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4I7K
Biol. Unit 2
Info
Asym.Unit (125 KB)
Biol.Unit 1 (57 KB)
Biol.Unit 2 (64 KB)
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Title
:
T4 LYSOZYME L99A/M102H WITH TOLUENE BOUND
Authors
:
M. Merski, B. K. Shoichet
Date
:
30 Nov 12 (Deposition) - 27 Mar 13 (Release) - 24 Apr 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.72
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Merski, B. K. Shoichet
The Impact Of Introducing A Histidine Into An Apolar Cavity Site On Docking And Ligand Recognition.
J. Med. Chem. V. 56 2874 2013
[
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
2a: BETA-MERCAPTOETHANOL (BMEa)
2b: BETA-MERCAPTOETHANOL (BMEb)
2c: BETA-MERCAPTOETHANOL (BMEc)
2d: BETA-MERCAPTOETHANOL (BMEd)
2e: BETA-MERCAPTOETHANOL (BMEe)
2f: BETA-MERCAPTOETHANOL (BMEf)
3a: 2-HYDROXYETHYL DISULFIDE (HEDa)
4a: TOLUENE (MBNa)
4b: TOLUENE (MBNb)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
3
Ligand/Ion
ACETATE ION
2
BME
4
Ligand/Ion
BETA-MERCAPTOETHANOL
3
HED
-1
Ligand/Ion
2-HYDROXYETHYL DISULFIDE
4
MBN
1
Ligand/Ion
TOLUENE
5
SO4
2
Ligand/Ion
SULFATE ION
[
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Sites
(15, 15)
Info
All Sites
01: AC4 (SOFTWARE)
02: AC5 (SOFTWARE)
03: AC6 (SOFTWARE)
04: AC7 (SOFTWARE)
05: AC8 (SOFTWARE)
06: AC9 (SOFTWARE)
07: BC1 (SOFTWARE)
08: BC2 (SOFTWARE)
09: BC3 (SOFTWARE)
10: BC4 (SOFTWARE)
11: BC5 (SOFTWARE)
12: BC6 (SOFTWARE)
13: BC7 (SOFTWARE)
14: BC8 (SOFTWARE)
15: BC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC4
SOFTWARE
ARG A:76 , ARG A:80 , HOH A:428 , LYS B:135
BINDING SITE FOR RESIDUE SO4 A 204
02
AC5
SOFTWARE
GLU A:5 , GLU A:64 , PHE A:67 , GLY B:51
BINDING SITE FOR RESIDUE ACT A 205
03
AC6
SOFTWARE
PHE A:-3 , ILE A:9 , TYR A:161 , LEU A:164 , HOH A:311 , ARG B:52 , ASN B:53 , HOH B:394
BINDING SITE FOR RESIDUE BME A 206
04
AC7
SOFTWARE
THR A:109 , GLY A:110 , GLY A:113 , THR B:151 , ARG B:154 , HOH B:376
BINDING SITE FOR RESIDUE HED A 207
05
AC8
SOFTWARE
ARG A:119 , ARG A:125 , LYS B:48
BINDING SITE FOR RESIDUE SO4 A 208
06
AC9
SOFTWARE
LYS A:135 , ARG B:76 , ARG B:80 , SO4 B:205 , HOH B:415
BINDING SITE FOR RESIDUE ACT B 201
07
BC1
SOFTWARE
ILE B:3 , CYS B:97 , ILE B:100
BINDING SITE FOR RESIDUE BME B 202
08
BC2
SOFTWARE
ILE B:3 , CYS B:97 , HOH B:399 , HOH B:400
BINDING SITE FOR RESIDUE BME B 203
09
BC3
SOFTWARE
VAL B:87 , TYR B:88 , ALA B:99 , HIS B:102 , VAL B:111 , LEU B:118 , LEU B:121 , PHE B:153
BINDING SITE FOR RESIDUE MBN B 204
10
BC4
SOFTWARE
ARG B:76 , ARG B:80 , ACT B:201 , HOH B:305
BINDING SITE FOR RESIDUE SO4 B 205
11
BC5
SOFTWARE
ARG B:119 , ARG B:125
BINDING SITE FOR RESIDUE SO4 B 206
12
BC6
SOFTWARE
LEU B:15 , LYS B:16
BINDING SITE FOR RESIDUE ACT B 207
13
BC7
SOFTWARE
GLU B:5 , ILE B:29 , GLU B:64 , HOH B:383
BINDING SITE FOR RESIDUE ACT B 208
14
BC8
SOFTWARE
GLY B:30 , HIS B:31 , LEU B:32 , ASP B:70 , PHE B:104
BINDING SITE FOR RESIDUE BME B 209
15
BC9
SOFTWARE
PHE B:114 , ASN B:116 , VAL B:117 , ASN B:132 , HOH B:407
BINDING SITE FOR RESIDUE BME B 210
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4i7ka_ (A:)
1b: SCOP_d4i7kb_ (B:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Lysozyme-like
(1361)
Superfamily
:
Lysozyme-like
(1361)
Family
:
Phage lysozyme
(550)
Protein domain
:
Phage T4 lysozyme
(546)
Bacteriophage T4 [TaxId: 10665]
(546)
1a
d4i7ka_
A:
1b
d4i7kb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (125 KB)
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Header - Biol.Unit 1
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