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4I7M
Asym. Unit
Info
Asym.Unit (124 KB)
Biol.Unit 1 (58 KB)
Biol.Unit 2 (63 KB)
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(1)
Title
:
T4 LYSOZYME L99A/M102H WITH 2-ALLYLPHENOL BOUND
Authors
:
M. Merski, B. K. Shoichet
Date
:
30 Nov 12 (Deposition) - 27 Mar 13 (Release) - 24 Apr 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.48
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Merski, B. K. Shoichet
The Impact Of Introducing A Histidine Into An Apolar Cavity Site On Docking And Ligand Recognition.
J. Med. Chem. V. 56 2874 2013
[
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Hetero Components
(5, 15)
Info
All Hetero Components
1a: 2-ALLYLPHENOL (2LPa)
1b: 2-ALLYLPHENOL (2LPb)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
3a: BETA-MERCAPTOETHANOL (BMEa)
3b: BETA-MERCAPTOETHANOL (BMEb)
3c: BETA-MERCAPTOETHANOL (BMEc)
3d: BETA-MERCAPTOETHANOL (BMEd)
4a: 2-HYDROXYETHYL DISULFIDE (HEDa)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
2LP
2
Ligand/Ion
2-ALLYLPHENOL
2
ACT
2
Ligand/Ion
ACETATE ION
3
BME
4
Ligand/Ion
BETA-MERCAPTOETHANOL
4
HED
1
Ligand/Ion
2-HYDROXYETHYL DISULFIDE
5
SO4
6
Ligand/Ion
SULFATE ION
[
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:3 , ALA A:93 , CYS A:97 , HOH A:311
BINDING SITE FOR RESIDUE BME A 201
02
AC2
SOFTWARE
ALA A:99 , HIS A:102 , VAL A:103 , VAL A:111 , LEU A:118 , LEU A:121 , PHE A:153
BINDING SITE FOR RESIDUE 2LP A 202
03
AC3
SOFTWARE
ARG A:14 , LEU A:15 , LYS A:16 , HOH A:316
BINDING SITE FOR RESIDUE SO4 A 203
04
AC4
SOFTWARE
ARG A:76 , ARG A:80 , HOH A:348 , LYS B:135
BINDING SITE FOR RESIDUE SO4 A 204
05
AC5
SOFTWARE
PHE A:-3 , MET A:1 , ILE A:9 , TYR A:161 , LEU A:164 , HOH A:309 , HOH B:397 , HOH B:440
BINDING SITE FOR RESIDUE BME A 205
06
AC6
SOFTWARE
THR A:109 , GLY A:110 , HOH A:423 , THR B:151 , ARG B:154 , HOH B:385
BINDING SITE FOR RESIDUE HED A 206
07
AC7
SOFTWARE
ARG A:119 , ARG A:125 , LYS B:48
BINDING SITE FOR RESIDUE SO4 B 201
08
AC8
SOFTWARE
ALA B:99 , HIS B:102 , VAL B:103 , VAL B:111 , LEU B:121 , PHE B:153
BINDING SITE FOR RESIDUE 2LP B 202
09
AC9
SOFTWARE
LYS A:135 , ARG B:80 , SO4 B:207 , HOH B:365
BINDING SITE FOR RESIDUE ACT B 203
10
BC1
SOFTWARE
THR A:151 , ARG A:154 , HOH A:387 , THR B:109 , HOH B:307
BINDING SITE FOR RESIDUE BME B 204
11
BC2
SOFTWARE
ILE B:3 , ALA B:93 , CYS B:97
BINDING SITE FOR RESIDUE BME B 205
12
BC3
SOFTWARE
ARG B:119 , ARG B:125
BINDING SITE FOR RESIDUE SO4 B 206
13
BC4
SOFTWARE
ARG B:80 , ACT B:203 , HOH B:366
BINDING SITE FOR RESIDUE SO4 B 207
14
BC5
SOFTWARE
GLY B:30 , HIS B:31 , LEU B:32 , ASP B:70 , PHE B:104 , HOH B:339 , HOH B:445
BINDING SITE FOR RESIDUE SO4 B 208
15
BC6
SOFTWARE
LEU B:15 , HOH B:435
BINDING SITE FOR RESIDUE ACT B 209
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4i7ma_ (A:)
1b: SCOP_d4i7mb_ (B:)
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Lysozyme-like
(1361)
Superfamily
:
Lysozyme-like
(1361)
Family
:
Phage lysozyme
(550)
Protein domain
:
Phage T4 lysozyme
(546)
Bacteriophage T4 [TaxId: 10665]
(546)
1a
d4i7ma_
A:
1b
d4i7mb_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (124 KB)
Header - Asym.Unit
Biol.Unit 1 (58 KB)
Header - Biol.Unit 1
Biol.Unit 2 (63 KB)
Header - Biol.Unit 2
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