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4ITA
Asym. Unit
Info
Asym.Unit (163 KB)
Biol.Unit 1 (157 KB)
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(1)
Title
:
STRUCTURE OF BACTERIAL ENZYME IN COMPLEX WITH COFACTOR
Authors
:
S. Rhee, J. Park
Date
:
18 Jan 13 (Deposition) - 24 Apr 13 (Release) - 26 Jun 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Rossmann Fold, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Park, S. Rhee
Structural Basis For A Cofactor-Dependent Oxidation Protection And Catalysis Of Cyanobacterial Succinic Semialdehyde Dehydrogenase.
J. Biol. Chem. V. 288 15760 2013
[
close entry info
]
Hetero Components
(2, 36)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1aa: 1,2-ETHANEDIOL (EDOaa)
1ab: 1,2-ETHANEDIOL (EDOab)
1ac: 1,2-ETHANEDIOL (EDOac)
1ad: 1,2-ETHANEDIOL (EDOad)
1ae: 1,2-ETHANEDIOL (EDOae)
1af: 1,2-ETHANEDIOL (EDOaf)
1ag: 1,2-ETHANEDIOL (EDOag)
1ah: 1,2-ETHANEDIOL (EDOah)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
1s: 1,2-ETHANEDIOL (EDOs)
1t: 1,2-ETHANEDIOL (EDOt)
1u: 1,2-ETHANEDIOL (EDOu)
1v: 1,2-ETHANEDIOL (EDOv)
1w: 1,2-ETHANEDIOL (EDOw)
1x: 1,2-ETHANEDIOL (EDOx)
1y: 1,2-ETHANEDIOL (EDOy)
1z: 1,2-ETHANEDIOL (EDOz)
2a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
2b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
34
Ligand/Ion
1,2-ETHANEDIOL
2
NDP
2
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
[
close Hetero Component info
]
Sites
(36, 36)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
VAL A:127 , MET A:128 , TRP A:130 , ASN A:131 , GLN A:136 , ARG A:139 , LYS A:154 , HIS A:155 , ALA A:156 , SER A:157 , ALA A:187 , THR A:205 , GLY A:206 , SER A:207 , ALA A:210 , SER A:213 , GLU A:228 , LEU A:229 , GLY A:230 , CYS A:262 , GLU A:359 , PHE A:361 , PHE A:425 , EDO A:511 , EDO A:513 , HOH A:637 , HOH A:676 , HOH A:677 , HOH A:721 , HOH A:741 , HOH A:743 , HOH A:879 , HOH A:897 , HOH A:910
BINDING SITE FOR RESIDUE NDP A 501
02
AC2
SOFTWARE
GLN A:319 , ALA A:353 , LYS A:354 , ILE A:355 , HOH A:692
BINDING SITE FOR RESIDUE EDO A 502
03
AC3
SOFTWARE
GLU A:167 , GLU A:171 , PHE A:175 , PRO A:176 , VAL A:179 , PHE A:180 , HOH A:605 , HOH A:630 , HOH A:693
BINDING SITE FOR RESIDUE EDO A 503
04
AC4
SOFTWARE
PRO A:143 , ALA A:144 , ASN A:149 , GLY A:441 , ILE A:442 , THR A:444 , PHE A:445 , HOH A:650
BINDING SITE FOR RESIDUE EDO A 504
05
AC5
SOFTWARE
LEU A:310 , ARG A:336 , GLY A:338 , TYR A:339 , HOH A:615
BINDING SITE FOR RESIDUE EDO A 505
06
AC6
SOFTWARE
PRO A:22 , ARG A:48 , GLU A:96 , SER A:188 , GLN A:189 , HOH A:718
BINDING SITE FOR RESIDUE EDO A 506
07
AC7
SOFTWARE
GLN A:316 , GLU A:359 , LEU A:360 , PHE A:361 , EDO A:513
BINDING SITE FOR RESIDUE EDO A 507
08
AC8
SOFTWARE
GLU A:34 , ALA A:35 , GLU A:177 , HOH A:664 , HOH A:908 , SER B:45
BINDING SITE FOR RESIDUE EDO A 508
09
AC9
SOFTWARE
PRO A:224 , THR A:225 , TYR A:433 , HOH A:787 , HOH A:822 , PRO B:224 , THR B:225
BINDING SITE FOR RESIDUE EDO A 509
10
BC1
SOFTWARE
ASP A:372 , ASP A:374 , HOH A:699 , ALA B:397 , ARG B:401
BINDING SITE FOR RESIDUE EDO A 510
11
BC2
SOFTWARE
SER A:207 , GLU A:208 , GLY A:230 , GLU A:359 , NDP A:501 , HOH A:748
BINDING SITE FOR RESIDUE EDO A 511
12
BC3
SOFTWARE
GLU A:99 , GLN A:100 , GLN A:192 , HOH A:614 , HOH A:730
BINDING SITE FOR RESIDUE EDO A 512
13
BC4
SOFTWARE
GLU A:359 , PHE A:361 , NDP A:501 , EDO A:507
BINDING SITE FOR RESIDUE EDO A 513
14
BC5
SOFTWARE
