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4I52
Asym. Unit
Info
Asym.Unit (411 KB)
Biol.Unit 1 (138 KB)
Biol.Unit 2 (139 KB)
Biol.Unit 3 (139 KB)
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(1)
Title
:
SCMENB IM COMPLEX WITH 1-HYDROXY-2-NAPHTHOYL-COA
Authors
:
H. G. Song, Y. R. Sun, J. Li, Y. Li, M. Jiang, J. H. Zhou, Z. H. Guo
Date
:
28 Nov 12 (Deposition) - 08 May 13 (Release) - 19 Jun 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I
Biol. Unit 1: A,C,D (1x)
Biol. Unit 2: B,E,F (1x)
Biol. Unit 3: G,H,I (1x)
Keywords
:
Crotonase, 1, 4-Dihydroxy-2-Naphthoyl Coenzyme A Synthase, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Sun, H. Song, J. Li, Y. Li, M. Jiang, J. Zhou, Z. Guo
Structural Basis Of The Induced-Fit Mechanism Of 1, 4-Dihydroxy-2-Naphthoyl Coenzyme A Synthase From The Crotonase Fold Superfamily
Plos One V. 8 63095 2013
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Hetero Components
(2, 18)
Info
All Hetero Components
1a: 1-HYDROXY-2-NAPHTHOYL-COA (1HAa)
1b: 1-HYDROXY-2-NAPHTHOYL-COA (1HAb)
1c: 1-HYDROXY-2-NAPHTHOYL-COA (1HAc)
1d: 1-HYDROXY-2-NAPHTHOYL-COA (1HAd)
1e: 1-HYDROXY-2-NAPHTHOYL-COA (1HAe)
1f: 1-HYDROXY-2-NAPHTHOYL-COA (1HAf)
1g: 1-HYDROXY-2-NAPHTHOYL-COA (1HAg)
1h: 1-HYDROXY-2-NAPHTHOYL-COA (1HAh)
1i: 1-HYDROXY-2-NAPHTHOYL-COA (1HAi)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
2h: CHLORIDE ION (CLh)
2i: CHLORIDE ION (CLi)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1HA
9
Ligand/Ion
1-HYDROXY-2-NAPHTHOYL-COA
2
CL
9
Ligand/Ion
CHLORIDE ION
[
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Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:29 , LYS A:30 , ARG A:31 , ALA A:33 , SER A:75 , GLY A:76 , GLY A:77 , ASP A:78 , GLN A:79 , LEU A:96 , VAL A:98 , TYR A:119 , ILE A:121 , GLY A:123 , THR A:145 , VAL A:149 , SER A:151 , PHE A:152 , HOH A:420 , THR D:244 , PHE D:260 , LYS D:263
BINDING SITE FOR RESIDUE 1HA A 301
02
AC2
SOFTWARE
GLY A:122 , GLN A:144 , THR A:145 , GLY A:146 , TRP A:174 , HOH A:420
BINDING SITE FOR RESIDUE CL A 302
03
AC3
SOFTWARE
HIS B:29 , LYS B:30 , ARG B:31 , SER B:75 , GLY B:76 , GLY B:77 , ASP B:78 , GLN B:79 , TYR B:87 , VAL B:98 , TYR B:119 , ILE B:121 , GLY B:123 , THR B:145 , VAL B:149 , SER B:151 , PHE B:152 , THR I:244 , PHE I:260 , LYS I:263
BINDING SITE FOR RESIDUE 1HA B 301
04
AC4
SOFTWARE
GLY B:122 , GLN B:144 , THR B:145 , GLY B:146 , TRP B:174
BINDING SITE FOR RESIDUE CL B 302
05
AC5
SOFTWARE
HIS C:29 , LYS C:30 , ARG C:31 , ALA C:33 , SER C:75 , GLY C:76 , GLY C:77 , ASP C:78 , GLN C:79 , VAL C:98 , TYR C:119 , ILE C:121 , GLY C:123 , THR C:145 , VAL C:149 , SER C:151 , PHE C:152 , THR C:244 , PHE C:260 , CL C:302 , HOH C:431 , HOH C:445 , HOH C:448 , GLY F:92
BINDING SITE FOR RESIDUE 1HA C 301
06
AC6
SOFTWARE
GLY C:122 , GLN C:144 , THR C:145 , GLY C:146 , 1HA C:301
BINDING SITE FOR RESIDUE CL C 302
07
AC7
SOFTWARE
THR A:244 , PHE A:260 , LYS A:263 , HIS D:29 , LYS D:30 , ARG D:31 , ALA D:33 , SER D:75 , GLY D:76 , GLY D:77 , ASP D:78 , GLN D:79 , TYR D:87 , VAL D:98 , TYR D:119 , GLY D:123 , THR D:145 , VAL D:149 , SER D:151 , PHE D:152 , GLN D:179 , HOH D:429 , HOH D:432 , HOH D:466 , HOH D:473 , HOH D:481 , HOH D:482
