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4HF4
Asym. Unit
Info
Asym.Unit (229 KB)
Biol.Unit 1 (336 KB)
Biol.Unit 2 (326 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PDE10A WITH A BIARYL ETHER INHIBITOR (1-(1-(3-(4-(BENZO[D]THIAZOL-2-YLAMINO)PHENOXY)PYRAZIN-2-YL)PIPERIDIN-4-YL) ETHANOL)
Authors
:
S. Chmait, S. Jordan
Date
:
04 Oct 12 (Deposition) - 12 Dec 12 (Release) - 12 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (3x)
Biol. Unit 2: B (3x)
Keywords
:
Pde10A, Phosphodiesterase 10A, Biaryl Ethers, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. M. Rzasa, E. Hu, S. Rumfelt, N. Chen, K. L. Andrews, S. Chmait, J. R. Falsey, W. Zhong, A. D. Jones, A. Porter, S. W. Louie, X. Zhao, J. J. Treanor, J. R. Allen
Discovery Of Selective Biaryl Ethers As Pde10A Inhibitors: Improvement In Potency And Mitigation Of Pgp-Mediated Efflux.
Bioorg. Med. Chem. Lett. V. 22 7371 2012
[
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Hetero Components
(4, 22)
Info
All Hetero Components
1a: (1S)-1-(1-{3-[4-(1,3-BENZOTHIAZOL-... (15Ha)
1b: (1S)-1-(1-{3-[4-(1,3-BENZOTHIAZOL-... (15Hb)
2a: GLYCEROL (GOLa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
3m: SULFATE ION (SO4m)
3n: SULFATE ION (SO4n)
3o: SULFATE ION (SO4o)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
15H
2
Ligand/Ion
(1S)-1-(1-{3-[4-(1,3-BENZOTHIAZOL-2-YLAMINO)PHENOXY]PYRAZIN-2-YL}PIPERIDIN-4-YL)ETHANOL
2
GOL
1
Ligand/Ion
GLYCEROL
3
SO4
15
Ligand/Ion
SULFATE ION
4
ZN
4
Ligand/Ion
ZINC ION
[
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:519 , HIS A:553 , ASP A:554 , ASP A:664 , ZN A:1002 , HOH A:1103 , HOH A:1220
BINDING SITE FOR RESIDUE ZN A 1001
02
AC2
SOFTWARE
ASP A:554 , ZN A:1001 , HOH A:1107 , HOH A:1166 , HOH A:1185 , HOH A:1190 , HOH A:1220
BINDING SITE FOR RESIDUE ZN A 1002
03
AC3
SOFTWARE
PHE A:472 , GLU A:473 , ASN A:474 , ARG A:510 , ARG A:558 , HOH A:1296
BINDING SITE FOR RESIDUE SO4 A 1003
04
AC4
SOFTWARE
LYS A:497 , GLY A:597 , HIS A:598 , ASN A:599 , HOH A:1132
BINDING SITE FOR RESIDUE SO4 A 1004
05
AC5
SOFTWARE
VAL A:512 , PRO A:513 , ARG A:558 , GLY A:559 , GLU A:685 , ALA A:688
BINDING SITE FOR RESIDUE SO4 A 1005
06
AC6
SOFTWARE
LEU A:537 , LEU A:646 , ASN A:647 , ARG A:652 , LEU B:537 , ASN B:647 , ARG B:652
BINDING SITE FOR RESIDUE SO4 A 1006
07
AC7
SOFTWARE
ARG A:510 , ARG A:511
BINDING SITE FOR RESIDUE SO4 A 1007
08
AC8
SOFTWARE
LEU A:575 , TYR A:576 , SER A:577 , THR A:578 , GLN A:583
BINDING SITE FOR RESIDUE SO4 A 1008
09
AC9
SOFTWARE
ASN A:508 , GLN A:588 , SER A:591 , ILE A:592
BINDING SITE FOR RESIDUE SO4 A 1009
10
BC1
SOFTWARE
ARG A:486 , GLN A:532 , HIS A:535 , HOH A:1211 , HOH A:1276 , THR B:641 , GLY B:642
BINDING SITE FOR RESIDUE SO4 A 1010
11
BC2
SOFTWARE
SER A:650 , HIS A:651 , ARG A:654
BINDING SITE FOR RESIDUE GOL A 1011
12
BC3
SOFTWARE
TYR A:514 , LEU A:665 , VAL A:668 , ILE A:682 , TYR A:683 , PHE A:686 , PRO A:702 , MET A:703 , LYS A:708 , GLU A:711 , GLY A:715 , GLN A:716 , PHE A:719 , HOH A:1268 , HOH A:1290
BINDING SITE FOR RESIDUE 15H A 1012
13
BC4
SOFTWARE
HIS B:519 , HIS B:553 , ASP B:554 , ASP B:664 , ZN B:802 , HOH B:909 , HOH B:910
BINDING SITE FOR RESIDUE ZN B 801
14
BC5
SOFTWARE
ASP B:554 , ZN B:801 , HOH B:910 , HOH B:949 , HOH B:951 , HOH B:969 , HOH B:972
BINDING SITE FOR RESIDUE ZN B 802
15
BC6
SOFTWARE
PHE B:472 , GLU B:473 , ASN B:474 , ARG B:510 , ARG B:558 , HIS B:570 , HOH B:1055
BINDING SITE FOR RESIDUE SO4 B 803
16
BC7
SOFTWARE
ARG B:510 , ARG B:511 , HOH B:1176
BINDING SITE FOR RESIDUE SO4 B 804
17
BC8
SOFTWARE
PRO B:673 , GLY B:697 , ILE B:698 , GLN B:699 , HOH B:1001 , HOH B:1169
BINDING SITE FOR RESIDUE SO4 B 805
18
BC9
SOFTWARE
LYS B:497 , GLY B:597 , HIS B:598 , ASN B:599 , HOH B:1077 , HOH B:1078
BINDING SITE FOR RESIDUE SO4 B 806
19
CC1
SOFTWARE
ASN A:645 , THR B:539 , ASP B:540 , HOH B:1122
BINDING SITE FOR RESIDUE SO4 B 807
20
CC2
SOFTWARE
ASN B:508 , GLN B:588 , SER B:591 , ILE B:592
BINDING SITE FOR RESIDUE SO4 B 808
21
CC3
SOFTWARE
VAL B:512 , PRO B:513 , ARG B:558 , GLY B:559 , GLU B:685 , ALA B:688
BINDING SITE FOR RESIDUE SO4 B 809
22
CC4
SOFTWARE
ASP B:664 , LEU B:665 , SER B:667 , VAL B:668 , ILE B:682 , TYR B:683 , PHE B:686 , PRO B:702 , MET B:703 , LYS B:708 , GLU B:711 , VAL B:712 , GLY B:715 , GLN B:716 , PHE B:719 , HOH B:1041
BINDING SITE FOR RESIDUE 15H B 810
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4hf4a_ (A:)
1b: SCOP_d4hf4b_ (B:)
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Protein Domains
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Organisms
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
HD-domain/PDEase-like
(204)
Superfamily
:
HD-domain/PDEase-like
(204)
Family
:
automated matches
(60)
Protein domain
:
automated matches
(60)
Human (Homo sapiens) [TaxId: 9606]
(44)
1a
d4hf4a_
A:
1b
d4hf4b_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
set fontsize 20
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show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
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Show PDB file:
Asym.Unit (229 KB)
Header - Asym.Unit
Biol.Unit 1 (336 KB)
Header - Biol.Unit 1
Biol.Unit 2 (326 KB)
Header - Biol.Unit 2
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