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4IL0
Biol. Unit 1
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Asym.Unit (1.1 MB)
Biol.Unit 1 (554 KB)
Biol.Unit 2 (544 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GLUCDRP FROM E. COLI K-12 MG1655 (EFI TARGET EFI-506058)
Authors
:
T. Lukk, S. Ghasempur, H. J. Imker, J. A. Gerlt, S. K. Nair, Enzyme Funct Initiative (Efi)
Date
:
28 Dec 12 (Deposition) - 16 Jan 13 (Release) - 16 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,E,F (1x)
Biol. Unit 2: C,D,G,H (1x)
Keywords
:
Tim-Barrel, Dehydratase, Glucd, Lyase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
T. Lukk, S. Ghasempur, H. J. Imker, S. K. Nair, J. A. Gerlt
Glucarate Dehydratase And Its Related Protein From Escherichia Coli Form A Heterotetrameric Complex.
To Be Published
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: CITRIC ACID (CITa)
1b: CITRIC ACID (CITb)
1c: CITRIC ACID (CITc)
1d: CITRIC ACID (CITd)
1e: CITRIC ACID (CITe)
1f: CITRIC ACID (CITf)
1g: CITRIC ACID (CITg)
1h: CITRIC ACID (CITh)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
View:
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No.
Name
Count
Type
Full Name
1
CIT
4
Ligand/Ion
CITRIC ACID
2
GOL
1
Ligand/Ion
GLYCEROL
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC6 (SOFTWARE)
5: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:26 , ILE A:27 , HIS A:31 , TRP A:103 , PHE A:105 , LYS A:206 , ASN A:236 , HIS A:338 , ASN A:340 , HIS A:367 , ARG A:421
BINDING SITE FOR RESIDUE CIT A 501
2
AC2
SOFTWARE
ASN B:26 , HIS B:31 , TRP B:103 , PHE B:105 , PHE B:151 , LYS B:206 , ASN B:236 , HIS B:338 , ASN B:340 , HIS B:367 , ARG B:421
BINDING SITE FOR RESIDUE CIT B 501
3
AC5
SOFTWARE
ASN E:26 , HIS E:31 , LYS E:206 , ASN E:236 , HIS E:338 , ASN E:340 , HIS E:367
BINDING SITE FOR RESIDUE CIT E 501
4
AC6
SOFTWARE
GLY E:169 , ASN E:170 , HIS E:171
BINDING SITE FOR RESIDUE GOL E 502
5
AC7
SOFTWARE
ASN F:26 , ILE F:27 , HIS F:31 , TRP F:103 , PHE F:105 , PHE F:151 , LYS F:206 , ASN F:236 , HIS F:338 , ASN F:340 , HIS F:367 , ARG F:421
BINDING SITE FOR RESIDUE CIT F 501
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d4il0a1 (A:6-136)
1b: SCOP_d4il0b1 (B:6-136)
1c: SCOP_d4il0c1 (C:6-136)
1d: SCOP_d4il0d1 (D:6-136)
1e: SCOP_d4il0e1 (E:6-136)
1f: SCOP_d4il0f1 (F:7-136)
1g: SCOP_d4il0g1 (G:7-136)
1h: SCOP_d4il0h1 (H:6-136)
2a: SCOP_d4il0a2 (A:137-445)
2b: SCOP_d4il0b2 (B:137-445)
2c: SCOP_d4il0c2 (C:137-445)
2d: SCOP_d4il0d2 (D:137-445)
2e: SCOP_d4il0e2 (E:137-445)
2f: SCOP_d4il0f2 (F:137-445)
2g: SCOP_d4il0g2 (G:137-445)
2h: SCOP_d4il0h2 (H:137-445)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Enolase N-terminal domain-like
(211)
Superfamily
:
Enolase N-terminal domain-like
(211)
Family
:
automated matches
(123)
Protein domain
:
automated matches
(123)
Escherichia coli [TaxId: 511145]
(1)
1a
d4il0a1
A:6-136
1b
d4il0b1
B:6-136
1c
d4il0c1
C:6-136
1d
d4il0d1
D:6-136
1e
d4il0e1
E:6-136
1f
d4il0f1
F:7-136
1g
d4il0g1
G:7-136
1h
d4il0h1
H:6-136
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Enolase C-terminal domain-like
(212)
Family
:
automated matches
(102)
Protein domain
:
automated matches
(102)
Escherichia coli [TaxId: 511145]
(1)
2a
d4il0a2
A:137-445
2b
d4il0b2
B:137-445
2c
d4il0c2
C:137-445
2d
d4il0d2
D:137-445
2e
d4il0e2
E:137-445
2f
d4il0f2
F:137-445
2g
d4il0g2
G:137-445
2h
d4il0h2
H:137-445
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (1.1 MB)
Header - Asym.Unit
Biol.Unit 1 (554 KB)
Header - Biol.Unit 1
Biol.Unit 2 (544 KB)
Header - Biol.Unit 2
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