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4HWE
Asym. Unit
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Asym.Unit (147 KB)
Biol.Unit 1 (141 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ECTODOMAIN 3 OF THE IL-13 RECEPTOR ALPHA1 IN COMPLEX WITH A HUMAN NEUTRALIZING MONOCLONAL ANTIBODY FRAGMENT
Authors
:
Y. Xu
Date
:
07 Nov 12 (Deposition) - 27 Feb 13 (Release) - 24 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.43
Chains
:
Asym. Unit : H,L
Biol. Unit 1: H,L (1x)
Keywords
:
Fab, Fniii, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
N. T. Redpath, Y. Xu, N. J. Wilson, L. J. Fabri, M. Baca, A. E. Andrews, H. Braley, P. Lu, C. Ireland, R. E. Ernst, A. Woods, G. Forrest, Z. An, D. M. Zaller, W. R. Strohl, C. S. Luo, P. E. Czabotar, T. P. Garrett, D. J. Hilton, A. D. Nash, J. G. Zhang, N. A. Nicola
Crystal Structure Of Ectodomain 3 Of The Il-13 Receptor Alpha1 In Complex With A Human Neutralizing Monoclonal Antibody Fragment
Biochem. J. V. 451 165 2013
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
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No.
Name
Count
Type
Full Name
1
GOL
10
Ligand/Ion
GLYCEROL
2
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG H:60 , PRO H:63 , GLN H:66 , HOH H:427 , HOH L:425
BINDING SITE FOR RESIDUE SO4 H 301
02
AC2
SOFTWARE
SER H:8 , GLY H:9 , SER H:121 , THR H:122 , HOH H:507
BINDING SITE FOR RESIDUE SO4 H 302
03
AC3
SOFTWARE
LYS H:20 , GLN H:83 , HOH H:536
BINDING SITE FOR RESIDUE SO4 H 303
04
AC4
SOFTWARE
TYR H:28 , SER H:29 , TYR H:33 , GLY H:55 , LYS H:75
BINDING SITE FOR RESIDUE GOL H 304
05
AC5
SOFTWARE
TRP H:34 , ASP H:56 , TRP H:103
BINDING SITE FOR RESIDUE GOL H 305
06
AC6
SOFTWARE
TRP H:34 , MET H:100 , HOH H:513
BINDING SITE FOR RESIDUE GOL H 306
07
AC7
SOFTWARE
LYS H:88 , ALA H:89 , SER H:90
BINDING SITE FOR RESIDUE GOL H 307
08
AC8
SOFTWARE
ASN H:161 , GLN H:198 , HOH H:407 , HOH H:408 , HOH H:532
BINDING SITE FOR RESIDUE GOL H 308
09
AC9
SOFTWARE
LYS H:44 , GLY H:45 , GLU H:47 , GLN L:97 , GOL L:303
BINDING SITE FOR RESIDUE GOL H 309
10
BC1
SOFTWARE
ARG L:105 , SER L:111 , ASN L:135
BINDING SITE FOR RESIDUE SO4 L 301
11
BC2
SOFTWARE
ASP H:56 , TRP H:103 , ASP H:107 , HOH H:490 , HOH H:511 , TYR L:50 , ALA L:56 , THR L:57 , HOH L:439
BINDING SITE FOR RESIDUE GOL L 302
12
BC3
SOFTWARE
LEU H:46 , TRP H:48 , GOL H:309 , GLU L:93 , THR L:94 , PHE L:95
BINDING SITE FOR RESIDUE GOL L 303
13
BC4
SOFTWARE
PRO L:8 , GLY L:9 , THR L:10 , HOH L:482
BINDING SITE FOR RESIDUE GOL L 304
14
BC5
SOFTWARE
PHE H:172 , PRO H:173 , VAL H:175 , SER H:183 , LEU H:184 , SER H:185 , GLN L:157 , SER L:173 , SER L:174 , THR L:175
BINDING SITE FOR RESIDUE GOL L 305
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d4hwel2 (L:105-210)
2a: SCOP_d4hwel1 (L:1-104)
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)
Protein Domains
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)
Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
automated matches
(652)
Human (Homo sapiens) [TaxId: 9606]
(334)
1a
d4hwel2
L:105-210
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
automated matches
(311)
Human (Homo sapiens) [TaxId: 9606]
(85)
2a
d4hwel1
L:1-104
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (147 KB)
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