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4KEU
Asym. Unit
Info
Asym.Unit (431 KB)
Biol.Unit 1 (213 KB)
Biol.Unit 2 (215 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SSOPOX W263M
Authors
:
G. Gotthard, J. Hiblot, E. Chabriere, M. Elias
Date
:
26 Apr 13 (Deposition) - 02 Oct 13 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
(Beta/Alpha)8-Hydrolase, Lactonase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hiblot, G. Gotthard, M. Elias, E. Chabriere
Differential Active Site Loop Conformations Mediate Promiscuous Activities In The Lactonase Ssopox.
Plos One V. 8 75272 2013
[
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Hetero Components
(5, 23)
Info
All Hetero Components
1a: COBALT (II) ION (COa)
1b: COBALT (II) ION (COb)
1c: COBALT (II) ION (COc)
1d: COBALT (II) ION (COd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
3a: FE (II) ION (FE2a)
3b: FE (II) ION (FE2b)
3c: FE (II) ION (FE2c)
3d: FE (II) ION (FE2d)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
5a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
5b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
5c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
5d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CO
4
Ligand/Ion
COBALT (II) ION
2
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
3
FE2
4
Ligand/Ion
FE (II) ION
4
GOL
6
Ligand/Ion
GLYCEROL
5
KCX
4
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
[
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Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:22 , HIS A:24 , KCX A:137 , ASP A:256 , CO A:402 , HOH A:580
BINDING SITE FOR RESIDUE FE2 A 401
02
AC2
SOFTWARE
KCX A:137 , HIS A:170 , HIS A:199 , FE2 A:401 , HOH A:580
BINDING SITE FOR RESIDUE CO A 402
03
AC3
SOFTWARE
SER A:171 , ASN A:172 , ALA A:173 , HIS A:199 , ASP A:202 , PHE A:229 , HOH A:530
BINDING SITE FOR RESIDUE EDO A 403
04
AC4
SOFTWARE
ILE A:98 , TYR A:99 , ILE A:100 , ASP A:101 , HOH A:560 , PHE C:104
BINDING SITE FOR RESIDUE EDO A 404
05
AC5
SOFTWARE
ASN A:160 , LYS A:164 , GLY A:189 , ASP A:191 , LYS A:194
BINDING SITE FOR RESIDUE GOL A 405
06
AC6
SOFTWARE
HIS A:120 , GLY A:125 , GLY A:128 , THR A:129 , HOH A:539 , HOH A:584
BINDING SITE FOR RESIDUE GOL A 406
07
AC7
SOFTWARE
PHE B:59
BINDING SITE FOR RESIDUE EDO B 401
08
AC8
SOFTWARE
HIS B:22 , HIS B:24 , KCX B:137 , ASP B:256 , CO B:403 , HOH B:582
BINDING SITE FOR RESIDUE FE2 B 402
09
AC9
SOFTWARE
KCX B:137 , HIS B:170 , HIS B:199 , FE2 B:402 , HOH B:582
BINDING SITE FOR RESIDUE CO B 403
10
BC1
SOFTWARE
ASN B:160 , LYS B:164 , GLY B:189 , VAL B:190 , ASP B:191 , LYS B:194 , HOH B:574
BINDING SITE FOR RESIDUE GOL B 404
11
BC2
SOFTWARE
HIS C:22 , HIS C:24 , KCX C:137 , ASP C:256 , CO C:402 , HOH C:573
BINDING SITE FOR RESIDUE FE2 C 401
12
BC3
SOFTWARE
KCX C:137 , HIS C:170 , HIS C:199 , ARG C:223 , FE2 C:401 , HOH C:573
BINDING SITE FOR RESIDUE CO C 402
13
BC4
SOFTWARE
ASN C:160 , LYS C:164 , ASP C:191
BINDING SITE FOR RESIDUE GOL C 403
14
BC5
SOFTWARE
HIS D:22 , HIS D:24 , KCX D:137 , ASP D:256 , CO D:402 , HOH D:581
BINDING SITE FOR RESIDUE FE2 D 401
15
BC6
SOFTWARE
KCX D:137 , HIS D:170 , HIS D:199 , FE2 D:401 , HOH D:581
BINDING SITE FOR RESIDUE CO D 402
16
BC7
SOFTWARE
ASN D:172 , ALA D:173 , HIS D:174 , ASP D:202 , PHE D:229 , HOH D:528
BINDING SITE FOR RESIDUE EDO D 403
17
BC8
SOFTWARE
PHE B:104 , ILE D:98 , TYR D:99 , ILE D:100 , ASP D:101 , HOH D:553
BINDING SITE FOR RESIDUE EDO D 404
18
BC9
SOFTWARE
ASN D:160 , LYS D:164 , GLY D:189 , VAL D:190 , ASP D:191 , HOH D:545
BINDING SITE FOR RESIDUE GOL D 405
19
CC1
SOFTWARE
HIS D:120 , GLU D:124 , GLY D:128 , THR D:129
BINDING SITE FOR RESIDUE GOL D 406
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4keua_ (A:)
1b: SCOP_d4keub_ (B:)
1c: SCOP_d4keuc_ (C:)
1d: SCOP_d4keud_ (D:)
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Protein Domains
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Organisms
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Metallo-dependent hydrolases
(273)
Family
:
automated matches
(44)
Protein domain
:
automated matches
(44)
Sulfolobus solfataricus [TaxId: 2287]
(10)
1a
d4keua_
A:
1b
d4keub_
B:
1c
d4keuc_
C:
1d
d4keud_
D:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Sorry, no Info available
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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show SS bonds with a radius of 100 units (=0.4Å)
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Show PDB file:
Asym.Unit (431 KB)
Header - Asym.Unit
Biol.Unit 1 (213 KB)
Header - Biol.Unit 1
Biol.Unit 2 (215 KB)
Header - Biol.Unit 2
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