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4JXC
Asym. Unit
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Asym.Unit (144 KB)
Biol.Unit 1 (137 KB)
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(1)
Title
:
X-RAY SNAPSHOTS OF POSSIBLE INTERMEDIATES IN THE TIME COURSE OF SYNTHESIS AND DEGRADATION OF PROTEIN-BOUND FE4S4 CLUSTERS
Authors
:
Y. Nicolet, R. Rohac, L. Martin, J. C. Fontecilla-Camps
Date
:
28 Mar 13 (Deposition) - 01 May 13 (Release) - 15 May 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Radical Sam Protein, Fefe-Hydrogenase Active Site Assembly, Fe4S4 Cluster, S-Adenosyl-L-Methionine, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Nicolet, R. Rohac, L. Martin, J. C. Fontecilla-Camps
X-Ray Snapshots Of Possible Intermediates In The Time Cours Of Synthesis And Degradation Of Protein-Bound Fe4S4 Clusters.
Proc. Natl. Acad. Sci. Usa V. 110 7188 2013
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Hetero Components
(10, 16)
Info
All Hetero Components
01a: CHAPSO (1N7a)
01b: CHAPSO (1N7b)
01c: CHAPSO (1N7c)
01d: CHAPSO (1N7d)
01e: CHAPSO (1N7e)
02a: CHLORIDE ION (CLa)
02b: CHLORIDE ION (CLb)
03a: S-HYDROXYCYSTEINE (CSOa)
04a: FE2/S2 (INORGANIC) CLUSTER (FESa)
05a: GLYCEROL (GOLa)
06a: HYDROSULFURIC ACID (H2Sa)
06b: HYDROSULFURIC ACID (H2Sb)
07a: ISOPROPYL ALCOHOL (IPAa)
08a: S-ADENOSYLMETHIONINE (SAMa)
09a: IRON/SULFUR CLUSTER (SF4a)
10a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
1N7
5
Ligand/Ion
CHAPSO
2
CL
2
Ligand/Ion
CHLORIDE ION
3
CSO
1
Mod. Amino Acid
S-HYDROXYCYSTEINE
4
FES
1
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
5
GOL
1
Ligand/Ion
GLYCEROL
6
H2S
2
Ligand/Ion
HYDROSULFURIC ACID
7
IPA
1
Ligand/Ion
ISOPROPYL ALCOHOL
8
SAM
1
Ligand/Ion
S-ADENOSYLMETHIONINE
9
SF4
1
Ligand/Ion
IRON/SULFUR CLUSTER
10
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:63 , CYS A:67 , CYS A:70 , GLY A:109 , SAM A:402
BINDING SITE FOR RESIDUE SF4 A 401
02
AC2
SOFTWARE
TYR A:69 , SER A:108 , SER A:136 , GLY A:138 , ARG A:159 , GLU A:161 , ARG A:180 , MET A:199 , PRO A:229 , ILE A:231 , TYR A:303 , LEU A:305 , TYR A:306 , SF4 A:401 , HOH A:511 , HOH A:517 , HOH A:519 , HOH A:528 , HOH A:567
BINDING SITE FOR RESIDUE SAM A 402
03
AC3
SOFTWARE
GLN A:98 , PHE A:99 , GLY A:100 , GLU A:280 , ARG A:284 , MET A:324 , LEU A:330 , 1N7 A:406 , 1N7 A:407 , IPA A:412 , HOH A:508 , HOH A:544 , HOH A:594 , HOH A:606 , HOH A:812 , HOH A:813
BINDING SITE FOR RESIDUE 1N7 A 403
04
AC4
SOFTWARE
LYS A:37 , ASP A:40 , LYS A:170 , ARG A:284 , SER A:297 , LYS A:315 , ASP A:316 , THR A:317 , HOH A:598 , HOH A:648 , HOH A:676 , HOH A:695 , HOH A:701 , HOH A:821
BINDING SITE FOR RESIDUE 1N7 A 404
05
AC5
SOFTWARE
ARG A:29 , GLU A:33 , THR A:247 , LEU A:250 , 1N7 A:406 , HOH A:593 , HOH A:597 , HOH A:603 , HOH A:798
BINDING SITE FOR RESIDUE 1N7 A 405
06
AC6
SOFTWARE
ARG A:29 , LYS A:315 , THR A:317 , ALA A:318 , 1N7 A:403 , 1N7 A:405 , 1N7 A:407 , HOH A:632 , HOH A:728 , HOH A:828
BINDING SITE FOR RESIDUE 1N7 A 406
07
AC7
SOFTWARE
LYS A:128 , PRO A:321 , MET A:324 , LYS A:325 , GLU A:328 , 1N7 A:403 , 1N7 A:406 , HOH A:530 , HOH A:744 , HOH A:799 , HOH A:805
BINDING SITE FOR RESIDUE 1N7 A 407
08
AC8
SOFTWARE
VAL A:47 , HIS A:52 , ASP A:262 , ASN A:264 , GLY A:340 , ARG A:341 , LYS A:342 , HOH A:550
BINDING SITE FOR RESIDUE GOL A 408
09
AC9
SOFTWARE
ARG A:279 , CYS A:311 , CYS A:319 , CYS A:322 , VAL A:323 , H2S A:410 , H2S A:411 , HOH A:622
BINDING SITE FOR RESIDUE FES A 409
10
BC1
SOFTWARE
CYS A:311 , CYS A:319 , FES A:409
BINDING SITE FOR RESIDUE H2S A 410
11
BC2
SOFTWARE
ARG A:279 , CYS A:322 , MET A:326 , FES A:409
BINDING SITE FOR RESIDUE H2S A 411
12
BC3
SOFTWARE
LYS A:102 , LYS A:325 , 1N7 A:403 , HOH A:570 , HOH A:779
BINDING SITE FOR RESIDUE IPA A 412
13
BC4
SOFTWARE
ARG A:54 , THR A:134 , ARG A:155 , MET A:224
BINDING SITE FOR RESIDUE CL A 413
14
BC5
SOFTWARE
ARG A:159 , THR A:269 , ALA A:270 , TYR A:306 , HOH A:822
BINDING SITE FOR RESIDUE CL A 414
15
BC6
SOFTWARE
ASP A:337 , TRP A:338 , GLY A:339 , GLY A:340 , LYS A:342 , HOH A:536 , HOH A:720
BINDING SITE FOR RESIDUE SO4 A 415
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Chain A
Asymmetric Unit 1
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