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4HEU
Biol. Unit 2
Info
Asym.Unit (227 KB)
Biol.Unit 1 (334 KB)
Biol.Unit 2 (324 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PDE10A WITH A BIARYL ETHER INHIBITOR ((1-(3-(4-((1H-BENZO[D]IMIDAZOL-2-YL)AMINO)PHENOXY)PYRIDIN-2-YL)PIPERIDIN-4-YL)METHANOL)
Authors
:
S. Chmait, S. Jordan
Date
:
04 Oct 12 (Deposition) - 12 Dec 12 (Release) - 12 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (3x)
Biol. Unit 2: B (3x)
Keywords
:
Pde10A, Inhibitors, Phosphodiesterase 10A, Biaryl Ethers, Hydrolase- Hydrolase Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
R. M. Rzasa, E. Hu, S. Rumfelt, N. Chen, K. L. Andrews, S. Chmait, J. R. Falsey, W. Zhong, A. D. Jones, A. Porter, S. W. Louie, X. Zhao, J. J. Treanor, J. R. Allen
Discovery Of Selective Biaryl Ethers As Pde10A Inhibitors: Improvement In Potency And Mitigation Of Pgp-Mediated Efflux.
Bioorg. Med. Chem. Lett. V. 22 7371 2012
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Hetero Components
(2, 21)
Info
All Hetero Components
1a: (1-{3-[4-(1H-BENZIMIDAZOL-2-YLAMIN... (15Ja)
1b: (1-{3-[4-(1H-BENZIMIDAZOL-2-YLAMIN... (15Jb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
2j: SULFATE ION (SO4j)
2k: SULFATE ION (SO4k)
2l: SULFATE ION (SO4l)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
View:
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No.
Name
Count
Type
Full Name
1
15J
3
Ligand/Ion
(1-{3-[4-(1H-BENZIMIDAZOL-2-YLAMINO)PHENOXY]PYRIDIN-2-YL}PIPERIDIN-4-YL)METHANOL
2
SO4
18
Ligand/Ion
SULFATE ION
3
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(10, 10)
Info
All Sites
01: AC6 (SOFTWARE)
02: BC1 (SOFTWARE)
03: BC2 (SOFTWARE)
04: BC3 (SOFTWARE)
05: BC4 (SOFTWARE)
06: BC5 (SOFTWARE)
07: BC6 (SOFTWARE)
08: BC7 (SOFTWARE)
09: BC8 (SOFTWARE)
10: BC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC6
SOFTWARE
LEU A:537 , LEU A:646 , ASN A:647 , ARG A:652 , LEU B:646 , ARG B:652
BINDING SITE FOR RESIDUE SO4 A 1006
02
BC1
SOFTWARE
HIS B:519 , HIS B:553 , ASP B:554 , ASP B:664 , ZN B:802 , HOH B:901 , HOH B:956
BINDING SITE FOR RESIDUE ZN B 801
03
BC2
SOFTWARE
ASP B:554 , ZN B:801 , HOH B:901 , HOH B:943 , HOH B:955 , HOH B:958 , HOH B:959
BINDING SITE FOR RESIDUE ZN B 802
04
BC3
SOFTWARE
PHE B:472 , GLU B:473 , ASN B:474 , ARG B:510 , ARG B:558 , HIS B:570 , HOH B:909 , HOH B:946
BINDING SITE FOR RESIDUE SO4 B 803
05
BC4
SOFTWARE
ARG B:510 , ARG B:511 , HOH B:978 , HOH B:992
BINDING SITE FOR RESIDUE SO4 B 804
06
BC5
SOFTWARE
PRO B:673 , LYS B:694 , GLY B:697 , ILE B:698 , GLN B:699
BINDING SITE FOR RESIDUE SO4 B 805
07
BC6
SOFTWARE
PRO B:673 , LYS B:676 , LYS B:694
BINDING SITE FOR RESIDUE SO4 B 806
08
BC7
SOFTWARE
LYS B:497 , GLY B:597 , HIS B:598 , ASN B:599 , HOH B:1036 , HOH B:1085
BINDING SITE FOR RESIDUE SO4 B 807
09
BC8
SOFTWARE
ASN A:645 , THR B:539 , ASP B:540 , HOH B:1030
BINDING SITE FOR RESIDUE SO4 B 808
10
BC9
SOFTWARE
TYR B:514 , LEU B:665 , THR B:675 , ALA B:679 , ILE B:682 , TYR B:683 , PHE B:686 , PRO B:702 , MET B:703 , LYS B:708 , GLU B:711 , GLY B:715 , GLN B:716 , PHE B:719 , HOH B:910 , HOH B:961
BINDING SITE FOR RESIDUE 15J B 809
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4heua_ (A:)
1b: SCOP_d4heub_ (B:)
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Class
:
All alpha proteins
(14657)
Fold
:
HD-domain/PDEase-like
(204)
Superfamily
:
HD-domain/PDEase-like
(204)
Family
:
automated matches
(60)
Protein domain
:
automated matches
(60)
Human (Homo sapiens) [TaxId: 9606]
(44)
1a
d4heua_
A:
1b
d4heub_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asym.Unit (227 KB)
Header - Asym.Unit
Biol.Unit 1 (334 KB)
Header - Biol.Unit 1
Biol.Unit 2 (324 KB)
Header - Biol.Unit 2
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