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4HY0
Asym. Unit
Info
Asym.Unit (274 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (55 KB)
Biol.Unit 3 (74 KB)
Biol.Unit 4 (74 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF XIAP BIR3 WITH T3256336
Authors
:
G. S. Snell, D. R. Dougan
Date
:
12 Nov 12 (Deposition) - 30 Jan 13 (Release) - 07 Aug 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.84
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,H (1x)
Biol. Unit 3: D,E (1x)
Biol. Unit 4: F,G (1x)
Keywords
:
Bir3, Baculoviral Iap Repeat-Containing Protein 4, Apoptotic Suppressor. Inhibitor Of Caspase-3, -7 And -9. , Interacts With Smac And With Prss25, Xiap, Birc4, X-Linked Inhibitor Of Apoptosis, Ligase-Ligase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Hashimoto, B. Saito, N. Miyamoto, Y. Oguro, D. Tomita, Z. Shiokawa, M. Asano, H. Kakei, N. Taya, M. Kawasaki, H. Sumi, M. Yabuki, K. Iwai, S. Yoshida, M. Yoshimatsu, K. Aoyama, Y. Kosugi, T. Kojima, N. Morishita, D. R. Dougan, G. P. Snell, S. Imamura, T. Ishikawa
Design And Synthesis Of Potent Inhibitor Of Apoptosis (Iap) Proteins Antagonists Bearing An Octahydropyrrolo[1, 2-A]Pyrazine Scaffold As A Novel Proline Mimetic.
J. Med. Chem. V. 56 1228 2013
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close entry info
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Hetero Components
(2, 22)
Info
All Hetero Components
1a: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQa)
1b: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQb)
1c: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQc)
1d: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQd)
1e: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQe)
1f: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQf)
1g: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQg)
1h: (3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOR... (1AQh)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
2f: ZINC ION (ZNf)
2g: ZINC ION (ZNg)
2h: ZINC ION (ZNh)
2i: ZINC ION (ZNi)
2j: ZINC ION (ZNj)
2k: ZINC ION (ZNk)
2l: ZINC ION (ZNl)
2m: ZINC ION (ZNm)
2n: ZINC ION (ZNn)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1AQ
8
Ligand/Ion
(3S,7R,8AR)-2-{(2S)-2-(4,4-DIFLUOROCYCLOHEXYL)-2-[(N-METHYL-L-ALANYL)AMINO]ACETYL}-N-[(4R)-3,4-DIHYDRO-2H-CHROMEN-4-YL]-7-ETHOXYOCTAHYDROPYRROLO[1,2-A]PYRAZINE-3-CARBOXAMIDE
2
ZN
14
Ligand/Ion
ZINC ION
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:300 , CYS A:303 , HIS A:320 , CYS A:327
BINDING SITE FOR RESIDUE ZN A 401
02
AC2
SOFTWARE
LYS A:322 , HIS A:343 , HIS A:346 , HIS B:343
BINDING SITE FOR RESIDUE ZN A 402
03
AC3
SOFTWARE
LYS A:297 , GLY A:306 , LEU A:307 , THR A:308 , ASP A:309 , GLU A:314 , GLN A:319 , TRP A:323 , TYR A:324 , LEU B:348 , THR D:345 , LEU D:348 , GLU D:349
BINDING SITE FOR RESIDUE 1AQ A 403
04
AC4
SOFTWARE
CYS B:300 , CYS B:303 , HIS B:320 , CYS B:327
BINDING SITE FOR RESIDUE ZN B 401
05
AC5
SOFTWARE
HIS A:343 , LYS B:322 , HIS B:343 , HIS B:346
BINDING SITE FOR RESIDUE ZN B 402
06
AC6
SOFTWARE
LEU A:344 , LYS B:297 , GLY B:306 , LEU B:307 , THR B:308 , ASP B:309 , GLU B:314 , GLN B:319 , TRP B:323 , TYR B:324 , THR G:345 , LEU G:348 , GLU G:349
BINDING SITE FOR RESIDUE 1AQ B 403
