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4IJM
Asym. Unit
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Asym.Unit (506 KB)
Biol.Unit 1 (496 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CIRCADIAN CLOCK PROTEIN KAIC A422V MUTANT
Authors
:
M. Egli, R. Pattanayek
Date
:
21 Dec 12 (Deposition) - 13 Feb 13 (Release) - 06 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.35
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Atp Binding, Biological Rhythms, Auto-Kinase, Phosphorylation, Serine/Threonine-Protein Kinase, Transcription Regulation, Kaia, Kaib, Sasa, Circadian Clock Protein, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Egli, R. Pattanayek, J. H. Sheehan, Y. Xu, T. Mori, J. A. Smith, C. H. Johnson
Loop-Loop Interactions Regulate Kaia-Stimulated Kaic Phosphorylation In The Cyanobacterial Kaiabc Circadian Clock.
Biochemistry V. 52 1208 2013
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close entry info
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Hetero Components
(4, 33)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
1b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
1c: ADENOSINE-5'-TRIPHOSPHATE (ATPc)
1d: ADENOSINE-5'-TRIPHOSPHATE (ATPd)
1e: ADENOSINE-5'-TRIPHOSPHATE (ATPe)
1f: ADENOSINE-5'-TRIPHOSPHATE (ATPf)
1g: ADENOSINE-5'-TRIPHOSPHATE (ATPg)
1h: ADENOSINE-5'-TRIPHOSPHATE (ATPh)
1i: ADENOSINE-5'-TRIPHOSPHATE (ATPi)
1j: ADENOSINE-5'-TRIPHOSPHATE (ATPj)
1k: ADENOSINE-5'-TRIPHOSPHATE (ATPk)
1l: ADENOSINE-5'-TRIPHOSPHATE (ATPl)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
2f: MAGNESIUM ION (MGf)
2g: MAGNESIUM ION (MGg)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
3c: PHOSPHATE ION (PO4c)
3d: PHOSPHATE ION (PO4d)
3e: PHOSPHATE ION (PO4e)
3f: PHOSPHATE ION (PO4f)
3g: PHOSPHATE ION (PO4g)
3h: PHOSPHATE ION (PO4h)
4a: PHOSPHOTHREONINE (TPOa)
4b: PHOSPHOTHREONINE (TPOb)
4c: PHOSPHOTHREONINE (TPOc)
4d: PHOSPHOTHREONINE (TPOd)
4e: PHOSPHOTHREONINE (TPOe)
4f: PHOSPHOTHREONINE (TPOf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ATP
12
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
MG
7
Ligand/Ion
MAGNESIUM ION
3
PO4
8
Ligand/Ion
PHOSPHATE ION
4
TPO
6
Mod. Amino Acid
PHOSPHOTHREONINE
[
close Hetero Component info
]
Sites
(27, 27)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:295 , GLU A:319 , ATP A:802 , HOH A:902 , HOH A:950 , MG B:606
BINDING SITE FOR RESIDUE MG A 801
02
AC2
SOFTWARE
THR A:290 , GLY A:291 , THR A:292 , GLY A:293 , LYS A:294 , THR A:295 , LEU A:296 , GLU A:318 , TRP A:331 , ARG A:451 , ILE A:472 , MG A:801 , HOH A:902 , LYS B:457 , MET B:458 , ARG B:459 , GLY B:460 , SER B:461 , TRP B:462 , HIS B:463 , LYS B:465 , MG B:606
BINDING SITE FOR RESIDUE ATP A 802
03
AC3
SOFTWARE
GLY A:49 , THR A:50 , GLY A:51 , LYS A:52 , THR A:53 , LEU A:54 , SER A:89 , PHE A:90 , ARG A:218 , ILE A:239 , THR A:240 , ASP A:241 , HOH A:915 , HOH A:948 , LYS B:224 , ARG B:226 , THR B:228 , SER B:229 , HIS B:230 , HOH B:729
BINDING SITE FOR RESIDUE ATP A 803
04
AC4
SOFTWARE
LEU A:223 , LYS A:224 , ARG A:226 , THR A:228 , SER A:229 , HIS A:230 , LYS A:232 , HOH A:905 , GLY F:49 , THR F:50 , GLY F:51 , LYS F:52 , THR F:53 , LEU F:54 , SER F:89 , PHE F:90 , ILE F:239 , THR F:240 , ASP F:241 , HOH F:715
BINDING SITE FOR RESIDUE ATP A 804
05
AC5
SOFTWARE
THR B:295 , GLU B:318 , ATP B:602 , HOH B:720
BINDING SITE FOR RESIDUE MG B 601
06
AC6
SOFTWARE
THR B:290 , GLY B:291 , THR B:292 , GLY B:293 , LYS B:294 , THR B:295 , LEU B:296 , GLU B:318 , TRP B:331 , ARG B:451 , ILE B:472 , MG B:601 , HOH B:720 , LYS C:457 , MET C:458 , ARG C:459 , SER C:461 , TRP C:462 , HIS C:463 , LYS C:465
BINDING SITE FOR RESIDUE ATP B 602
07
AC7
SOFTWARE
