE FOR RESIDUE GOL D 411
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4kf1a_ (A:)
1b: SCOP_d4kf1c_ (C:)
1c: SCOP_d4kf1d_ (D:)
1d: SCOP_d4kf1b_ (B:)
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Metallo-dependent hydrolases
(273)
Family
:
automated matches
(44)
Protein domain
:
automated matches
(44)
Sulfolobus solfataricus [TaxId: 2287]
(10)
1a
d4kf1a_
A:
1b
d4kf1c_
C:
1c
d4kf1d_
D:
1d
d4kf1b_
B:
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
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Sorry, no Info available
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Protein & NOT Site
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Chain B
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Asymmetric Unit 1
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