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4HQS
Asym. Unit
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Asym.Unit (55 KB)
Biol.Unit 1 (49 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE PNEUMOCCOCAL EXPOSED LIPOPROTEIN THIOREDOXIN SP_0659 (ETRX1) FROM STREPTOCOCCUS PNEUMONIAE STRAIN TIGR4
Authors
:
S. G. Bartual, M. Saleh, M. R. Abdullah, I. Jensch, T. M. Asmat, L. Petrus T. Pribyl, J. A. Hermoso, S. Hammerschmidt
Date
:
26 Oct 12 (Deposition) - 25 Dec 13 (Release) - 25 Dec 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.48
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Lipoprotein, Disulfide Bridge, Thiorredoxin, Membrane, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Saleh, S. G. Bartual, M. R. Abdullah, I. Jensch, T. M. Asmat, L. Petruschka, T. Pribyl, M. Gellert, C. H. Lillig, H. Antelmann, J. A. Hermoso, S. Hammerschmidt
Molecular Architecture Of Streptococcus Pneumoniae Surface Thioredoxin-Fold Lipoproteins Crucial For Extracellular Oxidative Stress Resistance And Maintenance Of Virulence.
Embo Mol Med V. 5 1852 2013
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
2f: MAGNESIUM ION (MGf)
2g: MAGNESIUM ION (MGg)
2h: MAGNESIUM ION (MGh)
2i: MAGNESIUM ION (MGi)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
5
Ligand/Ion
GLYCEROL
2
MG
9
Ligand/Ion
MAGNESIUM ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:162 , LYS A:163 , LEU A:187 , HOH A:441 , HOH A:470
BINDING SITE FOR RESIDUE GOL A 201
02
AC2
SOFTWARE
TRP A:83 , CYS A:84 , SER A:85 , ILE A:86 , TYR A:155 , HOH A:332 , HOH A:395
BINDING SITE FOR RESIDUE GOL A 202
03
AC3
SOFTWARE
ASP A:132 , LYS A:134 , ARG A:153 , GOL A:204 , HOH A:323 , HOH A:412 , HOH A:478 , HOH A:493
BINDING SITE FOR RESIDUE GOL A 203
04
AC4
SOFTWARE
LYS A:99 , LYS A:134 , ASN A:135 , GOL A:203 , HOH A:449 , HOH A:493
BINDING SITE FOR RESIDUE GOL A 204
05
AC5
SOFTWARE
TRP A:80 , VAL A:110 , VAL A:111 , SER A:112 , LEU A:147 , TYR A:155
BINDING SITE FOR RESIDUE MG A 205
06
AC6
SOFTWARE
PRO A:113 , SER A:120 , GLU A:121
BINDING SITE FOR RESIDUE MG A 206
07
AC7
SOFTWARE
LYS A:129 , HOH A:393 , HOH A:479
BINDING SITE FOR RESIDUE MG A 207
08
AC8
SOFTWARE
GLY A:62 , THR A:64 , GLY A:117 , GLU A:118 , GLN A:119 , MG A:209
BINDING SITE FOR RESIDUE MG A 208
09
AC9
SOFTWARE
GLY A:62 , SER A:82 , TRP A:83 , GLN A:119 , MG A:208 , HOH A:385
BINDING SITE FOR RESIDUE MG A 209
10
BC1
SOFTWARE
SER A:112 , HIS A:115 , LYS A:116 , GLU A:118 , TYR A:155 , HOH A:328
BINDING SITE FOR RESIDUE MG A 210
11
BC2
SOFTWARE
THR A:64 , TYR A:65 , GLY A:117 , HOH A:373 , HOH A:519
BINDING SITE FOR RESIDUE MG A 211
12
BC3
SOFTWARE
GLU A:176 , HOH A:436 , HOH A:497
BINDING SITE FOR RESIDUE MG A 212
13
BC4
SOFTWARE
SER A:82 , LEU A:88 , HOH A:385 , HOH A:404 , HOH A:521
BINDING SITE FOR RESIDUE MG A 213
14
BC5
SOFTWARE
TRP A:127 , GLY A:130 , GLU A:186 , HOH A:351 , HOH A:365
BINDING SITE FOR RESIDUE GOL A 214
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4hqsa_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
automated matches
(347)
Protein domain
:
automated matches
(347)
Streptococcus pneumoniae [TaxId: 170187]
(3)
1a
d4hqsa_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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all PFAM domains
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Chain A
Asymmetric Unit 1
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