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4IJC
Asym. Unit
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Asym.Unit (229 KB)
Biol.Unit 1 (225 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ARABINOSE DEHYDROGENASE ARA1 FROM SACCHAROMYCES CEREVISIAE
Authors
:
X. Q. Hu, P. C. Guo, W. F. Li, C. Z. Zhou
Date
:
21 Dec 12 (Deposition) - 27 Nov 13 (Release) - 27 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Beta Barrel, Tim Barrel, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
X. Q. Hu, P. C. Guo, J. D. Ma, W. F. Li
Structures Of Saccharomyces Cerevisiaed-Arabinose Dehydrogenase Ara1 And Its Complex With Nadph: Implications For Cofactor-Assisted Substrate Recognition
Acta Crystallogr. , Sect. F V. 69 1190 2013
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
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No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(5, 5)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:241 , SER A:245 , ARG A:285 , SO4 A:402 , HOH A:530 , HOH A:628
BINDING SITE FOR RESIDUE SO4 A 401
2
AC2
SOFTWARE
SER A:241 , PRO A:242 , LEU A:243 , GLY A:244 , ARG A:285 , SO4 A:401 , HOH A:629
BINDING SITE FOR RESIDUE SO4 A 402
3
AC3
SOFTWARE
VAL A:31 , ARG A:187 , HOH A:637 , HOH A:665 , LYS B:91 , HOH B:628
BINDING SITE FOR RESIDUE GOL A 403
4
AC4
SOFTWARE
SER B:241 , PRO B:242 , LEU B:243 , GLY B:244 , SER B:245 , ARG B:285 , SO4 B:402 , HOH B:552 , HOH B:592 , HOH B:634
BINDING SITE FOR RESIDUE SO4 B 401
5
AC5
SOFTWARE
SER B:241 , SER B:245 , ARG B:285 , SO4 B:401
BINDING SITE FOR RESIDUE SO4 B 402
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SAPs(SNPs)/Variants
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
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1a: SCOP_d4ijca_ (A:)
1b: SCOP_d4ijcb_ (B:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
NAD(P)-linked oxidoreductase
(286)
Family
:
automated matches
(35)
Protein domain
:
automated matches
(35)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
(2)
1a
d4ijca_
A:
1b
d4ijcb_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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