07
AC7
SOFTWARE
CYS C:300 , CYS C:303 , HIS C:320 , CYS C:327
BINDING SITE FOR RESIDUE ZN C 401
08
AC8
SOFTWARE
LYS C:297 , GLY C:306 , LEU C:307 , THR C:308 , ASP C:309 , LYS C:311 , GLU C:314 , GLN C:319 , TRP C:323 , TYR C:324 , THR F:345 , LEU H:344
BINDING SITE FOR RESIDUE 1AQ C 402
09
AC9
SOFTWARE
CYS D:300 , CYS D:303 , HIS D:320 , CYS D:327
BINDING SITE FOR RESIDUE ZN D 401
10
BC1
SOFTWARE
LYS D:322 , HIS D:343 , HIS D:346 , HIS E:343
BINDING SITE FOR RESIDUE ZN D 402
11
BC2
SOFTWARE
THR C:345 , HIS C:346 , GLU C:349 , GLY D:306 , LEU D:307 , THR D:308 , ASP D:309 , GLU D:314 , TRP D:323 , TYR D:324 , HOH D:501
BINDING SITE FOR RESIDUE 1AQ D 403
12
BC3
SOFTWARE
CYS E:300 , CYS E:303 , HIS E:320 , CYS E:327
BINDING SITE FOR RESIDUE ZN E 401
13
BC4
SOFTWARE
HIS D:343 , LYS E:322 , HIS E:343 , HIS E:346
BINDING SITE FOR RESIDUE ZN E 402
14
BC5
SOFTWARE
THR B:345 , LEU B:348 , LEU E:292 , LYS E:297 , GLY E:306 , LEU E:307 , THR E:308 , ASP E:309 , GLU E:314 , GLN E:319 , TRP E:323 , TYR E:324
BINDING SITE FOR RESIDUE 1AQ E 403
15
BC6
SOFTWARE
CYS F:300 , CYS F:303 , HIS F:320 , CYS F:327
BINDING SITE FOR RESIDUE ZN F 401
16
BC7
SOFTWARE
LYS F:322 , HIS F:343 , HIS F:346 , HIS G:343
BINDING SITE FOR RESIDUE ZN F 402
17
BC8
SOFTWARE
THR A:345 , LEU A:348 , GLU A:349 , LEU F:292 , GLY F:306 , LEU F:307 , THR F:308 , ASP F:309 , GLU F:314 , GLN F:319 , TRP F:323 , TYR F:324
BINDING SITE FOR RESIDUE 1AQ F 403
18
BC9
SOFTWARE
CYS G:300 , CYS G:303 , HIS G:320 , CYS G:327
BINDING SITE FOR RESIDUE ZN G 401
19
CC1
SOFTWARE
HIS F:343 , LYS G:322 , HIS G:343 , HIS G:346
BINDING SITE FOR RESIDUE ZN G 402
20
CC2
SOFTWARE
LEU F:344 , LEU F:348 , LEU G:292 , LYS G:299 , GLY G:306 , LEU G:307 , THR G:308 , ASP G:309 , TRP G:310 , GLU G:314 , GLN G:319 , TRP G:323 , TYR G:324 , THR H:345 , LEU H:348 , GLU H:349
BINDING SITE FOR RESIDUE 1AQ G 403
21
CC3
SOFTWARE
CYS H:300 , CYS H:303 , HIS H:320 , CYS H:327
BINDING SITE FOR RESIDUE ZN H 401
22
CC4
SOFTWARE
LEU C:344 , LEU C:348 , THR E:345 , GLY H:306 , LEU H:307 , THR H:308 , ASP H:309 , GLU H:314 , GLN H:319 , TRP H:323 , TYR H:324
BINDING SITE FOR RESIDUE 1AQ H 402
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d4hy0a_ (A:)
1b: SCOP_d4hy0b_ (B:)
1c: SCOP_d4hy0c_ (C:)
1d: SCOP_d4hy0d_ (D:)
1e: SCOP_d4hy0e_ (E:)
1f: SCOP_d4hy0f_ (F:)
1g: SCOP_d4hy0g_ (G:)
1h: SCOP_d4hy0h_ (H:)
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Classes
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(
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(
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Protein Domains
(
)
(
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Organisms
(
)
(
)
Class
:
Small proteins
(3458)
Fold
:
Inhibitor of apoptosis (IAP) repeat
(71)
Superfamily
:
Inhibitor of apoptosis (IAP) repeat
(71)
Family
:
Inhibitor of apoptosis (IAP) repeat
(70)
Protein domain
:
automated matches
(24)
Human (Homo sapiens) [TaxId: 9606]
(24)
1a
d4hy0a_
A:
1b
d4hy0b_
B:
1c
d4hy0c_
C:
1d
d4hy0d_
D:
1e
d4hy0e_
E:
1f
d4hy0f_
F:
1g
d4hy0g_
G:
1h
d4hy0h_
H:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
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Chain H
Asymmetric Unit 1
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