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4HV4
Biol. Unit 2
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Asym.Unit (319 KB)
Biol.Unit 1 (158 KB)
Biol.Unit 2 (158 KB)
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(1)
Title
:
2.25 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE (MURC) FROM YERSINIA PESTIS CO92 IN COMPLEX WITH AMP
Authors
:
A. S. Halavaty, G. Minasov, I. Dubrovska, J. Winsor, L. Shuvalova, S. Pe W. F. Anderson, Center For Structural Genomics Of Infectious D (Csgid)
Date
:
05 Nov 12 (Deposition) - 21 Nov 12 (Release) - 21 Nov 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Udp-N-Acetylmuramate-L-Alanine Ligase, Murc, Yersinia Pestis Co92, Peptidoglycan Synthesis, Center For Structural Genomics Of Infectious Diseases (Csgid), Niaid, National Institute Of Allergy And Infectious Diseases, Ligase
(Keyword Search:
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Reference
:
A. S. Halavaty, G. Minasov, I. Dubrovska, J. Winsor, L. Shuvalova, S. Peterson, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
2. 25 Angstrom Resolution Crystal Structure Of Udp-N-Acetylmuramate--L-Alanine Ligase (Murc) From Yersinia Pestis Co92 In Complex With Amp
To Be Published
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: ADENOSINE MONOPHOSPHATE (AMPa)
1b: ADENOSINE MONOPHOSPHATE (AMPb)
2a: BETA-MERCAPTOETHANOL (BMEa)
2b: BETA-MERCAPTOETHANOL (BMEb)
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No.
Name
Count
Type
Full Name
1
AMP
1
Ligand/Ion
ADENOSINE MONOPHOSPHATE
2
BME
1
Ligand/Ion
BETA-MERCAPTOETHANOL
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Sites
(2, 2)
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1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
HIS B:128 , GLY B:129 , LYS B:130 , THR B:131 , THR B:132 , ASN B:194 , HIS B:292 , ASN B:296 , ARG B:327 , ASP B:351 , TYR B:352 , GLY B:353 , GLU B:358 , THR B:362 , HOH B:664 , HOH B:701 , HOH B:703 , HOH B:727
BINDING SITE FOR RESIDUE AMP B 501
2
AC4
SOFTWARE
CYS B:426 , ARG B:430
BINDING SITE FOR RESIDUE BME B 502
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
(3, 6)
Info
All SCOP Domains
1a: SCOP_d4hv4a1 (A:19-107)
1b: SCOP_d4hv4b1 (B:15-107)
2a: SCOP_d4hv4a3 (A:323-483)
2b: SCOP_d4hv4b3 (B:323-483)
3a: SCOP_d4hv4a2 (A:108-322)
3b: SCOP_d4hv4b2 (B:108-322)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
MurCD N-terminal domain
(22)
Superfamily
:
MurCD N-terminal domain
(22)
Family
:
automated matches
(11)
Protein domain
:
automated matches
(11)
Yersinia pestis [TaxId: 214092]
(1)
1a
d4hv4a1
A:19-107
1b
d4hv4b1
B:15-107
Fold
:
MurD-like peptide ligases, peptide-binding domain
(32)
Superfamily
:
MurD-like peptide ligases, peptide-binding domain
(32)
Family
:
automated matches
(11)
Protein domain
:
automated matches
(11)
Yersinia pestis [TaxId: 214092]
(1)
2a
d4hv4a3
A:323-483
2b
d4hv4b3
B:323-483
Fold
:
Ribokinase-like
(226)
Superfamily
:
MurD-like peptide ligases, catalytic domain
(32)
Family
:
automated matches
(1)
Protein domain
:
automated matches
(1)
Yersinia pestis [TaxId: 214092]
(1)
3a
d4hv4a2
A:108-322
3b
d4hv4b2
B:108-322
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CATH Domains
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Pfam Domains
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