GLY B:49 , THR B:50 , GLY B:51 , LYS B:52 , THR B:53 , LEU B:54 , SER B:89 , PHE B:90 , ILE B:239 , THR B:240 , ASP B:241 , HOH B:704 , LEU C:223 , LYS C:224 , LEU C:225 , ARG C:226 , THR C:228 , SER C:229 , HIS C:230
BINDING SITE FOR RESIDUE ATP B 603
08
AC8
SOFTWARE
ASP A:155 , TYR A:194 , SER B:157 , SER B:158
BINDING SITE FOR RESIDUE PO4 B 604
09
AC9
SOFTWARE
THR B:47 , GLU B:187 , ARG B:216 , HOH B:738 , ILE C:191
BINDING SITE FOR RESIDUE PO4 B 605
10
BC1
SOFTWARE
MG A:801 , ATP A:802 , ARG B:459
BINDING SITE FOR RESIDUE MG B 606
11
BC2
SOFTWARE
THR C:295 , GLU C:318 , GLU C:319 , ASP C:378 , ATP C:602
BINDING SITE FOR RESIDUE MG C 601
12
BC3
SOFTWARE
THR C:290 , GLY C:291 , GLY C:293 , LYS C:294 , THR C:295 , LEU C:296 , GLU C:318 , TRP C:331 , ARG C:451 , ILE C:472 , ASP C:474 , MG C:601 , HOH C:740 , TPO D:432 , LYS D:457 , MET D:458 , ARG D:459 , SER D:461 , TRP D:462 , HIS D:463 , LYS D:465
BINDING SITE FOR RESIDUE ATP C 602
13
BC4
SOFTWARE
GLY C:49 , THR C:50 , GLY C:51 , LYS C:52 , THR C:53 , LEU C:54 , SER C:89 , PHE C:90 , ILE C:239 , THR C:240 , ASP C:241 , HOH C:766 , HOH C:769 , PHE D:199 , LEU D:223 , LYS D:224 , ARG D:226 , THR D:228 , SER D:229 , HIS D:230
BINDING SITE FOR RESIDUE ATP C 603
14
BC5
SOFTWARE
GLU C:187 , ASN C:209 , ARG C:216 , ILE D:191
BINDING SITE FOR RESIDUE PO4 C 604
15
BC6
SOFTWARE
THR D:295 , GLU D:319 , ATP D:602 , HOH D:739
BINDING SITE FOR RESIDUE MG D 601
16
BC7
SOFTWARE
THR D:290 , GLY D:291 , GLY D:293 , LYS D:294 , THR D:295 , LEU D:296 , GLU D:318 , TRP D:331 , ARG D:451 , ILE D:472 , MG D:601 , HOH D:739 , LYS E:457 , MET E:458 , ARG E:459 , SER E:461 , TRP E:462 , HIS E:463 , LYS E:465
BINDING SITE FOR RESIDUE ATP D 602
17
BC8
SOFTWARE
GLY D:49 , THR D:50 , GLY D:51 , LYS D:52 , THR D:53 , LEU D:54 , GLU D:78 , SER D:89 , PHE D:90 , ILE D:239 , ASP D:241 , HOH D:703 , HOH D:716 , HOH D:729 , LEU E:223 , LYS E:224 , LEU E:225 , ARG E:226 , THR E:228 , SER E:229 , HIS E:230 , LYS E:232
BINDING SITE FOR RESIDUE ATP D 603
18
BC9
SOFTWARE
THR D:47 , GLU D:187 , ARG D:216 , ILE E:191
BINDING SITE FOR RESIDUE PO4 D 604
19
CC1
SOFTWARE
THR E:295 , GLU E:318 , ATP E:602 , HOH E:725
BINDING SITE FOR RESIDUE MG E 601
20
CC2
SOFTWARE
THR E:290 , GLY E:291 , THR E:292 , GLY E:293 , LYS E:294 , THR E:295 , LEU E:296 , GLU E:318 , TRP E:331 , ARG E:451 , ILE E:472 , MG E:601 , LYS F:457 , MET F:458 , ARG F:459 , SER F:461 , TRP F:462 , HIS F:463 , LYS F:465 , HOH F:708
BINDING SITE FOR RESIDUE ATP E 602
21
CC3
SOFTWARE
GLY E:49 , THR E:50 , GLY E:51 , LYS E:52 , THR E:53 , LEU E:54 , GLU E:78 , SER E:89 , PHE E:90 , ARG E:218 , ILE E:239 , ASP E:241 , HOH E:715 , LEU F:223 , LYS F:224 , ARG F:226 , THR F:228 , SER F:229 , HIS F:230 , LYS F:232
BINDING SITE FOR RESIDUE ATP E 603
22
CC4
SOFTWARE
PHE E:151 , GLN E:152 , TYR E:154 , ASP E:155 , SER F:157 , SER F:158
BINDING SITE FOR RESIDUE PO4 E 604
23
CC5
SOFTWARE
GLU E:187 , ARG E:216 , HOH E:712 , GLY F:189 , ILE F:191
BINDING SITE FOR RESIDUE PO4 E 605
24
CC6
SOFTWARE
THR F:295 , GLU F:318 , GLU F:319 , ASP F:378 , ATP F:602
BINDING SITE FOR RESIDUE MG F 601
25
CC7
SOFTWARE
LYS A:457 , MET A:458 , ARG A:459 , SER A:461 , TRP A:462 , HIS A:463 , LYS A:465 , THR F:290 , GLY F:291 , GLY F:293 , LYS F:294 , THR F:295 , LEU F:296 , GLU F:318 , SER F:330 , TRP F:331 , ARG F:451 , ILE F:472 , SER F:473 , ASP F:474 , MG F:601
BINDING SITE FOR RESIDUE ATP F 602
26
CC8
SOFTWARE
ILE A:191 , LEU A:223 , THR F:47 , GLU F:187 , ARG F:216
BINDING SITE FOR RESIDUE PO4 F 603
27
CC9
SOFTWARE
LYS A:232 , ARG F:218 , THR F:238 , ILE F:239
BINDING SITE FOR RESIDUE PO4 F 604
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
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Label:
Sorry, no Info available
[
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