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4J2V
Asym. Unit
Info
Asym.Unit (208 KB)
Biol.Unit 1 (201 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF EQUINE SERUM ALBUMIN IN COMPLEX WITH 3,5-DIIODOSALICYLIC ACID
Authors
:
B. Sekula, A. Bujacz, K. Zielinski, G. Bujacz
Date
:
05 Feb 13 (Deposition) - 24 Jul 13 (Release) - 24 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.12
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Equine Serum Albumin, Transport Protein, Helical, Serum Albumin Superfamily, Transport, Fatty Acids, Metabolites And Drugs, Plasma
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Sekula, K. Zielinski, A. Bujacz
Crystallographic Studies Of The Complexes Of Bovine And Equine Serum Albumin With 3, 5-Diiodosalicylic Acid.
Int. J. Biol. Macromol. V. 60C 316 2013
[
close entry info
]
Hetero Components
(4, 20)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: 2-HYDROXY-3,5-DIIODO-BENZOIC ACID (DIUa)
2b: 2-HYDROXY-3,5-DIIODO-BENZOIC ACID (DIUb)
2c: 2-HYDROXY-3,5-DIIODO-BENZOIC ACID (DIUc)
2d: 2-HYDROXY-3,5-DIIODO-BENZOIC ACID (DIUd)
3a: FORMIC ACID (FMTa)
3b: FORMIC ACID (FMTb)
3c: FORMIC ACID (FMTc)
3d: FORMIC ACID (FMTd)
3e: FORMIC ACID (FMTe)
3f: FORMIC ACID (FMTf)
3g: FORMIC ACID (FMTg)
3h: FORMIC ACID (FMTh)
4a: MALONATE ION (MLIa)
4b: MALONATE ION (MLIb)
4c: MALONATE ION (MLIc)
4d: MALONATE ION (MLId)
4e: MALONATE ION (MLIe)
4f: MALONATE ION (MLIf)
4g: MALONATE ION (MLIg)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
DIU
4
Ligand/Ion
2-HYDROXY-3,5-DIIODO-BENZOIC ACID
3
FMT
8
Ligand/Ion
FORMIC ACID
4
MLI
7
Ligand/Ion
MALONATE ION
[
close Hetero Component info
]
Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:149 , PHE A:222 , LEU A:237 , HIS A:241 , ARG A:256 , ALA A:260 , ILE A:263 , ILE A:289 , ALA A:290 , HOH A:858 , HOH A:862
BINDING SITE FOR RESIDUE DIU A 601
02
AC2
SOFTWARE
LEU A:386 , ASN A:390 , PHE A:402 , LEU A:406 , ARG A:409 , VAL A:432 , SER A:448 , LEU A:452 , ARG A:484 , SER A:488 , MLI A:607 , HOH A:869
BINDING SITE FOR RESIDUE DIU A 602
03
AC3
SOFTWARE
LEU A:115 , LYS A:116 , PRO A:117 , GLN A:122 , TYR A:137 , TYR A:160 , LEU A:181 , ASP A:182 , ILE A:188 , HOH A:905 , HOH A:913
BINDING SITE FOR RESIDUE DIU A 603
04
AC4
SOFTWARE
LEU A:393 , VAL A:397 , ASP A:401 , ASN A:404 , ALA A:405 , LYS A:540 , LYS A:544
BINDING SITE FOR RESIDUE DIU A 604
05
AC5
SOFTWARE
GLU A:6 , LEU A:66 , HIS A:67 , PHE A:70 , GLY A:247 , ASP A:248 , LEU A:249 , LEU A:250 , GLU A:251
BINDING SITE FOR RESIDUE MLI A 605
06
AC6
SOFTWARE
PHE A:501 , HIS A:534 , LYS A:535 , GLN A:579 , HOH A:762
BINDING SITE FOR RESIDUE MLI A 606
07
AC7
SOFTWARE
LEU A:386 , ASN A:390 , ARG A:409 , LYS A:413 , SER A:488 , DIU A:602 , ACT A:620 , HOH A:745 , HOH A:821 , HOH A:869
BINDING SITE FOR RESIDUE MLI A 607
08
AC8
SOFTWARE
LEU A:197 , SER A:201 , ALA A:209 , VAL A:210 , TRP A:213 , LEU A:346 , LEU A:480 , HOH A:825 , HOH A:839 , HOH A:863 , HOH A:928
BINDING SITE FOR RESIDUE MLI A 608
09
AC9
SOFTWARE
LEU A:189 , LEU A:190 , ALA A:193 , THR A:428 , ARG A:435 , HIS A:451 , LEU A:454 , ALA A:455 , HOH A:859 , HOH A:864
BINDING SITE FOR RESIDUE MLI A 609
10
BC1
SOFTWARE
ALA A:212 , LEU A:330 , ALA A:349 , LYS A:350 , GLU A:353 , FMT A:617
BINDING SITE FOR RESIDUE MLI A 610
11
BC2
SOFTWARE
LEU A:14 , HIS A:18 , PRO A:151 , ALA A:253 , ARG A:256 , ALA A:257 , LEU A:282 , LEU A:283 , SER A:286
BINDING SITE FOR RESIDUE MLI A 611
12
BC3
SOFTWARE
LEU A:115 , ARG A:144 , HIS A:145 , LYS A:185 , LEU A:189 , HOH A:832 , HOH A:861
BINDING SITE FOR RESIDUE FMT A 612
13
BC4
SOFTWARE
SER A:418 , THR A:419 , LYS A:499 , GLU A:530 , LYS A:533 , FMT A:615
BINDING SITE FOR RESIDUE FMT A 613
14
BC5
SOFTWARE
LYS A:194 , TRP A:213 , ARG A:217 , HOH A:824 , HOH A:880 , HOH A:897
BINDING SITE FOR RESIDUE FMT A 614
15
BC6
SOFTWARE
PRO A:415 , GLN A:416 , LYS A:499 , LYS A:533 , FMT A:613
BINDING SITE FOR RESIDUE FMT A 615
16
BC7
SOFTWARE
HIS A:109 , ASN A:111 , LYS A:114 , PRO A:420 , GLU A:424 , HOH A:885 , HOH A:911
BINDING SITE FOR RESIDUE FMT A 616
17
BC8
SOFTWARE
GLY A:327 , LEU A:330 , MLI A:610
BINDING SITE FOR RESIDUE FMT A 617
18
BC9
SOFTWARE
ASP A:108 , HIS A:109 , PRO A:110 , ASN A:111 , ARG A:458 , FMT A:619 , HOH A:840
BINDING SITE FOR RESIDUE FMT A 618
19
CC1
SOFTWARE
ASN A:111 , LEU A:112 , ARG A:144 , FMT A:618 , HOH A:832 , HOH A:861
BINDING SITE FOR RESIDUE FMT A 619
20
CC2
SOFTWARE
ARG A:409 , LYS A:412 , LYS A:413 , MLI A:607
BINDING SITE FOR RESIDUE ACT A 620
[
close Site info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Sorry, no Info available
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d4j2va1 (A:3-195)
1b: SCOP_d4j2va2 (A:196-387)
1c: SCOP_d4j2va3 (A:388-583)
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Protein Domains
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Organisms
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)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Serum albumin-like
(99)
Superfamily
:
Serum albumin-like
(99)
Family
:
automated matches
(24)
Protein domain
:
automated matches
(24)
Horse (Equus caballus) [TaxId: 9796]
(4)
1a
d4j2va1
A:3-195
1b
d4j2va2
A:196-387
1c
d4j2va3
A:388-583
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
[
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Atom Selection
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
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wireframe 100
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Asym.Unit (208 KB)
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