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Asym. Unit
Info
Asym.Unit (310 KB)
Biol.Unit 1 (35 KB)
Biol.Unit 10 (35 KB)
Biol.Unit 2 (35 KB)
Biol.Unit 3 (35 KB)
Biol.Unit 4 (35 KB)
Biol.Unit 5 (35 KB)
Biol.Unit 6 (35 KB)
Biol.Unit 7 (35 KB)
Biol.Unit 8 (34 KB)
Biol.Unit 9 (35 KB)
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(1)
Title
:
2.2A RESOLUTION STRUCTURE OF HOLO HEMOPHORE HASA FROM YERSINIA PESTIS
Authors
:
R. Kumar, S. Lovell, K. P. Battaile, M. Rivera
Date
:
27 Feb 13 (Deposition) - 24 Apr 13 (Release) - 29 May 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Biol. Unit 10: J (1x)
Keywords
:
Heme Binding Protein, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Kumar, S. Lovell, H. Matsumura, K. P. Battaile, P. Moenne-Loccoz, M. Rivera
The Hemophore Hasa From Yersinia Pestis (Hasayp) Coordinate Hemin With A Single Residue, Tyr75, And With Minimal Conformational Change.
Biochemistry V. 52 2705 2013
[
close entry info
]
Hetero Components
(2, 20)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
2c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
2d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
2e: PROTOPORPHYRIN IX CONTAINING FE (HEMe)
2f: PROTOPORPHYRIN IX CONTAINING FE (HEMf)
2g: PROTOPORPHYRIN IX CONTAINING FE (HEMg)
2h: PROTOPORPHYRIN IX CONTAINING FE (HEMh)
2i: PROTOPORPHYRIN IX CONTAINING FE (HEMi)
2j: PROTOPORPHYRIN IX CONTAINING FE (HEMj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
10
Ligand/Ion
CHLORIDE ION
2
HEM
10
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
[
close Hetero Component info
]
Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:40 , GLY A:41 , TYR A:55 , TYR A:75 , HIS A:81 , VAL A:143 , ARG A:144 , MET A:147 , CL A:202 , HOH A:327 , HOH A:352 , HOH A:363 , HOH A:388 , ARG H:40 , HEM H:201
BINDING SITE FOR RESIDUE HEM A 201
02
AC2
SOFTWARE
ARG A:40 , ARG A:144 , MET A:147 , HEM A:201
BINDING SITE FOR RESIDUE CL A 202
03
AC3
SOFTWARE
ARG B:40 , GLY B:41 , TYR B:55 , TYR B:75 , HIS B:81 , PHE B:83 , MET B:131 , ARG B:144 , MET B:147 , CL B:202 , HOH B:309 , HOH B:385 , ARG F:40 , MET F:78 , HEM F:201
BINDING SITE FOR RESIDUE HEM B 201
04
AC4
SOFTWARE
ARG B:40 , ARG B:144 , HEM B:201
BINDING SITE FOR RESIDUE CL B 202
05
AC5
SOFTWARE
ARG C:40 , GLY C:41 , TYR C:55 , TYR C:75 , MET C:78 , HIS C:81 , PHE C:83 , ARG C:144 , MET C:147 , CL C:202 , ARG I:40 , HEM I:201 , HOH I:356
BINDING SITE FOR RESIDUE HEM C 201
06
AC6
SOFTWARE
ARG C:40 , HEM C:201
BINDING SITE FOR RESIDUE CL C 202
07
AC7
SOFTWARE
ARG D:40 , TYR D:55 , TYR D:75 , HIS D:81 , PHE D:83 , MET D:131 , ARG D:144 , MET D:147 , CL D:202 , HOH D:324 , HEM E:201
BINDING SITE FOR RESIDUE HEM D 201