BINDING SITE FOR RESIDUE 1HA D 301
08
AC8
SOFTWARE
GLY D:122 , GLN D:144 , THR D:145 , GLY D:146 , TRP D:174 , HOH D:429
BINDING SITE FOR RESIDUE CL D 302
09
AC9
SOFTWARE
HIS E:29 , LYS E:30 , ARG E:31 , SER E:75 , GLY E:76 , GLY E:77 , ASP E:78 , GLN E:79 , VAL E:98 , LEU E:99 , TYR E:119 , GLY E:123 , THR E:145 , VAL E:149 , SER E:151 , PHE E:152 , HOH E:429 , HOH E:441 , HOH E:444 , THR H:244 , PHE H:260 , LYS H:263
BINDING SITE FOR RESIDUE 1HA E 301
10
BC1
SOFTWARE
GLY E:122 , GLN E:144 , THR E:145 , GLY E:146 , TRP E:174
BINDING SITE FOR RESIDUE CL E 302
11
BC2
SOFTWARE
HIS F:29 , LYS F:30 , ARG F:31 , ALA F:33 , SER F:75 , GLY F:76 , GLY F:77 , ASP F:78 , GLN F:79 , VAL F:98 , TYR F:119 , GLY F:123 , THR F:145 , VAL F:149 , SER F:151 , PHE F:152 , CL F:302 , HOH F:434 , HOH F:435 , HOH F:442 , HOH F:466 , THR G:244 , PHE G:260 , LYS G:263 , HOH G:415
BINDING SITE FOR RESIDUE 1HA F 301
12
BC3
SOFTWARE
GLY F:122 , GLN F:144 , THR F:145 , GLY F:146 , TRP F:174 , 1HA F:301 , HOH F:434 , HOH F:442
BINDING SITE FOR RESIDUE CL F 302
13
BC4
SOFTWARE
THR F:244 , PHE F:260 , LYS F:263 , HIS G:29 , LYS G:30 , ARG G:31 , SER G:75 , GLY G:76 , GLY G:77 , ASP G:78 , GLN G:79 , TYR G:87 , LEU G:96 , VAL G:98 , TYR G:119 , ILE G:121 , GLY G:123 , THR G:145 , VAL G:149 , SER G:151 , PHE G:152 , HOH G:406 , HOH G:446 , GLN H:91
BINDING SITE FOR RESIDUE 1HA G 301
14
BC5
SOFTWARE
GLY G:122 , GLN G:144 , THR G:145 , GLY G:146 , TRP G:174
BINDING SITE FOR RESIDUE CL G 302
15
BC6
SOFTWARE
THR E:244 , PHE E:260 , LYS E:263 , HOH E:464 , HIS H:29 , LYS H:30 , ARG H:31 , ALA H:33 , SER H:75 , GLY H:76 , GLY H:77 , ASP H:78 , GLN H:79 , LEU H:96 , VAL H:98 , TYR H:119 , GLY H:123 , THR H:145 , VAL H:149 , SER H:151 , PHE H:152 , HOH H:404
BINDING SITE FOR RESIDUE 1HA H 301
16
BC7
SOFTWARE
GLY H:122 , GLN H:144 , THR H:145 , GLY H:146 , TRP H:174
BINDING SITE FOR RESIDUE CL H 302
17
BC8
SOFTWARE
THR B:244 , PHE B:260 , LYS B:263 , HIS I:29 , LYS I:30 , ARG I:31 , ALA I:33 , SER I:75 , GLY I:76 , GLY I:77 , ASP I:78 , GLN I:79 , VAL I:98 , TYR I:119 , ILE I:121 , GLY I:123 , THR I:145 , VAL I:149 , SER I:151 , PHE I:152 , HOH I:420 , HOH I:458 , HOH I:459
BINDING SITE FOR RESIDUE 1HA I 301
18
BC9
SOFTWARE
GLY I:122 , GLN I:144 , THR I:145 , GLY I:146 , TRP I:174
BINDING SITE FOR RESIDUE CL I 302
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 9)
Info
All SCOP Domains
1a: SCOP_d4i52a_ (A:)
1b: SCOP_d4i52b_ (B:)
1c: SCOP_d4i52c_ (C:)
1d: SCOP_d4i52d_ (D:)
1e: SCOP_d4i52e_ (E:)
1f: SCOP_d4i52f_ (F:)
1g: SCOP_d4i52g_ (G:)
1h: SCOP_d4i52h_ (H:)
1i: SCOP_d4i52i_ (I:)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ClpP/crotonase
(207)
Superfamily
:
ClpP/crotonase
(207)
Family
:
automated matches
(96)
Protein domain
:
automated matches
(96)
Synechocystis sp. [TaxId: 1111708]
(3)
1a
d4i52a_
A:
1b
d4i52b_
B:
1c
d4i52c_
C:
1d
d4i52d_
D:
1e
d4i52e_
E:
1f
d4i52f_
F:
1g
d4i52g_
G:
1h
d4i52h_
H:
1i
d4i52i_
I:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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Atom Selection
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Asymmetric Unit 1
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