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4KES
Biol. Unit 2
Info
Asym.Unit (447 KB)
Biol.Unit 1 (220 KB)
Biol.Unit 2 (223 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SSOPOX W263T
Authors
:
G. Gotthard, J. Hiblot, E. Chabriere, M. Elias
Date
:
26 Apr 13 (Deposition) - 02 Oct 13 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
(Beta/Alpha)8-Hydrolase, Lactonase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hiblot, G. Gotthard, M. Elias, E. Chabriere
Differential Active Site Loop Conformations Mediate Promiscuous Activities In The Lactonase Ssopox.
Plos One V. 8 75272 2013
[
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Hetero Components
(5, 18)
Info
All Hetero Components
1a: COBALT (II) ION (COa)
1b: COBALT (II) ION (COb)
1c: COBALT (II) ION (COc)
1d: COBALT (II) ION (COd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
3a: FE (II) ION (FE2a)
3b: FE (II) ION (FE2b)
3c: FE (II) ION (FE2c)
3d: FE (II) ION (FE2d)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
4h: GLYCEROL (GOLh)
4i: GLYCEROL (GOLi)
4j: GLYCEROL (GOLj)
4k: GLYCEROL (GOLk)
4l: GLYCEROL (GOLl)
4m: GLYCEROL (GOLm)
4n: GLYCEROL (GOLn)
5a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
5b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
5c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
5d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
6b: DI(HYDROXYETHYL)ETHER (PEGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CO
-1
Ligand/Ion
COBALT (II) ION
2
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
3
FE2
2
Ligand/Ion
FE (II) ION
4
GOL
8
Ligand/Ion
GLYCEROL
5
KCX
2
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
6
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
[
close Hetero Component info
]
Sites
(20, 20)
Info
All Sites
01: AC6 (SOFTWARE)
02: AC8 (SOFTWARE)
03: BC3 (SOFTWARE)
04: BC4 (SOFTWARE)
05: BC5 (SOFTWARE)
06: BC6 (SOFTWARE)
07: BC7 (SOFTWARE)
08: BC8 (SOFTWARE)
09: BC9 (SOFTWARE)
10: CC1 (SOFTWARE)
11: CC2 (SOFTWARE)
12: CC3 (SOFTWARE)
13: CC9 (SOFTWARE)
14: DC1 (SOFTWARE)
15: DC2 (SOFTWARE)
16: DC3 (SOFTWARE)
17: DC4 (SOFTWARE)
18: DC5 (SOFTWARE)
19: DC6 (SOFTWARE)
20: DC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC6
SOFTWARE
ARG A:55 , THR A:281 , GLU A:285 , HOH A:553 , HOH A:631 , PRO B:289 , LYS B:292
BINDING SITE FOR RESIDUE EDO A 406
02
AC8
SOFTWARE
PRO A:289 , ARG A:293 , PRO B:276 , ARG B:277 , HOH B:529 , HOH B:577 , HOH B:586
BINDING SITE FOR RESIDUE GOL A 408
03
BC3
SOFTWARE
PHE A:18 , LYS A:292 , GLU A:298 , HOH A:599 , GLN B:58 , HOH B:659
BINDING SITE FOR RESIDUE EDO B 401
04
BC4
SOFTWARE
HIS B:22 , HIS B:24 , KCX B:137 , ASP B:256 , CO B:403 , HOH B:600
BINDING SITE FOR RESIDUE FE2 B 402
05
BC5
SOFTWARE
KCX B:137 , HIS B:170 , HIS B:199 , FE2 B:402 , HOH B:600
BINDING SITE FOR RESIDUE CO B 403
06
BC6
SOFTWARE
ASN B:160 , LYS B:164 , GLY B:189 , ASP B:191 , HOH B:610 , HOH B:663 , MET C:1
BINDING SITE FOR RESIDUE GOL B 404
07
BC7
SOFTWARE
PRO B:4 , LEU B:5 , LYS B:8 , ASP B:9 , SER B:10 , LEU B:130 , ASN B:131 , LYS B:132
BINDING SITE FOR RESIDUE GOL B 405
08
BC8
SOFTWARE
SER B:171 , ASN B:172 , ALA B:173 , HIS B:174 , ASP B:202 , PHE B:229 , HOH B:597 , HOH B:644
BINDING SITE FOR RESIDUE GOL B 406
09
BC9
SOFTWARE
ALA B:173 , HIS B:174 , ASN B:175 , ASN B:176 , ASN B:205 , TYR B:208
BINDING SITE FOR RESIDUE GOL B 407
10
CC1
SOFTWARE
ARG B:154 , GLU B:188
BINDING SITE FOR RESIDUE PEG B 408
11
CC2
SOFTWARE
HIS B:120 , GLU B:124 , GLY B:128 , THR B:129 , HOH B:518 , HOH B:645
BINDING SITE FOR RESIDUE GOL B 409
12
CC3
SOFTWARE
PHE B:18 , LYS B:292 , GLU B:298 , HOH B:553 , HOH B:640 , HOH B:664
BINDING SITE FOR RESIDUE EDO B 410
13
CC9
SOFTWARE
HIS D:22 , HIS D:24 , KCX D:137 , ASP D:256 , CO D:402 , HOH D:561
BINDING SITE FOR RESIDUE FE2 D 401
14
DC1
SOFTWARE
KCX D:137 , HIS D:170 , HIS D:199 , FE2 D:401 , EDO D:403 , HOH D:561
BINDING SITE FOR RESIDUE CO D 402
15
DC2
SOFTWARE
TYR D:97 , KCX D:137 , HIS D:170 , ARG D:223 , CO D:402 , HOH D:561
BINDING SITE FOR RESIDUE EDO D 403
16
DC3
SOFTWARE
ASN D:172 , ALA D:173 , HIS D:174 , ASP D:202 , PHE D:229 , HOH D:522
BINDING SITE FOR RESIDUE GOL D 404
17
DC4
SOFTWARE
ALA D:173 , HIS D:174 , ASN D:175 , ASN D:176 , ASN D:205
BINDING SITE FOR RESIDUE GOL D 405
18
DC5
SOFTWARE
ASN D:160 , LYS D:164 , GLY D:189 , VAL D:190 , ASP D:191 , LYS D:194
BINDING SITE FOR RESIDUE GOL D 406
19
DC6
SOFTWARE
ARG D:26 , PHE D:28 , GLY D:73 , ARG D:74 , ASP D:75 , MET D:79 , HOH D:524
BINDING SITE FOR RESIDUE EDO D 407
20
DC7
SOFTWARE
VAL D:6 , GLY D:7 , GLU D:80 , LYS D:84 , ASN D:131 , HOH D:536
BINDING SITE FOR RESIDUE EDO D 408
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
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;
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Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4kesa_ (A:)
1b: SCOP_d4kesb_ (B:)
1c: SCOP_d4kesc_ (C:)
1d: SCOP_d4kesd_ (D:)
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Metallo-dependent hydrolases
(273)
Family
:
automated matches
(44)
Protein domain
:
automated matches
(44)
Sulfolobus solfataricus [TaxId: 2287]
(10)
1a
d4kesa_
A:
1b
d4kesb_
B:
1c
d4kesc_
C:
1d
d4kesd_
D:
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein & NOT Site
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Chain B
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Asymmetric Unit 1
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Asym.Unit (447 KB)
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Biol.Unit 1 (220 KB)
Header - Biol.Unit 1
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