08
AC8
SOFTWARE
ARG D:40 , ARG D:144 , HEM D:201
BINDING SITE FOR RESIDUE CL D 202
09
AC9
SOFTWARE
HEM D:201 , ARG E:40 , GLY E:41 , TYR E:55 , TYR E:75 , HIS E:81 , PHE E:83 , MET E:131 , HIS E:135 , ARG E:144 , MET E:147 , CL E:202
BINDING SITE FOR RESIDUE HEM E 201
10
BC1
SOFTWARE
ARG E:40 , HEM E:201
BINDING SITE FOR RESIDUE CL E 202
11
BC2
SOFTWARE
ARG B:40 , MET B:78 , HEM B:201 , ARG F:40 , GLY F:41 , TYR F:55 , TYR F:75 , HIS F:81 , PHE F:83 , ARG F:144 , MET F:147 , CL F:202 , HOH F:330
BINDING SITE FOR RESIDUE HEM F 201
12
BC3
SOFTWARE
ARG F:40 , ARG F:144 , HEM F:201
BINDING SITE FOR RESIDUE CL F 202
13
BC4
SOFTWARE
ARG G:40 , GLY G:41 , PHE G:50 , TYR G:55 , TYR G:75 , MET G:78 , HIS G:81 , PHE G:83 , ARG G:144 , MET G:147 , CL G:202 , ARG J:40 , MET J:78 , HEM J:201
BINDING SITE FOR RESIDUE HEM G 201
14
BC5
SOFTWARE
ARG G:40 , ARG G:144 , HEM G:201
BINDING SITE FOR RESIDUE CL G 202
15
BC6
SOFTWARE
ARG A:40 , MET A:78 , HEM A:201 , ARG H:40 , GLY H:41 , TYR H:75 , HIS H:81 , PHE H:83 , ARG H:144 , MET H:147 , CL H:202 , HOH H:328 , HOH H:337
BINDING SITE FOR RESIDUE HEM H 201
16
BC7
SOFTWARE
ARG H:40 , HEM H:201
BINDING SITE FOR RESIDUE CL H 202
17
BC8
SOFTWARE
ARG C:40 , MET C:78 , HEM C:201 , ARG I:40 , GLY I:41 , PHE I:50 , TYR I:55 , TYR I:75 , HIS I:81 , PHE I:83 , ARG I:144 , MET I:147 , CL I:202 , HOH I:326 , HOH I:366
BINDING SITE FOR RESIDUE HEM I 201
18
BC9
SOFTWARE
ARG I:40 , ARG I:144 , HEM I:201
BINDING SITE FOR RESIDUE CL I 202
19
CC1
SOFTWARE
ARG G:40 , MET G:78 , HEM G:201 , ARG J:40 , GLY J:41 , PHE J:43 , TYR J:55 , TYR J:75 , MET J:78 , HIS J:81 , PHE J:83 , ARG J:144 , MET J:147 , CL J:202
BINDING SITE FOR RESIDUE HEM J 201
20
CC2
SOFTWARE
ARG J:40 , HEM J:201
BINDING SITE FOR RESIDUE CL J 202
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d4jeta_ (A:)
1b: SCOP_d4jeth_ (H:)
1c: SCOP_d4jeti_ (I:)
1d: SCOP_d4jetj_ (J:)
1e: SCOP_d4jetb_ (B:)
1f: SCOP_d4jetc_ (C:)
1g: SCOP_d4jetd_ (D:)
1h: SCOP_d4jete_ (E:)
1i: SCOP_d4jetf_ (F:)
1j: SCOP_d4jetg_ (G:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Heme-binding protein A (HasA)
(12)
Superfamily
:
Heme-binding protein A (HasA)
(12)
Family
:
automated matches
(4)
Protein domain
:
automated matches
(4)
Yersinia pestis [TaxId: 632]
(3)
1a
d4jeta_
A:
1b
d4jeth_
H:
1c
d4jeti_
I:
1d
d4jetj_
J:
1e
d4jetb_
B:
1f
d4jetc_
C:
1g
d4jetd_
D:
1h
d4jete_
E:
1i
d4jetf_
F:
1j
d4jetg_
G:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
[
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Pfam Domains
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Sorry, no Info available
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