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4K8V
Asym. Unit
Info
Asym.Unit (526 KB)
Biol.Unit 1 (134 KB)
Biol.Unit 2 (133 KB)
Biol.Unit 3 (131 KB)
Biol.Unit 4 (132 KB)
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(1)
Title
:
STRUCTURE OF CYCLIC GMP-AMP SYNTHASE (CGAS)
Authors
:
P. Gao, Y. Wu, D. J. Patel
Date
:
18 Apr 13 (Deposition) - 15 May 13 (Release) - 28 Aug 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: C (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: B (1x)
Biol. Unit 4: D (1x)
Keywords
:
Nucleotidyltransferase, Dna, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Gao, M. Ascano, Y. Wu, W. Barchet, B. L. Gaffney, T. Zillinger, A. A. Serganov, Y. Liu, R. A. Jones, G. Hartmann, T. Tuschl, D. J. Patel
Cyclic [G(2', 5')Pa(3', 5')P] Is The Metazoan Second Messenge Produced By Dna-Activated Cyclic Gmp-Amp Synthase.
Cell(Cambridge, Mass. ) V. 153 1094 2013
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
1d: ZINC ION (ZNd)
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No.
Name
Count
Type
Full Name
1
ZN
4
Ligand/Ion
ZINC ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS C:378 , CYS C:384 , CYS C:385 , CYS C:392
BINDING SITE FOR RESIDUE ZN C 601
2
AC2
SOFTWARE
HIS A:378 , CYS A:384 , CYS A:385 , CYS A:392
BINDING SITE FOR RESIDUE ZN A 601
3
AC3
SOFTWARE
HIS B:378 , CYS B:384 , CYS B:385 , CYS B:392
BINDING SITE FOR RESIDUE ZN B 601
4
AC4
SOFTWARE
HIS D:378 , CYS D:384 , CYS D:385 , CYS D:392
BINDING SITE FOR RESIDUE ZN D 601
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d4k8va2 (A:394-507)
1b: SCOP_d4k8vb2 (B:394-507)
1c: SCOP_d4k8vc2 (C:394-507)
1d: SCOP_d4k8vd2 (D:394-507)
2a: SCOP_d4k8va1 (A:146-393)
2b: SCOP_d4k8vb1 (B:146-393)
2c: SCOP_d4k8vc1 (C:146-393)
2d: SCOP_d4k8vd1 (D:146-393)
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Class
:
All alpha proteins
(14657)
Fold
:
PAP/OAS1 substrate-binding domain
(46)
Superfamily
:
PAP/OAS1 substrate-binding domain
(46)
Family
:
cGAMP synthase, cGAS C-terminal domain
(3)
Protein domain
:
cGAMP synthase, cGAS C-terminal domain
(3)
Mouse (Mus musculus) [TaxId: 10090]
(1)
1a
d4k8va2
A:394-507
1b
d4k8vb2
B:394-507
1c
d4k8vc2
C:394-507
1d
d4k8vd2
D:394-507
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nucleotidyltransferase
(287)
Superfamily
:
Nucleotidyltransferase
(287)
Family
:
cGAMP synthase, cGAS N-terminal domain
(3)
Protein domain
:
cGAMP synthase, cGAS N-terminal domain
(3)
Mouse (Mus musculus) [TaxId: 10090]
(1)
2a
d4k8va1
A:146-393
2b
d4k8vb1
B:146-393
2c
d4k8vc1
C:146-393
2d
d4k8vd1
D:146-393
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (526 KB)
Header - Asym.Unit
Biol.Unit 1 (134 KB)
Header - Biol.Unit 1
Biol.Unit 2 (133 KB)
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Biol.Unit 3 (131 KB)
Header - Biol.Unit 3
Biol.Unit 4 (132 KB)
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