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4ISA
Asym. Unit
Info
Asym.Unit (114 KB)
Biol.Unit 1 (108 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI LPXC/BB-78485 COMPLEX
Authors
:
C. -J. Lee, P. Zhou
Date
:
16 Jan 13 (Deposition) - 30 Oct 13 (Release) - 12 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Lipid A Synthesis, Lpxc, Baab Sandwich, Deacetylation, Antibiotic, Acyl Udp-Glcnac, Hydroxamate, Bb-78485, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. J. Lee, X. Liang, R. Gopalaswamy, J. Najeeb, E. D. Ark, E. J. Toone, P. Zhou
Structural Basis Of The Promiscuous Inhibitor Susceptibilit Of Escherichia Coli Lpxc.
Acs Chem. Biol. V. 9 237 2014
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Hetero Components
(4, 21)
Info
All Hetero Components
1a: (4S,5S)-1,2-DITHIANE-4,5-DIOL (D1Da)
2a: FORMIC ACID (FMTa)
2b: FORMIC ACID (FMTb)
2c: FORMIC ACID (FMTc)
2d: FORMIC ACID (FMTd)
2e: FORMIC ACID (FMTe)
2f: FORMIC ACID (FMTf)
2g: FORMIC ACID (FMTg)
2h: FORMIC ACID (FMTh)
2i: FORMIC ACID (FMTi)
2j: FORMIC ACID (FMTj)
2k: FORMIC ACID (FMTk)
2l: FORMIC ACID (FMTl)
2m: FORMIC ACID (FMTm)
2n: FORMIC ACID (FMTn)
2o: FORMIC ACID (FMTo)
2p: FORMIC ACID (FMTp)
2q: FORMIC ACID (FMTq)
3a: (2R)-N-HYDROXY-3-NAPHTHALEN-2-YL-2... (GVRa)
3b: (2R)-N-HYDROXY-3-NAPHTHALEN-2-YL-2... (GVRb)
4a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
D1D
1
Ligand/Ion
(4S,5S)-1,2-DITHIANE-4,5-DIOL
2
FMT
17
Ligand/Ion
FORMIC ACID
3
GVR
2
Ligand/Ion
(2R)-N-HYDROXY-3-NAPHTHALEN-2-YL-2-[(NAPHTHALEN-2-YLSULFONYL)AMINO]PROPANAMIDE
4
ZN
1
Ligand/Ion
ZINC ION
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Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:79 , HIS A:238 , ASP A:242 , GVR A:402
BINDING SITE FOR RESIDUE ZN A 401
02
AC2
SOFTWARE
LEU A:18 , LEU A:62 , CYS A:63 , THR A:76 , GLU A:78 , HIS A:79 , ILE A:103 , THR A:191 , PHE A:192 , GLY A:193 , ILE A:198 , CYS A:214 , ALA A:215 , HIS A:238 , ASP A:242 , HIS A:265 , ZN A:401
BINDING SITE FOR RESIDUE GVR A 402
03
AC3
SOFTWARE
MET A:61 , LEU A:116 , ASP A:180 , MET A:183 , ARG A:184 , ASP A:197 , TYR A:200 , LEU A:201 , PRO A:300 , FMT A:404 , FMT A:412 , D1D A:421
BINDING SITE FOR RESIDUE GVR A 403
04
AC4
SOFTWARE
GVR A:403 , HOH A:1229 , HOH A:1277
BINDING SITE FOR RESIDUE FMT A 404
05
AC5
SOFTWARE
MET A:195 , ILE A:198 , HOH A:1230 , HOH A:1260 , HOH A:1262
BINDING SITE FOR RESIDUE FMT A 405
06
AC6
SOFTWARE
LYS A:143 , ALA A:181 , ARG A:184 , GLN A:185
BINDING SITE FOR RESIDUE FMT A 406
07
AC7
SOFTWARE
TYR A:221 , ARG A:222 , ASP A:227 , HOH A:1094 , HOH A:1280
BINDING SITE FOR RESIDUE FMT A 407
08
AC8
SOFTWARE
ASP A:160 , PHE A:161 , ASN A:162 , ARG A:184 , GLN A:185
BINDING SITE FOR RESIDUE FMT A 408
09
AC9
SOFTWARE
THR A:60 , LEU A:62 , CYS A:63 , HOH A:1256
BINDING SITE FOR RESIDUE FMT A 409
10
BC1
SOFTWARE
MET A:104 , ASP A:105 , PRO A:110 , HOH A:1119 , HOH A:1148
BINDING SITE FOR RESIDUE FMT A 410
11
BC2
SOFTWARE
PHE A:161 , ARG A:184 , PHE A:192 , GVR A:403
BINDING SITE FOR RESIDUE FMT A 412
12
BC3
SOFTWARE
LYS A:55 , HOH A:1307
BINDING SITE FOR RESIDUE FMT A 413
13
BC4
SOFTWARE
ARG A:196 , HOH A:1296
BINDING SITE FOR RESIDUE FMT A 414
14
BC5
SOFTWARE
TRP A:144 , TYR A:261 , HOH A:1159
BINDING SITE FOR RESIDUE FMT A 415
15
BC6
SOFTWARE
GLU A:134 , THR A:135
BINDING SITE FOR RESIDUE FMT A 416
16
BC7
SOFTWARE
SER A:154 , LEU A:155 , MET A:175 , ASN A:176
BINDING SITE FOR RESIDUE FMT A 417
17
BC8
SOFTWARE
ARG A:29
BINDING SITE FOR RESIDUE FMT A 418
18
BC9
SOFTWARE
ASP A:71 , TYR A:284
BINDING SITE FOR RESIDUE FMT A 419
19
CC1
SOFTWARE
PHE A:153 , ASN A:253 , ILE A:254 , PHE A:297 , HOH A:1002 , HOH A:1050
BINDING SITE FOR RESIDUE FMT A 420
20
CC2
SOFTWARE
TYR A:113 , MET A:183 , SER A:187 , ARG A:188 , ASP A:197 , GVR A:403 , HOH A:1043
BINDING SITE FOR RESIDUE D1D A 421
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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