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4HXF
Biol. Unit 1
Info
Asym.Unit (230 KB)
Biol.Unit 1, α-C (1.3 MB)
Biol.Unit 1 (1.3 MB)
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(1)
Title
:
ACYLAMINOACYL PEPTIDASE IN COMPLEX WITH Z-GLY-GLY-PHE-CHLOROMETHYL KETONE
Authors
:
A. Kiss-Szeman, D. K. Menyhard, E. Tichy-Racs, B. Hornung, K. Radi, Z. S K. Domokos, I. Szamosi, G. Naray-Szabo, L. Polgar, V. Harmat
Date
:
09 Nov 12 (Deposition) - 08 May 13 (Release) - 08 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : B
Biol. Unit 1: B (6x)
Keywords
:
Self-Compartmentalization, Beta-Propeller, Alpha/Beta Hyrdolase Fold, Hydrolase, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. K. Menyhard, A. Kiss-Szeman, E. Tichy-Racs, B. Hornung, K. Radi, Z. Szeltner, K. Domokos, I. Szamosi, G. Naray-Szabo, L. Polgar, V. Harmat
A Self-Compartmentalizing Hexamer Serine Protease From Pyrococcus Horikoshii: Substrate Selection Achieved Through Multimerization.
J. Biol. Chem. V. 288 17884 2013
(for further references see the
PDB file header
)
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Hetero Components
(2, 66)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: HEXANE-1,6-DIOL (HEZa)
2b: HEXANE-1,6-DIOL (HEZb)
2c: HEXANE-1,6-DIOL (HEZc)
2d: HEXANE-1,6-DIOL (HEZd)
2e: HEXANE-1,6-DIOL (HEZe)
2f: HEXANE-1,6-DIOL (HEZf)
2g: HEXANE-1,6-DIOL (HEZg)
2h: HEXANE-1,6-DIOL (HEZh)
2i: HEXANE-1,6-DIOL (HEZi)
2j: HEXANE-1,6-DIOL (HEZj)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
4a: N-[(BENZYLOXY)CARBONYL]GLYCYL-N-[(... (Y3Aa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
HEZ
60
Ligand/Ion
HEXANE-1,6-DIOL
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
Y3A
6
Ligand/Ion
N-[(BENZYLOXY)CARBONYL]GLYCYL-N-[(2S,3R)-4-CHLORO-3-HYDROXY-1-PHENYLBUTAN-2-YL]GLYCINAMIDE
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY B:386 , GLY B:387 , SER B:466 , TYR B:467 , PHE B:507 , ASP B:508 , ARG B:548 , HIS B:578 , HEZ B:710 , HEZ B:715 , HOH B:1455
BINDING SITE FOR RESIDUE Y3A B 701
02
AC2
SOFTWARE
ASP B:424 , HOH B:843 , HOH B:891 , HOH B:902 , HOH B:972 , HOH B:980
BINDING SITE FOR RESIDUE MG B 702
03
AC3
SOFTWARE
ASP B:244 , GLU B:263 , HOH B:862 , HOH B:865 , HOH B:975 , HOH B:978
BINDING SITE FOR RESIDUE MG B 703
04
AC4
SOFTWARE
HOH B:901 , HOH B:915 , HOH B:942 , HOH B:956 , HOH B:1028 , HOH B:1229
BINDING SITE FOR RESIDUE MG B 704
05
AC5
SOFTWARE
LYS B:99 , GLU B:162 , HOH B:849 , HOH B:876 , HOH B:976 , HOH B:977
BINDING SITE FOR RESIDUE MG B 705
06
AC6
SOFTWARE
GLU B:127 , HOH B:926 , HOH B:1106 , HOH B:1135 , HOH B:1272 , HOH B:1349
BINDING SITE FOR RESIDUE MG B 706
07
AC7
SOFTWARE
TYR B:239 , ASP B:424 , GLU B:431 , HOH B:908 , HOH B:972 , HOH B:984
BINDING SITE FOR RESIDUE HEZ B 707
08
AC8
SOFTWARE
ASP B:424 , GLU B:431 , ASN B:521 , HOH B:884 , HOH B:911
BINDING SITE FOR RESIDUE HEZ B 708
09
AC9
SOFTWARE
TYR B:220 , ILE B:222 , TYR B:232 , ALA B:265 , GLN B:266 , ALA B:267
BINDING SITE FOR RESIDUE HEZ B 709
10
BC1
SOFTWARE
TYR B:395 , LYS B:397 , HIS B:578 , Y3A B:701 , HOH B:1125 , HOH B:1403
BINDING SITE FOR RESIDUE HEZ B 710
11
BC2
SOFTWARE
ASP B:480 , LYS B:535 , HOH B:998
BINDING SITE FOR RESIDUE HEZ B 711
12
BC3
SOFTWARE
SER B:543 , LEU B:544 , ASP B:546 , PRO B:550 , LEU B:551 , HOH B:1336
BINDING SITE FOR RESIDUE HEZ B 712
13
BC4
SOFTWARE
GLU B:518 , ARG B:523 , PHE B:529 , TYR B:530 , LYS B:532
BINDING SITE FOR RESIDUE HEZ B 713
14
BC5
SOFTWARE
GLU B:350 , ARG B:352 , ILE B:368 , LYS B:369 , GLU B:452 , HOH B:1433
BINDING SITE FOR RESIDUE HEZ B 714
15
BC6
SOFTWARE
PHE B:197 , VAL B:240 , ARG B:548 , Y3A B:701 , HOH B:1133 , HOH B:1416
BINDING SITE FOR RESIDUE HEZ B 715
16
BC7
SOFTWARE
ILE B:260 , GLU B:280 , TYR B:287 , VAL B:293
BINDING SITE FOR RESIDUE HEZ B 716
17
BC8
SOFTWARE
ARG B:55 , HOH B:813 , HOH B:1182
BINDING SITE FOR RESIDUE CL B 717
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Chain B
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Asym.Unit (230 KB)
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