TYR A:106 , GLU A:108 , GLN A:220 , HOH A:848 , HOH B:734
BINDING SITE FOR RESIDUE EDO A 514
15
BC6
SOFTWARE
GLY A:409 , PRO A:424 , PHE A:425 , GLY A:426 , ARG A:435 , HOH A:812 , HOH A:938 , ALA B:448 , THR B:450
BINDING SITE FOR RESIDUE EDO A 515
16
BC7
SOFTWARE
PHE A:132 , TRP A:135 , GLN A:136 , ARG A:139 , CYS A:262 , SER A:419 , HOH A:711 , HOH A:794
BINDING SITE FOR RESIDUE EDO A 516
17
BC8
SOFTWARE
ARG A:40 , ARG A:47 , PRO A:120 , ALA A:147 , HOH A:829 , HOH A:846
BINDING SITE FOR RESIDUE EDO A 517
18
BC9
SOFTWARE
VAL B:127 , MET B:128 , TRP B:130 , ASN B:131 , GLN B:136 , ARG B:139 , LYS B:154 , HIS B:155 , ALA B:156 , SER B:157 , ALA B:187 , THR B:205 , GLY B:206 , SER B:207 , ALA B:210 , SER B:213 , GLU B:228 , LEU B:229 , GLY B:230 , CYS B:262 , GLU B:359 , PHE B:361 , PHE B:425 , EDO B:515 , HOH B:649 , HOH B:669 , HOH B:689 , HOH B:692 , HOH B:744 , HOH B:757 , HOH B:832 , HOH B:840 , HOH B:853 , HOH B:855
BINDING SITE FOR RESIDUE NDP B 501
19
CC1
SOFTWARE
ILE B:3 , LYS B:154 , HIS B:155 , ALA B:156 , SER B:157 , PRO B:160 , LEU B:183 , LEU B:184 , ILE B:185 , HOH B:602
BINDING SITE FOR RESIDUE EDO B 502
20
CC2
SOFTWARE
PRO B:22 , ARG B:48 , GLU B:96 , SER B:188 , GLN B:189 , HOH B:718
BINDING SITE FOR RESIDUE EDO B 503
21
CC3
SOFTWARE
GLU B:167 , GLU B:171 , PHE B:175 , PRO B:176 , VAL B:179 , PHE B:180 , HOH B:620 , HOH B:636 , HOH B:709
BINDING SITE FOR RESIDUE EDO B 504
22
CC4
SOFTWARE
GLU B:99 , GLN B:100 , GLN B:192 , HOH B:614 , HOH B:745
BINDING SITE FOR RESIDUE EDO B 505
23
CC5
SOFTWARE
LEU B:310 , ARG B:336 , GLY B:338 , HOH B:630
BINDING SITE FOR RESIDUE EDO B 506
24
CC6
SOFTWARE
GLN B:316 , GLU B:359 , LEU B:360 , PHE B:361 , HOH B:910
BINDING SITE FOR RESIDUE EDO B 507
25
CC7
SOFTWARE
GLN A:46 , ALA B:38 , TYR B:39 , THR B:42 , PRO B:176 , HOH B:643
BINDING SITE FOR RESIDUE EDO B 508
26
CC8
SOFTWARE
SER B:288 , LEU B:289 , ASP B:300 , HOH B:680 , HOH B:754 , HOH B:880
BINDING SITE FOR RESIDUE EDO B 509
27
CC9
SOFTWARE
GLU B:96 , GLY B:186 , ALA B:187 , SER B:188 , HOH B:935
BINDING SITE FOR RESIDUE EDO B 510
28
DC1
SOFTWARE
LEU A:121 , ASN A:447 , HOH A:668 , ASP B:407 , THR B:428 , LYS B:429
BINDING SITE FOR RESIDUE EDO B 511
29
DC2
SOFTWARE
PHE B:132 , TRP B:135 , GLN B:136 , CYS B:262 , SER B:419 , EDO B:518 , HOH B:682 , HOH B:813
BINDING SITE FOR RESIDUE EDO B 512
30
DC3
SOFTWARE
GLN B:319 , ALA B:353 , LYS B:354 , ILE B:355 , HOH B:698
BINDING SITE FOR RESIDUE EDO B 513
31
DC4
SOFTWARE
PRO B:143 , ALA B:144 , ASN B:149 , GLY B:441 , ILE B:442 , THR B:444 , PHE B:445 , HOH B:671
BINDING SITE FOR RESIDUE EDO B 514
32
DC5
SOFTWARE
SER B:207 , GLU B:208 , GLY B:230 , GLU B:359 , NDP B:501 , HOH B:751
BINDING SITE FOR RESIDUE EDO B 515
33
DC6
SOFTWARE
ALA A:397 , ARG A:401 , ASP B:372 , ASP B:374 , HOH B:703
BINDING SITE FOR RESIDUE EDO B 516
34
DC7
SOFTWARE
TYR B:106 , GLU B:108 , GLN B:220 , HOH B:738 , HOH B:793
BINDING SITE FOR RESIDUE EDO B 517
35
DC8
SOFTWARE
GLU B:83 , LYS B:86 , PHE B:132 , EDO B:512 , HOH B:750
BINDING SITE FOR RESIDUE EDO B 518
36
DC9
SOFTWARE
ALA A:448 , THR A:450 , GLY B:409 , PRO B:424 , PHE B:425 , GLY B:426 , ARG B:435 , HOH B:944
BINDING SITE FOR RESIDUE EDO B 519
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
[
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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Asym.Unit (163 KB)
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