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Asym. Unit
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Asym.Unit (272 KB)
Biol.Unit 1 (526 KB)
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(1)
Title
:
HIGH RESOLUTION CRYSTAL STRUCTURE OF GLUCOSE ISOMERASE FROM STREPTOMYCES SP. SK
Authors
:
H. Ben Hlima, J. Riguet, R. Haser, N. Aghajari
Date
:
10 Oct 12 (Deposition) - 27 Mar 13 (Release) - 13 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.73
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Tim-Barrel, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
H. Ben Hlima, S. Bejar, J. Riguet, R. Haser, N. Aghajari
Identification Of Critical Residues For The Activity And Thermostability Of Streptomyces Sp. Sk Glucose Isomerase.
Appl. Microbiol. Biotechnol. V. 97 9715 2013
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Hetero Components
(3, 18)
Info
All Hetero Components
1a: COBALT (II) ION (COa)
1b: COBALT (II) ION (COb)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CO
2
Ligand/Ion
COBALT (II) ION
2
EDO
13
Ligand/Ion
1,2-ETHANEDIOL
3
MG
3
Ligand/Ion
MAGNESIUM ION
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Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:217 , HIS A:220 , ASP A:255 , ASP A:257 , HOH A:1689 , HOH A:1690
BINDING SITE FOR RESIDUE CO A 401
02
AC2
SOFTWARE
GLU A:181 , GLU A:217 , ASP A:245 , ASP A:287 , HOH A:1565 , HOH A:1609
BINDING SITE FOR RESIDUE MG A 402
03
AC3
SOFTWARE
GLU A:67 , HIS A:71 , EDO A:405
BINDING SITE FOR RESIDUE MG A 403
04
AC4
SOFTWARE
LEU A:258 , ARG A:259 , PRO A:291 , GLU A:373 , ASP A:376 , HOH A:1705
BINDING SITE FOR RESIDUE EDO A 404
05
AC5
SOFTWARE
GLU A:67 , ALA A:70 , HIS A:71 , ARG A:74 , MG A:403 , HOH A:1662
BINDING SITE FOR RESIDUE EDO A 405
06
AC6
SOFTWARE
ARG A:321 , LEU A:330 , GLY B:146 , ALA B:147 , LYS B:149 , ASP B:150 , EDO B:405
BINDING SITE FOR RESIDUE EDO A 406
07
AC7
SOFTWARE
ALA A:201 , ARG A:205 , HOH A:1673 , GLN B:234 , TRP B:237 , ALA B:238
BINDING SITE FOR RESIDUE EDO A 407
08
AC8
SOFTWARE
ARG A:42 , GLU A:45
BINDING SITE FOR RESIDUE EDO A 408
09
AC9
SOFTWARE
ASP A:56 , PHE A:61 , ASN A:92 , THR A:95 , HIS A:96 , PHE A:99 , LYS A:118
BINDING SITE FOR RESIDUE EDO A 409
10
BC1
SOFTWARE
LEU A:58 , HIS A:71 , ARG A:74
BINDING SITE FOR RESIDUE EDO A 410
11
BC2
SOFTWARE
ARG A:334 , ALA A:365 , ARG A:368 , MET A:370 , PRO B:97 , VAL B:98 , ASP B:108
BINDING SITE FOR RESIDUE EDO A 411
12
BC3
SOFTWARE
GLU B:217 , HIS B:220 , ASP B:255 , ASP B:257 , HOH B:631 , HOH B:632
BINDING SITE FOR RESIDUE CO B 401
13
BC4
SOFTWARE
GLU B:181 , GLU B:217 , ASP B:245 , ASP B:287 , HOH B:527 , HOH B:604
BINDING SITE FOR RESIDUE MG B 402
14
BC5
SOFTWARE
ARG A:117 , LEU B:351 , ALA B:352 , ARG B:354 , GLU B:358
BINDING SITE FOR RESIDUE EDO B 403
15
BC6
SOFTWARE
GLY B:239 , LYS B:240 , LEU B:241 , TRP B:280 , HOH B:597
BINDING SITE FOR RESIDUE EDO B 404
16
BC7
SOFTWARE
ASP A:273 , SER A:277 , EDO A:406 , ASP B:150 , ARG B:152
BINDING SITE FOR RESIDUE EDO B 405
17
BC8
SOFTWARE
HIS A:230 , GLN A:234 , HOH A:1603 , LEU B:193 , PRO B:194
BINDING SITE FOR RESIDUE EDO B 406
18
BC9
SOFTWARE
ASP A:108 , ARG A:109 , ASP A:110 , GLN B:337 , ARG B:368 , HOH B:586
BINDING SITE FOR RESIDUE EDO B 407
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4hhla_ (A:)
1b: SCOP_d4hhlb_ (B:)
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Protein Domains
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Organisms
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)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Xylose isomerase-like
(125)
Family
:
Xylose isomerase
(97)
Protein domain
:
D-xylose isomerase
(82)
Streptomyces sp. [TaxId: 253732]
(2)
1a
d4hhla_
A:
1b
d4hhlb_
B:
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CATH Domains
(0, 0)
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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Asymmetric Unit 1
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