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4IHG
Asym. Unit
Info
Asym.Unit (1.1 MB)
Biol.Unit 1 (551 KB)
Biol.Unit 2 (535 KB)
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(1)
Title
:
CHASING ACYL CARRIER PROTEIN THROUGH A CATALYTIC CYCLE OF LIPID A PRODUCTION
Authors
:
A. Masoudi, C. R. H. Raetz, C. W. Pemble
Date
:
18 Dec 12 (Deposition) - 13 Nov 13 (Release) - 29 Jan 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.89
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,G,H,I (1x)
Biol. Unit 2: D,E,F,J,K,L (1x)
Keywords
:
Left Handed Beta Helix, Lpxd, Acyltransferase, Lipid A, Protein- Protein Complex, Acp Recognition Domain, Acp Mediated Product Release, Transferase-Lipid Binding Protein Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
A. Masoudi, C. R. Raetz, P. Zhou, C. W. Pemble
Chasing Acyl Carrier Protein Through A Catalytic Cycle Of Lipid A Production.
Nature V. 505 422 2014
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: 3-HYDROXY-TETRADECANOIC ACID (FTTa)
1b: 3-HYDROXY-TETRADECANOIC ACID (FTTb)
1c: 3-HYDROXY-TETRADECANOIC ACID (FTTc)
1d: 3-HYDROXY-TETRADECANOIC ACID (FTTd)
1e: 3-HYDROXY-TETRADECANOIC ACID (FTTe)
1f: 3-HYDROXY-TETRADECANOIC ACID (FTTf)
1g: 3-HYDROXY-TETRADECANOIC ACID (FTTg)
1h: 3-HYDROXY-TETRADECANOIC ACID (FTTh)
2a: 4'-PHOSPHOPANTETHEINE (PNSa)
2b: 4'-PHOSPHOPANTETHEINE (PNSb)
2c: 4'-PHOSPHOPANTETHEINE (PNSc)
2d: 4'-PHOSPHOPANTETHEINE (PNSd)
2e: 4'-PHOSPHOPANTETHEINE (PNSe)
2f: 4'-PHOSPHOPANTETHEINE (PNSf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FTT
8
Ligand/Ion
3-HYDROXY-TETRADECANOIC ACID
2
PNS
6
Ligand/Ion
4'-PHOSPHOPANTETHEINE
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:183 , ALA A:238 , HIS A:239 , ALA A:256 , GLY A:257 , VAL A:272 , ASP C:232 , PNS I:101
BINDING SITE FOR RESIDUE FTT A 401
02
AC2
SOFTWARE
ASP A:232 , GLY A:269 , GLY A:287 , PHE B:183 , ALA B:238 , HIS B:239 , ILE B:254 , MET B:255 , ALA B:256 , GLY B:257 , ASN B:274 , PNS G:101
BINDING SITE FOR RESIDUE FTT B 401
03
AC3
SOFTWARE
ALA B:248 , MET B:266 , ILE B:267 , GLY B:268 , THR B:284 , PHE C:183 , PNS H:101
BINDING SITE FOR RESIDUE FTT B 402
04
AC4
SOFTWARE
ASP B:232 , GLY B:269 , PHE C:183 , ALA C:238 , HIS C:239 , ILE C:254 , MET C:255 , GLY C:257 , VAL C:272 , HOH C:501 , PNS H:101
BINDING SITE FOR RESIDUE FTT C 401
05
AC5
SOFTWARE
PHE D:183 , GLN D:236 , HIS D:239 , ILE D:254 , MET D:255 , GLY D:257 , VAL D:272 , ILE D:273 , HOH D:511 , ASP F:232 , GLY F:269 , PNS L:101
BINDING SITE FOR RESIDUE FTT D 401
06
AC6
SOFTWARE
ASP D:232 , GLY D:269 , GLY D:287 , PHE E:183 , ALA E:238 , HIS E:239 , ILE E:254 , GLY E:257 , VAL E:272 , HOH E:532 , PNS J:101
BINDING SITE FOR RESIDUE FTT E 401
07
AC7
SOFTWARE
ALA D:248 , GLY D:268 , PHE E:183 , TYR E:185 , PNS J:101
BINDING SITE FOR RESIDUE FTT E 402
08
AC8
SOFTWARE
ASP E:232 , GLY E:251 , GLN F:236 , ALA F:238 , HIS F:239 , ILE F:254 , MET F:255 , ALA F:256 , GLY F:257 , ASN F:274 , MET F:290 , PNS K:101
BINDING SITE FOR RESIDUE FTT F 401
09
AC9
SOFTWARE
GLY A:269 , THR A:286 , GLY A:287 , FTT B:401 , ASN C:310 , ARG C:314 , SER G:36
BINDING SITE FOR RESIDUE PNS G 101
10
BC1
SOFTWARE
ASN A:310 , TRP A:313 , ARG A:314 , ALA B:250 , GLY B:268 , GLY B:269 , THR B:286 , GLY B:287 , FTT B:402 , ASN C:274 , FTT C:401 , SER H:36
BINDING SITE FOR RESIDUE PNS H 101
11
BC2
SOFTWARE
ASN A:274 , FTT A:401 , ASN B:310 , ARG B:314 , GLY C:269 , THR C:286 , GLY C:287 , SER I:36
BINDING SITE FOR RESIDUE PNS I 101
12
BC3
SOFTWARE
GLY D:268 , GLY D:269 , THR D:286 , GLY D:287 , PHE E:183 , MET E:292 , FTT E:401 , FTT E:402 , ASN F:310 , ARG F:314 , SER J:36
BINDING SITE FOR RESIDUE PNS J 101
13
BC4
SOFTWARE
ASN D:310 , ARG D:314 , GLY E:269 , THR E:286 , GLY E:287 , ASN F:274 , MET F:292 , FTT F:401 , SER K:36
BINDING SITE FOR RESIDUE PNS K 101
14
BC5
SOFTWARE
ASN D:274 , FTT D:401 , ASN E:310 , TRP E:313 , ARG E:314 , GLY F:269 , THR F:286 , GLY F:287 , SER L:36
BINDING SITE FOR RESIDUE PNS L 101
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 5)
Info
All SCOP Domains
1a: SCOP_d4ihgg_ (G:)
1b: SCOP_d4ihgh_ (H:)
1c: SCOP_d4ihgi_ (I:)
1d: SCOP_d4ihgj_ (J:)
1e: SCOP_d4ihgk_ (K:)
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Class
:
All alpha proteins
(14657)
Fold
:
Acyl carrier protein-like
(148)
Superfamily
:
ACP-like
(68)
Family
:
Acyl-carrier protein (ACP)
(40)
Protein domain
:
automated matches
(14)
Escherichia coli [TaxId: 885275]
(3)
1a
d4ihgg_
G:
1b
d4ihgh_
H:
1c
d4ihgi_
I:
1d
d4ihgj_
J:
1e
d4ihgk_
K:
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CATH Domains
(0, 0)
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Pfam Domains
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Chain K
Chain L
Asymmetric Unit 1
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select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Show PDB file:
Asym.Unit (1.1 MB)
Header - Asym.Unit
Biol.Unit 1 (551 KB)
Header - Biol.Unit 1
Biol.Unit 2 (535 KB)
Header - Biol.Unit 2
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